Array 1 1002415-1000860 **** Predicted by CRISPRDetect 2.4 *** >NZ_NARD01000001.1 Streptococcus anginosus SK52 = DSM 20563 strain ATCC 33397 contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1002414 36 100.0 30 .................................... TATACTGTTTTAATCCTCACACTCAAAGTT 1002348 36 100.0 30 .................................... ACTAGCGTTAGAGCACGCACTACAGCATAT 1002282 36 100.0 30 .................................... CTCAAAATGTGTCTTACCATACAGCGCAAT 1002216 36 100.0 30 .................................... ATTCCCGCGAGGAATATAAGTAATTCTCAA 1002150 36 100.0 30 .................................... ACGGCGAGACCATGAGTGGTAAGTCTTATC 1002084 36 100.0 30 .................................... TGATAAAGAAAGATAGGAGGTGAGTATCAT 1002018 36 100.0 30 .................................... GCTTCTACTAATTGTTCATTCAAAGCGTCA 1001952 36 100.0 30 .................................... TAATCAAAACATCCAGCAACCAAGGCGACA 1001886 36 100.0 30 .................................... TGCTATCTTTCTGCTATAATAAAAGCAGAA 1001820 36 100.0 30 .................................... ATTCTTCTTCAAAGCTCGACGAATGAGCTT 1001754 36 100.0 30 .................................... TTGGCGGGCGCGTTTGTCAATCACTTAGAT 1001688 36 100.0 30 .................................... AAAATAAGGTTTTGAATTTTCTTCTTCTTC 1001622 36 100.0 30 .................................... AATTTTTAGCCCCTCCATTTCCTCGACAAA 1001556 36 100.0 30 .................................... TAAAGGGGAACGTGTTGACGTTCGTGGTAT 1001490 36 100.0 30 .................................... GTCCTAGCTCAAAATCTCTGAAACTCCTAT 1001424 36 100.0 30 .................................... AATTTTTAGCCCCCCCATTTCCTCGACAAT 1001358 36 100.0 30 .................................... CTCCTGTTTTGCGCCCTTGGTTGCTGATAT 1001292 36 100.0 30 .................................... CCCAATATTCGCTTTAAATTGTTCTGTCAT 1001226 36 100.0 30 .................................... GAAACTGGTCGATTATTGGGTAGTCCCTTA 1001160 36 100.0 31 .................................... AAGTCGGCAAGTGATGATGAGTTGCAAAGAA 1001093 36 100.0 30 .................................... TAAAGGAATGTTGAAAGAACCATTTTATAA 1001027 36 100.0 30 .................................... CAATCAGATTATTAAATTCCCCTAATTTGG 1000961 36 100.0 30 .................................... ATTATTTAGGATCAAAGCGAAGGTTGCATT 1000895 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //