Array 1 58256-59567 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVBA010000014.1 Anaerococcus faecalis strain AGMB00486 AGMB00486_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 58256 32 100.0 34 ................................ TATATTATATACACTATTTGTGAATATGTAAATA 58322 32 100.0 37 ................................ GTTAATGAAGTTTGCTTTTTGTGTTCTTCCCAAGCTG 58391 32 100.0 34 ................................ TATAAAGGAGTTCTTTACAGGATAAACCCTATTT 58457 32 100.0 34 ................................ TGGTAAGGATAAGGAAGGCTGGAGTTTTGGAGAA 58523 32 100.0 35 ................................ TCAGCAAGCTTATTCCAAACAACAATACGTGGAAA 58590 32 100.0 36 ................................ TATTTGGTTTACTTCTATTTGGTTTATTTCATATGT 58658 32 100.0 36 ................................ CATTGGAATAGCAATATAATAGCCTTGTTTACCCTC 58726 32 100.0 36 ................................ TTTCTATATAGATATTATACAATATTTTATTGATAA 58794 32 100.0 35 ................................ AATGAACACGCAAAAAGACGAGAGGCACTAACTCC 58861 32 100.0 35 ................................ AACCCACAGAGCCTTGCACTCTGCCGCCTAAATTG 58928 32 100.0 37 ................................ CATTTGGTCAACAACATCTTGCAAGTCTGTATATACT 58997 32 100.0 36 ................................ TCTTAACTTTTTAAGTCGTGTGCCTACCGTCATATT 59065 32 100.0 36 ................................ AGAGAAAAAATTGTTATAAAAATATAAAACAATTAG 59133 32 100.0 36 ................................ ATATGATGATTTGTATGATTTTATAGATGACAGACA 59201 32 100.0 34 ................................ ATCATGATACTAATAATATTGCTTATTATAATAA 59267 32 100.0 37 ................................ GAAAAATTTGGAGGATGATATGGATTTTTTAATAAAG 59336 32 100.0 35 ................................ GATATTAATGATTATGCTGAAGATTTTAAACTTGT 59403 32 100.0 35 ................................ TTTTCTTGATACTATACCTAACATTTAGATTTTGG 59470 32 100.0 34 ................................ CATTAAGATAAGCCTTTTGTGTAGCCATCTCAAG 59536 32 96.9 0 .......T........................ | ========== ====== ====== ====== ================================ ===================================== ================== 20 32 99.8 35 GTCACTCCCTTCATGGGAGTGTGGATTGAAAT # Left flank : TACTAGCACATGTTCAAGCTCAATTATTAAATAGCTACATTAGAGGAGATATAGAATCCTACCCTCCTTATATGAGGAAATGAAATGCAAATATTAATAACATATGACGTAAAAACATCAAGTAAGGGTGGAAGCAGAAGATTAAGACAAGTTGCAAAAATCTGTACAAACTATGGACAAAGAGTTCAAAATTCAGTATTTGAACTTAATATATATCCTGCAGACTTGGTGAAGATAAAAAACAAACTAGAAAAAGTGATAGATCTAGAAGAAGATAGTATAAGAATATATAATTTGGGGAAAAATTGGGAAAGAAGAGTAGAATCTATAGGAAAAGATGAAGCCTATAATCCTGAGAAGGATTTATTAATAATGTGAGAAGTTTGGCTTAACATAAAAATATTAAACATATCTCATAAAAAACTTTATATATATTATAATTTTAAGATTATAATGTATTCTTGCAGATAAGAAGGCTCGAAGAATGCCTGAAATCTGCA # Right flank : TTTTTGTTTGTTGTATGATATTTTTTAAAAAATTATCTATATTTAATAAGAAACATATGATATATAAGAAAAGTATTATACTATATAGTGAAAGATAAAATATTTAGTCTTAGCTTTAAACTGTAAAGAATAGTATTAGGTAATTAGTAAGCTAATTTTATATAAAAATAATTTTAATCATCAAATTAAAGGCAAATGAAAAGATATTTAAATGACTTATTCCTCCTTATATAATATAATTAGGTTGTTAAAGGTAACCTATAACCCTTTAATTACTTAATATTATTCAGTTTAGCTGTATAATATTTGTATTAGATAGAGGCACTCGTTTTATCCTTGAGATTTTATCTCGTAAAAAAGAGTGAGTCCTCTTATCTTTTAACTGTTTACGAATAAGTTAGATGTTGACTGGTTTCCAGTAATTCGTATCTCCCATAAGGCAGTAACGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCATGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //