Array 1 993466-993018 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUTV01000001.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 993465 28 100.0 32 ............................ GGTTTTCAGAAAGTACGGCGGTGAGTTGCCTG 993405 28 100.0 32 ............................ AGAGCTAAATACGCAGCAAACATGGCATATTT 993345 28 100.0 33 ............................ CGATCAAGATAAGCAGCTGCTAATAGATAAAGC 993284 28 100.0 32 ............................ GTTTCAGGGGTTGACCTTTGGTCAATAGAAAA 993224 28 100.0 32 ............................ TAAACACCGTCAGTGGAAAGCCCGGGATATCT 993164 28 100.0 32 ............................ CAATTGAGGAAAACGTCTTCACCAATGGTTAC 993104 28 96.4 31 ...........................G ATGGGCGGCGGTGCCACAGCCGCACTAGGTG 993045 28 71.4 0 CAA....A.........T...A..A..A | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.0 32 GTGACCTGCCGTGCAGGCAGTTGAGAAC # Left flank : TGCAGAAGCTTAAAAAGTTTTTCTTCCACGAGATCATCACGGTACCTGACAACCTTCCGGAAGTTCGATATTGCAAAGATCAAAAGAGTGATAAATATTGTGCCGGCGGCAGGCAACGTCGCATAAGGCGTGGGCAGCGTATAGCTGAAAAAAAGGGGTATGCGTATCAACCTCGTTATGACCCATCAAACAATGAGCGAACAATACAGCTGTTTCACAAAATTCCGATGACGAGTTCTGAGAACCCCGCACAGGTCTTTTACTACCGGGTTCAGAGGCATGAGACTAATAATATAAGTTGTGGTGGATATACCAGTTATGGTTTAGCGAATCAGCAAGAAGCCAAGGGTACAGTGCCCGAGCTGGTTTTTACCAATTTTTGACTGCTACCTGTAATTTATTGTTTTCCATAGAAGTTTTTGAACGTTAAAAATAATGGTTTTTTAGATAATTCTGACCTAGTCTCAACTCGTGTGTACGTTGTGGCTTCTCTTGTTCTA # Right flank : CACCCTCATCAGAGTTACCTGATGAGGGTGTTTTTTATGCTCAAAAAAATGTCATGAATTGAAGGTTAAATTAAATAATTGTCATAAAGTGAAAGTAATTTCTCTGACAAATTACAAAGTAGATCGTCTGCAGCCCCCATTCTTATTGATAACTATTTGTCAAAAAGTGGAAGTGCCGACATGAGTGTTGCTGCTTTAAATTTTGATTTAATACGGTATTAGCCTTCATACGACGACGGTTTGCGTAAAAAGACCTCGGAAACAAAACGTCATCTGTTGTTACCGAGGTTTTTTATTGGCGGTAGAAAGTCCGCCGCATCTCCTAAGTACTCGATAATATGATCGGGTACTTAGCCCGGATATTTCATAAAACCAAGCAGGTTCCGCCCAATCACTTGATATGATTGGGTCGACAAAAAGAAAGCTTCGGAAGAAGCAAACCGGAACCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCTGCCGTGCAGGCAGTTGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 377402-377608 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUTV01000003.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================= ================== 377402 27 96.3 33 ........G.................. TAACACCCCTTATCCAACCGCACTTCCCGCAAT 377462 27 100.0 33 ........................... TTTGACCTGGAACCGGAGAATCCGTCACCAGAA 377522 27 100.0 33 ........................... TTCAAGGGGTGCTAGACGGGGAGTGCGTTATGT 377582 27 81.5 0 .....................CCCTC. | ========== ====== ====== ====== =========================== ================================= ================== 4 27 94.5 33 CCTCACTGCCGCATACGCAGCTGAAAA # Left flank : ATCCTATCAATCATCAGAAAGTGATTTTTTTAAAGAATCAGAAAATCACCAGCAATACGCCTAAACGCCAGCAAGGAAAGATCAAACGGATAATAAAAAGGCAGATAGAGAGAGGTGAAATTCAAAGTGCCAGAGAGTATCGACCCAGAACAGATCAACAACAGACTGACATGCCAGACGTCTTCTACCATCTTTTTTTTCTTGATAGTAAGAGCACTGAGCAGATTATGCCACTCTGCATTCAAATGATACCAGTCGCTGAGAGTGAAGGAATAGTCGGTACTCAGACCTTTGATCACTATGGATTCAGCACACTTGAGCAACATCGTGCGGTAGTGCCTCTGATTTCACCAATATTTTAACAGGCTTGTCTTGAGTTGTTTTTGTTATTTAATTTCAATGGGTTACTGCGTAGCCTTGCTTGGTTCATAAATGATGGTTTTTCACCAGGTAGGAGGATAAGTATCCATGTTTCAATAAGTTATATTACAGTTGTTCTA # Right flank : AACTCTGTAGTTCTATTCTTAAGGTCATGGAAAGATAAAAAGGTCAGCATGGATGCTGCTACTCTCAAGACCAACACCCAACAAGCTTGAAAGCCTGAGAGGCTATATCCTCCGTTTATCGCAAGCAAATAGCTACCATACAACCCAGTATGTTTTAGAGCTGGCAGACCTTTGGACTGGTAGAAACTATGATACTGCCAGCAAGTACGTTTTTGGTGATAGCAACTTGAGTAAGTTGGCAAAGATCACCAACACTTCCAAGGGAGAGTTGGAAGCTTTACGGTACGGGCTTGATGACCAAAAACAGTCGAGTATTCATGGCCATCTAATTAGTAATGAGCATTTGAGGCTGGATTACCCACGAGTCTGTCCTGAGTGTCTTGAGTCCAACAATATAGCTCTCGCTGTATGGGATATTCCGGCACTGACTGTTTGCCCTGTGCATCACATGAGTCTTTTTGATTATTGTCCTGAATGCAATACCCGTCTTCGTTGGAATC # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCACTGCCGCATACGCAGCTGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //