Array 1 677576-676694 **** Predicted by CRISPRDetect 2.4 *** >NZ_MECJ01000028.1 Streptomyces sp. CBMA152 CBMA152_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 677575 29 100.0 32 ............................. TGTCCGCCGGGGCTTTTCGCGTGTGAGTACGG 677514 29 96.6 32 ............................A CAGCCCGGCGGACGGGCGGAGTCCGTGGCCGG 677453 29 100.0 32 ............................. GCACGGAAGCGAACATCAACGCCCTAGACCGC 677392 29 100.0 32 ............................. AGGATCATGCGGGACGGGACGATCATTGACCC 677331 29 100.0 32 ............................. CTCCGGGACCTGATGCGCCAGTCCAAGGTGTT 677270 29 100.0 32 ............................. GTCGGCCCGTGGGTCCAGGAGCAGCGGCGGTA 677209 29 100.0 32 ............................. TCGGCCAACTCGTTCTCCGAGATCGGGCGTGA 677148 29 96.6 32 ...G......................... CCGAGCTTCGAGCCCACCTTGCCGATGGCCTT 677087 29 96.6 32 ...G......................... AAGAGTTGGCCATTGGTGAAGCGCAGCGCGCA 677026 29 96.6 32 ...G......................... TAACGGCTTTTGGGTGGGTATCGGCTTTGCCT 676965 29 89.7 31 ...G........G...............G CGGTGGCCGGCGCCTCCGCGTACCACGTCTA 676905 29 93.1 32 ...G........G................ ATGGAGTACGCCACGACCGGTACCCCCAGCGG 676844 29 93.1 32 ...G........T................ ATGAACACCCTTCAGCGGTGGACCGAGCAGAA 676783 29 93.1 32 ...G........T................ TCAAAATCGCGCAATTGTTCGAACGAGCGGCA 676722 29 93.1 0 ...G........T................ | ========== ====== ====== ====== ============================= ================================ ================== 15 29 96.6 32 GTGATCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TACGGGAATCCCCGGCGCTGGCCGTCGCGGCGCTGCTGCACCGGCGCGGCGCGCAGGTCACCGTTCACGACCCGCACGCCGTCCGCACGGCCCTCGCGCGGCACCCCGAACTCGACTACACCGAGGGCCTGGACGAGTCCGCGCGCGGTGCCGAGCTGATCGTGGTCGCCACGGAATGGCCTGAGTTCCGGGCGGCCGACCCCAAGGCTCTGGGTCGTGTCGTCGCAGCCCCGGTTGTGGTGGACCTGCGGAACGTCCTGTGCGCGGACGCGTGGCGGGTGGCGGGATGGAGGGTGCGCCAGCTGGGCCGCCCGGCCCTGACCTGAGCCCCGCGAACCGGCCCCGGAGGAAGGCCTGGGCACACTAGCCTGTGGCCGACACCCGGGCAGGGCTGCGGGGTTGACCTCTTGGGGGATGTGAGGGGGATGGGGTGTATGCCGGAATCCGTGGAAGTGAGTAAAAACGGGGGCGGGATGAGCTGAAGCCCCAGGTCGGGCGCT # Right flank : AGGTCGGCAGCACCATGGGTCCCTGCCTCGGGCAGGACTACCTGCCCGGTGAGGACTCCTCGTCGGTGATCGTGTGGGAGTGCAACGGCAACCCGGACCAGCGCTGGTCGGCCGACGTCGTGTCGTTCAACCTCAACAACGGGCTGCCGGACACCGTTCACCTCGTCAACGACAACAACCAGTGCCTCGGCGTCTGGGGCGGCGACGTCCGCCGGGGTGCGGGCGCCTCCGCCTGGGACTGCAACGGCAACCCCGACCAGCAGTGGAACGTCGAGCCGGTCGGTGGCGGCATGGTCCGCCTCCACTCGACGTACCACCAGGAGCTCTGCCTGGGCCTCAACAACGGCGGGACGTGGAACGGCAACACCGCGATCGTCTGGGACTGCAACAACAACTCCGACCAGAAGTTCGTCGGGACCAACTTCGGGATCTGATGCGGGAGTTGGGTCAGCCCGCCGCTTCTTGTCTTCGGAGCGGCGGGCCTTCTCGTTTCAGCCCGC # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 679948-679249 **** Predicted by CRISPRDetect 2.4 *** >NZ_MECJ01000028.1 Streptomyces sp. CBMA152 CBMA152_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 679947 29 100.0 32 ............................. CTGTTCTCCTGCCCGCCGTGCCCGCCCGTGAT 679886 29 100.0 32 ............................. GCCTCAACGGCCTGTCGGGCCTTGATGTGGGC 679825 29 100.0 32 ............................. CTGTCCCGGGGCCTGAACGAGATCGACGACGA 679764 29 100.0 32 ............................. TTGACCGGGTCGCCGGGCTCGTGGGGGTCGTA 679703 29 100.0 32 ............................. GTGGTGGTGTACGGGGCGGACGCACCGGTTAC 679642 29 93.1 32 .............AC.............. GACCGTGCCTTGTGTGAGGCCGTCCAGAGCCT 679581 29 86.2 32 .............AC......A......G CCCGGTGACGTTGAGGCGTGGCCTGGCTGTGA 679520 27 75.9 32 ........--.....AGCA......C... GACACTGCCGCGCTGCGTGGGGCACGGCCTGT 679461 29 79.3 32 C.A....T.....AC.T............ TCGTAGGGCACGTGGGTCAGTCCCTCGGCCAT 679400 29 96.6 32 .............A............... CCGGACCGGACCCGCGAGCTGATCCACCAGAC 679339 29 93.1 32 ............T........A....... TGGGTCCAGCTGAACGGGCTGCCCGGCCTGCT 679278 29 72.4 0 .C...........AC.......A.AG.GA | A [679253] ========== ====== ====== ====== ============================= ================================ ================== 12 29 91.4 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GTGCTGCACGGCCACGTACCGGGCCGCGATTTCGAACTCCGGCTCGTACTCGGCACGGTACTCCGCATCGAGGTCACGGACACCCGGGGCGAGCGGGTGCCGTGCGTGGCGGATCCGGGGGCGGGTGCGGGTGCGGGTGCGGTGGGTGGGGGTGCGGTCGCGGTCCCGGGCGTGGTGGGCGGGGGCGCGGTTGCGGAGAGGGGGCGGGGGTTGGTGCTGGTTGCGGCGCTGGCGTTGGCGTGGGGCGTGGAGGAGCGGGCGGTGGGGAAGGTGGTTTGGGCGGAGGTGGGGTGAGGTGGGGAGGGGGTGAAGTGGCGGCCTGTTAAAGGCTGTTGAGGTCGAACGTGACGACGTCGCGAGGTGCGGATTGCGGCGACGCAGGCCGGGGGAGGTCGTGGCCCGCTAGCCTGTGGCTCACGTGCGGGATGGGGCGTATGCCGGAAGCCATGAACGTGAGCAAAAACGGGGTAGGGGCGGGCTGAAGCCCCAGGTCGAGCACT # Right flank : AAGCCATGGAGGTGAGCGCTCCCGCACTTGACTACCCAAACTCGTCAACATCCCTGCGAAGAGCAGCACTTGATTTACCTGCGCAATTCGCTACGGCCCGGTCGTTGGACGCTAGCGTGGCGCGCTTGGACCGGCCCGGGTCGCCCCGGGTGAGAGCGATGGAAGGTAGGACGCTCATGCGCGTCTCTGTCATCGGCCTCGGCCACCTGGGTATCCCGCACGCCGCCGGTATGGCCGAGATCGGGCACGACGTGATCGGGGTCGACATCGATCAGGTCAAGGTCGACCGGCTGAACGCGGGTGAGTGGCCGATCTACGAAGCGGGCCTGCCCGAACTGCTCGCCGCGCACACCCGCAGCGGTCGCCTCCGGTTCACCACCAACCTGGCCGAGGCCGCCGACTTCGCCGACGTTCACTTTCTGGCCGTCGGGACCCCGATCGACGCGGACGGTCGCTCGTACGACACCGGTCAGATCTTCGGCGTCGCCCGCGCGTTGGCC # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 245336-244146 **** Predicted by CRISPRDetect 2.4 *** >NZ_MECJ01000029.1 Streptomyces sp. CBMA152 CBMA152_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 245335 29 100.0 33 ............................. GACATGCTTCCTCCTCTGATTCTGAGGTCGAAC 245273 29 100.0 32 ............................. CAGCGCGGCTGACCGTTCGCGATCCGCGGGAT 245212 29 100.0 32 ............................. GCCTCCACCCTGGCCACCACCACCGGCTCCAG 245151 29 100.0 33 ............................. GCCGACACCACTACCTCGTGGCCCAGGCCCTGG 245089 29 100.0 32 ............................. CAGGCGCTGCTCCGCCAGGCCATCGAGTACGG 245028 29 100.0 32 ............................. GAGTTCTTCGTGGCCGCCCCGGGCCTGCTCTT 244967 29 100.0 32 ............................. TCGTCGCTGCTCGCGTGCCAGCCCGAGAAGTC 244906 29 100.0 32 ............................. GGTGACGCGTACAGCACGGACGTGACGGCCGC 244845 29 100.0 32 ............................. CGCCAAGCAGGGCGACGCGCTCCTCGTGCCGA 244784 29 100.0 32 ............................. TACCTCGTGTCCAACTGGACCGCAGGCACCGG 244723 29 96.6 32 .............A............... CACTCGTACGAGTGATCGAACAGGAAAACCGC 244662 29 100.0 32 ............................. AGGAAGGTCTGCCCGACCCTCGCGCGGCTGCC 244601 29 93.1 32 ............T...............T GACCGCCTCATCCCGGGGCTGGCCGAGGTCGC 244540 29 96.6 32 .............A............... TGGTGTGCGCCCGCGTCCTGAACACCCCCGTG 244479 29 93.1 31 ....C..................A..... CCAGCGCCTGCTGCTCGATGCCGGTGCCCCA 244419 29 100.0 32 ............................. GATCCGAGGACGCGCGGCCCGGTGTCGCTGTC 244358 29 96.6 32 .............A............... CCGGTGGAGATGCCATCCTTCTGCCCGGTCGG 244297 29 100.0 33 ............................. TCGTCTCCACCGAACCGGCCGACCACACCGTTG 244235 29 93.1 32 .......T................A.... CTCTGGGTGGAGCCGCCGTCGCCGGACCACAA 244174 29 82.8 0 ...........AT....A...C..A.... | ========== ====== ====== ====== ============================= ================================= ================== 20 29 97.6 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : ACGTACACGTCAGCGGTGGCCGCAACTACGGAGACGAACCGATCTGGTGACCGTCATCGTCCTCACCAACTGCCCGGCGGGCCTTCGGGGTTTCCTCACCCGATGGCTGCTGGAGATCTCGCCGGGCGTCTTCCTCGGCTCGCCGTCGACACGCGTACGCGAAGTGCTGTGGGCCGAAGTACGCCAGTACTCGGCCCAGGGCCGAGCCCTGCTCGCCTACCAGACAGACACGGAACAGGGCTTCACCTTCGAGACCCACGACCACGCCTGGCACCCCACGGACCACGAAGGCCTGACGCTCATCCACCGCCCCACCCCTCCACCCACCGCAAGCCCCCCAAACCCCCCACGCCAGGGCTGGAGCAAGGCCGCGAAGCGGAGGCGGTTCGGGGGTGGGTAGGGGGAGTTGGGCGGCGCGGGGGTGGGTGGTCCTGATGCCGGAGCGTGTTGCAGTGAGTAAAAACGAGGGTGGGGCGAGGTGAAACGGCAGGTCGGCTGCT # Right flank : ATCCGGGAGCAGCGGTGCGCGGCGCGCTGGGCCAGGAGGGAGGCTGGGCCTCCGGCTCCTGGCCGCGCGCGCCGCGCAGGGGTTACGGCGTCCCCTCCCACCCCTGCCCCCGCAGCACTTCCGACACATCCGGTGCCCGGTAGTTCGGGCCCTTCAGGACCTTGCCGTCCGCGCGGAGCAACGGGCGGCCGTCCGGGCCCAGTTTGGTCATGTTGGCGCGGTGGATCTCCGCGATGACCTCGTCGAGGTCGATGCCGTGGACCAGGGCGGTGCCGTACGCCACGTAGACGACGTCCGCGAGTTCGTGGGCCAGGTGGGGCAGGGGGCCGTCGACCGAGACCTCGGCCGCTTCGGCGGCCTCCTCGACCAGGAGGTCGCGGCGGTGGGCGGCCAGGTCGGGCGGGATCTCGGTGGGCGTGGTGCGGGCGTCCAGGTCGAAGGTGGTGTGGAACTCCCTCACCAGCCTTGCCGGGGAGGACCAGTTCTCTGTTTCGGGGTCT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 168699-166961 **** Predicted by CRISPRDetect 2.4 *** >NZ_MECJ01000006.1 Streptomyces sp. CBMA152 CBMA152_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 168698 29 100.0 32 ............................. TCGCACCCCACAACGCCCTGACCTGCGGGTTC 168637 29 100.0 32 ............................. GCGCGGAGTTTGCGCTGCACGCTGGCGTAGTC 168576 29 100.0 32 ............................. TACAGGCTCCCTGTGCACAGCTGACAGTTGAT 168515 29 100.0 32 ............................. CTCACCGTGCGCGGGGAGTTCCGGGGCACCGA 168454 29 100.0 32 ............................. CCGTCGAAATCGGGGATGGGCGTCGGGAGAAA 168393 29 96.6 32 ............................G AGCCGTGGCAGGAGCCCTGTGGCCGTGCGTGC 168332 29 100.0 32 ............................. TTGCCACAGGGTCGCGGTCCGGAAGACCTGCC 168271 29 96.6 32 ............................G TTGTCCACCCGCCACAGCGCGCCCGGCGCGTC 168210 29 100.0 32 ............................. GAGGCGGGTCTGGTCGTGGAGTTCCGGCACCC 168149 29 100.0 32 ............................. GAACCCCCAGCCCCGGCCACCGGCTACGCCCT 168088 29 100.0 32 ............................. GAACTGGTGACCAAGCGCCGTGTGCAGCTCCA 168027 29 100.0 32 ............................. ACCGCAAGCAGCGCCTCCTCTTGCCCGCCTCC 167966 29 100.0 32 ............................. CCGTGCTTGGCTTCCGCAGACGCCCCCGTACT 167905 29 100.0 32 ............................. TGGCACTGCTCGGCGTGCAGGGAGAGCAGTTC 167844 29 100.0 32 ............................. GGCCGCCGCTACGGACGGCCCGGCGCGCAGGT 167783 29 100.0 32 ............................. CGCAATCCGCTCGGACCGGGGCCTGGGGACCA 167722 29 100.0 32 ............................. GGCCGGTGATGCTCTGGACCTGCCCCCGTGCT 167661 29 96.6 32 .....................C....... ACCGACAACATGCTGGCCGCGTACAACGCAGG 167600 29 96.6 32 .....T....................... GACCGCAGCGGACCCGACTCCACAGACGTATC 167539 29 96.6 32 ...........A................. TCCACAGCGTGATCCACCACCGCAGTACCGGC 167478 29 96.6 32 ............................T TGCCCGGTACTCATCGTGATGTTCTGTTCTGT 167417 29 100.0 32 ............................. TCGATGCGGGTCGCATCGTCCGGGATGACCGG 167356 29 100.0 32 ............................. TGGTCGCGGCGGTCCAGCACGTGCTTGATGAC 167295 29 96.6 32 ..............T.............. GCGGTTCCTCTGCCCGCTGGCCGGTGACCGCC 167234 29 96.6 32 .................A........... AGGGCGACTTCGCGAGCGTGGGTCTCGTCATA 167173 29 100.0 32 ............................. GCGAACACCTTGGCGTGGCCGAGGAGCAGAAG 167112 29 100.0 33 ............................. GTCGGGCTATGGCAGCTGGACACGAAGGGCGTG 167050 29 96.6 32 ...............A............. GCAAGGGCCGGAAGCTGGTCCTTCGGCGCCCG 166989 29 93.1 0 ........................T...G | ========== ====== ====== ====== ============================= ================================= ================== 29 29 98.7 32 CTGCTCCCCACGCACGTGGGGATGGTCCC # Left flank : CAGCCGACGCGCGTCCCCCTCGCCATCGGGCAGGACCTCGGCAACCAGCTTCCGCACGCTTGCGGGTATCCACCGGTCCCACAACAGCCCTGCCACCGCGGCGCTGTCCGCCATATGCCGCCACAACGGCAGCCACCCGTCTGTACCGGCATCATGCTTGGCCCAGACGGCACGAGCCGCCCCGGAAAGCCCAGCACCCACAACACCCGGCGATCTTTCCCGCACACCACTCATGCCAGCATCCAAGTACACTCGCGTGCGCCCATGCCGAGATTCCCCGTTTTACACCACCACGACAGGGCCAGCAGCTACAGCCACCACAACAGCAAGACCCTGCCTGCGACAGACAACCACGCTTGCCAGTACATCTATGAAGGTCGCGTCTCAACATGAGCAGATCACCCAATTTGTTTGATTTGAGCGATTGGCCCCATATGTCGACTTGGGAAGAAGTAGTTCACTTCCGGGTTATCGCTCCGTAAAACCGCTGGTCGCGGTGT # Right flank : ACCCACACCCGAGCCCAGCTCAACCAGTTCACGTCCTCCCCCCCCCGGGAGGGTGCTCTGACGACGGCGTAGGGGTTGCCAACGTCGACGTCGTCCTCCCCACCGACGCCCGTCAACACATCGTGGAACGGTCGTACTCAATGGACCATCTGAACTGCTTCTGGTACGACTGCCCGCCGCACGGCGGCCTCGGCATGGGCTCGCGCGGGTTTCTGCGGGCGGCGTCAGCCTGTGCTCGGGTGGGAATCGGATGCCGACAGCACACAGTGGACACATCCCCCTACCTCCGCGTGGCTACTGAAAGTACGGGTGGGTGAGCGGTAGCAACTCCAGGCGTTGGGTATCAGATCGCCCCGAAGAAGGATGCGGCATCGGCGCGCCAGCGCAGTCGGATGACCTTCTCGCTCCAAGCCGCCGTGGCTTCCCGGATAGCGGCAGGTGACGGATTCAGGTTCTTGCTGGACGCCTGTACAGCGGCGAGATCGTGCGGCCGTAGGGCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCACGCACGTGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 178263-179753 **** Predicted by CRISPRDetect 2.4 *** >NZ_MECJ01000006.1 Streptomyces sp. CBMA152 CBMA152_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 178263 29 100.0 32 ............................. GCGCGAGAGCGGAGACCTGGGCGGCGGTGTAG 178324 29 96.6 32 ............................T CCGGGTCGAATGCGGGCATGTTCCTCACCCCC 178385 29 100.0 32 ............................. CCTCGCCTCGCTCCGCAGCAGCCGTTGCCCAC 178446 29 100.0 32 ............................. GACGCCAGCACCTCCGCCTTGTCGCCCCACAC 178507 29 100.0 32 ............................. ACCAAGGCCGTCACGCGCAAGGACATCCTGGT 178568 29 100.0 32 ............................. TTCCGACAGCAGATGGAAGACGCCGAACTGAC 178629 29 100.0 32 ............................. GCGAACACACCCAGGCCAGCAACGGCACGTCC 178690 29 100.0 32 ............................. CGGCTGCAGTGGGCCGACCCCGCCCTGCACGG 178751 29 96.6 32 .....................T....... GCGGGAGCCGTTAGCGGCGGCCGAAAAAACAA 178812 29 100.0 32 ............................. ACCGATCCCGGGCCCCGGGCCAGAACCCCAAC 178873 29 100.0 32 ............................. TCCAGCGCCCGCACATGCAAGTCCTCGGCCAA 178934 29 96.6 32 .....................T....... GTACACCGGAACACCGAGAATCTGGCCGATGT 178995 29 96.6 32 .....................T....... ACGATGACGATGGGCAACTCCACCTTCCGCTT 179056 29 96.6 32 ...........A................. TCGACGATGGCCAAGGCTGCGGGCAAGGGCGT 179117 29 100.0 32 ............................. CTCCGATTCCGACCTTCTACCGACCCAGGTCA 179178 29 96.6 32 ............................G CTTCGTCTCCCCGGTTGAGACCAAGGAAGAGC 179239 29 100.0 32 ............................. GAGGTCATGCGGGACAAGGTCTTGGACTTGAA 179300 29 96.6 31 ............................G ACCTGCGGAAGCAGCGAGTTGAGGCAGCGCC 179360 29 100.0 32 ............................. GCTCGTGCGGATCACGAATTCGAAGCCCTTGC 179421 29 100.0 32 ............................. GGCGACGTCCTCATCTCCAAGGCCACACGAAA 179482 29 96.6 32 .....................T....... GCGACCCAGCACCGGATCATCCGGCTGCGACT 179543 29 100.0 32 ............................. CGGACACCCGCGGATGCGGGGGCCGCGTCCCC 179604 28 93.1 32 ........-............T....... GCGGGAGCCGTTAGCGGCGGCCGAAAAAACAA 179664 29 93.1 32 .........................C..T GACCCGAACTCCTGAACGGGGTTCTCCACGAA 179725 29 89.7 0 .......T...............A.C... | ========== ====== ====== ====== ============================= ================================ ================== 25 29 97.9 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : AGCGATCGTGACGAACAGGTCGCCGCCGGTGTCAACTACGCCTCCCTCGCAGAGGAGTCCTGGTGACCGTCATCGTCCTCACCAACTGCCCAACAGGCCTCAGGGGGCTGCTCACTCGCTGGCTCCTGGAGATCTCAGCCGGCGTCTTCATCGGTAGCCCATCAGCCCGGATCCGCGACGCTCTGTGGGAGGAAGTCCGCACGTATGCCGACCAGGGCAGGGCACTTCTCGCTTACACCACCAACACCGAGCAAGGATTCACCTTCCGCACCCACGACCACAACTGGAACCCCATCGACCACGAAGGCCTCACTCTGATCCAACGCCCCAAAGCCCCTGCCCTGACCTCCTCGACCATCCCGACGAACGGCTGGAGCAACGCATCAAAGCGCCGCCGGTTCGGGAGACGCTAGAAGAATCCAGCTATGTTCTATATATCGCTTTCTATGAAAGTGCTGCATTCTTGGGCTTCGCTGTCACAACGTCGCAGGTCGCGGAGT # Right flank : CCCGCCTCCACCAGCTCCTCAACAGCCTCCCGCTCCCCGCGCCAGCAGCCCAACGAAGGGGCACCGATGGGACTCGCCCGGTTGCTGACGGAACTCTGGAGTCTTGGTGCGCGGCCGCGAGGCCCGCGAGACTATGTTCGAGGATGGGTTTCGATAGATCTGGGGGCGGGATGGCCAGGAAGTGGATCCGTTTCACGGATCGCATCTACTACGAAACTCTCATTGGTGAGGGCGATTGGGAGATGAGGCACGTCGCCTGCCCTGCGTGCACCATGGACCTGGGCCTCACCCTTGAAGGGGAGCCGGGCGAGAACCCCGATGTGGTCTGTCCCTGCGGAGCCAGGTTCGTCTATCCAAACCGTTGGTTGACCTGGTGGGAGGAGAACCTTGCCCGCCCTACGTTCGAACCGCAGCACGAGGTGCGGCGGGACGAACCATGAGCTGACTCACGCAACGGCAGCGCCACATATGGTGCGCCTCAATCGGCACCAACGCGGGAA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //