Array 1 3251152-3251361 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3251152 29 100.0 32 ............................. GGGCTGCGCGTGCGCGGGCAACGCCTGGTCCT 3251213 29 96.6 32 .........................C... CCGGTTCCATCCAGGTAGTCGGCGCGCACGGT 3251274 29 96.6 30 .....................A....... GCGCGCGCCGGTCACAATCAACTGCTCAGG 3251333 29 93.1 0 ........A................C... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.6 32 CTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TACCTCCTCTACCGCTGGGCCCTGCGCCGCGACTGGCGCGCGGGCGCCATCCTGGGCGCCACGGCGGCCGGCCTGCTGCCCTGGTTCGCCTACCAGGACCGCACGATCTTCTCCTTCTACGCGGTCGTCTTCATCCCGTTCCTGTGCCTCGCGGTCGCCATGATGCTCGGCGCCATCATCGGCCCCCACGCCGCCACCGAACGCCGCCGCACCGTCGGCGCGGTCGGCGCGGGCGCGCTGGTCCTGCTGATCGTGTGGAACTTCATTTACTTCTTCCCGATCTACACCGGGCAGGTGATTCCGCTGGAGGCGTGGCGGGATCGGATGTGGCTGGACACGTGGATCTAGGCGGGCGCCGCTGGTGGGGGCCGCTGGCGCTGGGCGGGCGCGGGGGCGATGGGAGGACTATGCCGGCTTTTCTGGGATTGGCCGATAGGTCGCGATCGGCGAAAGTTGCAGGAAACCGGGCTGTCGCCGGATAAACCCGCAGGTCAATTGCT # Right flank : CATCGACGCCGGCCTCAACTACGACGAAGCGGCAGCGACGACAGCCGGACCCCCGACAGAGTGTCAGTGGGATGGTCTACCGTCCGACGCATGGCCACCGACGCGCTTCCCATCAGGCCGGGTGACGTCCACACGCGCGAGGAGATCCAGCCCGTGCTGGGCGGCAGCCTGTACGGCGGCATCGTCCCGTCAGACGAGAAGGCCAACGTGCTGCTGTTCTCGTACGCGCGGGGCGGGGCCAGGTTCGGCTACCACGACGGCTGGCTGCGGGAGGAGGACGAACTCGGGCCGGTCTTCGAGTACACCGGCGCGGGCAGCGGCGACCAGGTCTTCGGCGGCCGGTACGGCAAGGGCAACTCGGCGATCCTCGGCCACGCCGACAGGGGGCGCACGCTGCACCTGTTCATCGCGGTGGGCACGGTGCCCGGCGGCCGGACCAAACGACACCGCTACGTCGGGGCGTTCACGCTCGACGTAGCCGAACCGTACGTGGTGCGGCG # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3684743-3684531 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3684742 29 100.0 32 ............................. GTGCCCTTGGAGTTGTGGCCCGTACGGCCGGA 3684681 29 100.0 31 ............................. CGCCTTCTCCCCCGTCGTAGTTCCGGAAACC 3684621 29 89.7 32 T....T....................G.. GTCGTGCTCGCGGATGCCGATCGAAGAGGGGG 3684560 29 82.8 0 ........T....AG......C...C... | A [3684533] ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 CTGGTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : ACACCCGGAGGGCGGCGGCGAGAAACGGAAGCCAGTCACGCGGGGTGCGCTTCCCCGTCTCCCAGCGGCTGATCTCCTGACGGCCTACCGGCTCGCCCCGAACTCCAGCGACCCGACAGACCTCCCGCGCCAACCGCGCCTGACTCCACCCGAGCCGCTCCCGCTCCCGCCTGACGTTCGCCCCGACGCCGCTCCCCATGGGTCCAGTCTGGCCGACAGTTGGCTTACATGTGGGCGCTGGCGTGGGGATGTGGGATGGGTGGTGGTCGTTCCAACCACGGCGAGGGGGTGGGGGCGAAGGGTGGGGTGGCTCGGAGGAGTTGGCGGACTCACGTACTTGTTCGTCGGCGTCGTGCGTGGGGGCCGAGAGATAGCCTGGGTGGCCTGGAGGGCGGCAAGGGGGAGTTTTGGGTGATCTGGCGGGCTTGGGTGGTAGGCCGGAGTTCGCGGAAGTTGCAAAAAACCGGGGTGTGGCGAGATAAAGCCGCAGGTCAATTGCT # Right flank : ACCGATGCGCGCTGCATCACTGGAAGTCAACGGCGCGACAGCCCAACTAGGTTGATCGAGCTAGAAGTTTGTCGCTCGTGTTCGAGCTGGGAGTACCGTTTCAGGTGCCTACGTCAGAACGAGGAGTCCAGTATGTCTGAGACCCCGACCATGCTCGGCGAGCGCGTCCGTGACCTACGTAAGCGACGCGGCCTCTCGCAACAAGCTTTAGCTCGTGCGGCCAGGCTGTCTCACTCAACCGTGCGAAAACTGGAGCAGGGTACTGGCGGGGAAACCAGGATGGAGACCGTCCGCGCCCTCGCTCTCGCCCTGCGCGTGCCGACAACCTACCTGCTGCGCCGTGACGCCGAGGTGGCCAGCCTCCCAACGGAAGAGCGCTGGGAGCCGGTGCGCGCAGCGCTCCTAAGGGCCCCGGCAGCGGAGTACATCGAGGGTGACGCACCCACTCCGGTGGGTGTGAAGGCCGCGCTGCAAGCGGCCGAACCGTTGTTCTCCGAGGA # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4045877-4046090 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================== ================== 4045877 31 100.0 30 ............................... TCCGTGCGCCCGCATCGGGCCCGCCATGGC 4045938 31 100.0 30 ............................... GTCGTCCCAGTTCAATGGTTCCGGCGGTTG 4045999 31 93.5 30 .............................CT CGACATCGACCACATGGTGCCCCTGGCCGA 4046060 31 96.8 0 ..........................G.... | ========== ====== ====== ====== =============================== ============================== ================== 4 31 97.6 30 CTCTGGTCCCCGCGTGCGGGGATGGCCCCAC # Left flank : GGTGGGGGCGGGGTTGCTGGTGTGGGCGCGGGTGTGTCGGTGGGTGTGGGTGCGTCGGGTTCGGGCACGCCGGTGGGTGCGGATGCGTCGGTGGTGGCCGGGTTGGGTGAGGCGGCGGCTGCGTTGGGGCTCCTGGCCGACCGGATCGCGGCGGTGGAGGCTGCCATCACACGGGCTGCGGGCCCTCGGCATGTGCCGAGCCGATCGGCGGGGCGGCATGCGGCGCGGGGGGCGGGTGGGGAGGGGGAGGGTTCCGTCGGGGGCGGGGGCGGGGAGCGGGAGGCGGAGTGAACTTCCGTACGCGGCCGGGGTGATGATGGTTGGCTAGCGGGTGCCGGTTCCGTGCGGACCATGGGGTGTGCTGGACGGCCGATAGCCTGAGCGAGGACCGAAGAACGCGAGGTTGGCGCGCGATATGGTGTCAGATGTACGAGATGTCGGGATCGCAGGAAGTTGCAAAAAACGAGGTGGGGTCCCGGTAACGTCGCAGGTCAATTGCT # Right flank : CTTCCAGCTCGACGGCTTTCCCCAGCTCGTCTTCTGTCCCCGGAGGGTGGCTGCTCGCCAGTCCCCGCGCGCCACTGCGACTTCCATCGGGCGCCGCGCCTCACATGGTCCTATCCCGATGCGCTCGCTGTCTGTCATGCCAGCCGTCGATGGCGGTGACGCGAGCCAACGCTGCTTGGTGTTCGTCCTCCGACACGACACCGTGCTCCACTTCGAGGCGTGCGGCCAGCTCGCGCAGTCGGTTCATGTCGTCCTGGTGAGCAGCGGCGGCAGCGATGTAGTCGGTCACCCCGCGCGCGCCGGGGCGTAGTTCGATCGATGCCACCGACTCTTCCGGCACGGTGATGGTGATCTTTCGAGCAGCCATACGTTGAGGATGCCATGTGATGTCGAGCTTGCAATCGGCGTAAGACATACACGTACCGGCGACACAGAGAGAGCTGATGCATCACAGCACGTGGAGGATGCGTCGGGCTCGGAAGCTCGCGGGAGAGGCGGTG # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGGTCCCCGCGTGCGGGGATGGCCCCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.60,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 4 4421254-4421710 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 4421254 29 79.3 153 ..C.....G...G.C.G........C... CTACTCGCGGGATGGGGGCGGCTTGGGTCATGCTGGACCTCCAGTTGAGTGCTGGGTGGGGCGGCCCGAGGCTTTGGCGAGACGCGGGCTGCCCCGTTTGCTGAGTTGGGTGAAGAGCTGGAATGGGCGCTGTAACGTCGCAGGTCGCGAAGG A,A [4421260,4421274] 4421438 29 100.0 32 ............................. CTCCAGAGCCTGGCCAAGCGCCGCGACGCGGT 4421499 29 100.0 32 ............................. TGGGCCTACGCGATCACCCCTCTTGGGGGTGT 4421560 29 93.1 32 ............T..........T..... TCGGAGGACCCGCAGACGGTCTGGACCCGCGC 4421621 29 96.6 32 ....................C........ ATCATCGAGACCGAGGCGCGCGCTGTGCCCCT 4421682 29 69.0 0 T...........GTT......T...GGTT | ========== ====== ====== ====== ============================= ========================================================================================================================================================= ================== 6 29 89.7 56 GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : GCAGGGGGGCCAGGGTGCCGGTGCCGTGGCCACGCCACCGGGCGTAGGCCATCAGGCTCTTGATGTCCACCCCGGGCCGGGCCCCGTTGGACGAGCGCATGGCGCCCTGATAGATCCAGTGCTCACCGCGCGTCGTGGCGACTGTGAGCGTCGGCGGCAGGCTGTCCTGGGCCCAGGTAATGGCGGCCGGGTCATCCAGGTCCACCACGGTCAGCCCGGCCCCACCGGGGTGGTAGGCGACGGCTACAGCGGTGCGCCAGACGGGGGCCCAGTCGCGGGAAGTCAGGGTGGCGGGGTCGATGGTGGCCGCGGCCCAGGCGTGGCATGGCCGGGGGCACCGGCACGGCCCTGCGGCCAGCATGTTCGGCCGCCCCCCGCACGCGTTCCCCTTGCACGCGGCGCAGTTGGCCACGGGTGCCTTGCCGGCGCCGCCGTGGCGAAGGGGCAGCACGGGCAGGCCACGGGCCGCGAGGGCGAGCGCGGCACGCAGGGGGGTGTCA # Right flank : TCTACTGGGTGGCGATGACGGTGGTGCTGGCGCGCGTGTCCGGGCCGGGCGTCCGGCGGCTGTCCGGTGCCTGTCCGCTCGCCCGCGTACGCGCTTTGACCTAAGGAAACGGGCCCGCAAGTGCGGCCGGACGGCCACCGGACGCCCCCGAGCGGCGTTCGGTGGCGTCCGGAACGCGTCCGGGCTGGTCAGAGCCATCCGGTGGTTCGTCCGGTGGCGTCCGGTGTTAGGCGGCGGCCAGTTCCGGTTGGAGGAGGAGGAAGACACCGGGCTCCTCGTCATCGACGAGGTGTTGGCCCTCGTCGGCCAAGGAGTTGAGCTGTTCGGCGACCCAGGTCTTGCCGCGGCCGATGCGGCCCGACTCCCAGTACGGCCTCAGGTCGCGCAGCCGCACCGTGTGGGCGCCGTCGGCGCGGCGTTCGTCCAGCACGGCCAGCAGTTCCGCCAGTGCCTGCTCGGTGGTGCGCTCCGTGCCGGTCGCCGCGAACTTGTCGCCCTTG # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 5117561-5117407 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 5117560 29 100.0 32 ............................. TGTTCCCGGGTCCGCCGATTGCTTCGCACCGT 5117499 27 93.1 37 ........--................... CGACCCGACCCGACCCGACCGACCCGCCCGACTGTTC 5117435 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 97.7 35 CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : CTGAGCAGTCACCGGAACCCGAACCGTCGCAATCCATCACCGGCCAACACCAGCAGGCTCAACGCTGGTGCACCAGACACGCGGCCCGCGACCACCCCGACGGACGCCACCTCCGCTACACCGCCCACGTGACCTTGCGGTGGCTGGTCACCCCCGGTGAGGACATCGGGCCGAGTGCTGATCCGTAGGCGGGGTGAGGAGGCAGTGCGTGCTGTGGTGTGGGGTGCTGGCGCCTGCGGCGGGGAGCGCATTGGCGGGCGGGTCGGGTGGCCGTGGGCGACGTTGGGTGTGCCGCCTTGCGAACGGGGTCAGCCTGGCCGGCGAGTTGGTGGCCCAACATTCTTGTCCGTCAGCCTCGCGCGTGCGAGCGCAGATAGTCTGTGAAGCCTGCTCAGCAAGGGGGCGTTGTGGGCGATCTACCGAGTTTGAGCGATAGGTCGGAGTTCGTGGAAGTTGCAAAAAACCGGGGTCCCGCGCGATTAAGCCGCAGGTCAATTGCT # Right flank : CCGCTGACAGATGTCCTCCGTACGCCAGGTTCCTGGGTCCCCCCGCGCGCGGGCCCCCCACCCCCACCCGAGGCTCAATCGAGCCCCGCTCGTGTCGCCCGCCCCGCGTTGCGTGACTCATAGGGCGGCAGCCACCCACCCGGTACCGTGGTCCGAATGACCACCTCGCGGGATCGAGCGGCACGCAGGACCCGGGGAGCCGGGCAGCGCGACGGCGGCGCCCGTGGGGCGCCGCGCACGCTGGCGGAAGAGTTGCGGGGGCGCCCCGACAGCGCGCTCGAACTGTTGCTGCGCGCCCGGCCTGACCTGCTCAACCCGGTGCCGAACGACCTCACCCAGCTCGCCACCAGGGCGGGCACCCGGGCATCGGTCGTACGGGCCGTCGAGCGGTTGGACCGGTTCGCGCTCCAGGTAGCCGAGGCGCTGGCCGTGGCGCCCGACCCGTGCCCGTACGAGACGCTGCGCGACCTGCTGACCGGCGACCCCGACACGCCCCCGGA # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5540350-5540199 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5540349 29 96.6 32 ............................T CGCCGCGCCGACGCTGCGCACGACCCGCACCG 5540288 29 100.0 32 ............................. GGCTTCCGGGCGCTTTCGCTGACGCGGTGGGC 5540227 29 89.7 0 .....................GCA..... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 CTGGTCCCCGCGCACGCGGGGATGGCCCC # Left flank : CCGCCGCGTGTACGCGCGGCTCCGTACGCTGAGCTCATGGTTGAGAACACCGTGCCCGTACGGGAAGCCCGCGCGCGTCTGGCGGACTACATCAACCGGGCCGAGGAGGGCGTTCCGACCGTCATCACGCGCGACGGCGTATCGGTGGCGGCCCTGGTCCCGATCTCGGACCTCGAAGCGCTGGAGGAACTGGAGGAAGCGGCCGACGTGTTGTTGGTGCATGAGGCGGAGGCGGTCCTGGCCGAGGGCGGGCCGACGGCGACGATGGCCGAACTACTGGCGGACCTGTTCAGCGAGCGCGGTGCGGGCGCGGCGTGAGGTACGCGTTCGGGTTCACTGCGGCAGCGCAGTGGGGGCCTCGGGCGGCACCGTGGGCTGAAGGGCCTATTCGCTCGTATAAACCCTGCGTGAGCGATTTGGCGAGATGGGGCGATAGGTCGCGATCAGTGGAAGTTGCAGAAAACTGGGGTTCCGCGCGCTAAAGCCGCAGGTCAATTGCT # Right flank : CGGGCGCCGACAGCACCCCCGGCAGGATCGCCGGGGGTGCTGCTCGTTCCGCAGGTCACCTTGCGAGTGTTTTACTCACATTCACCGTGGTCAACGACCATGATCACGGGAGGCGCAACTGTGCGCGATCCCGTCCAGAATGTCGTGCTCGCTCACGACCACCTCGCGCGCGCCCGCGCGTTCCATTAGGGCCAGCAGGACGAGCGCGCCCGCGCCGATGACGTCCACGCGGCCCGGGTGCATGACCGGGATGGCGGCGCGTTCGGCGTGGGTGGAGTGGAGGAGGCGGTCGGTGATCTCGCGGACGCGGTCGAGTGGGATGACCGCGTGGTGGATGGCGGCCGAGTCGTACGCGGGCAGGTCGAGTGCGATGGCGGCGATCGTGGTGACCGAGCCGGCCAGGCCGACCAGGGTGTAGCCGCCGTCGGCGGGGCGGAGCGGGACCGTCTGCTCGACCGTGTCGAGGGCGGCCTCCACGTCGGCCCGTATCGCGGCGATCT # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 6037363-6037574 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6037363 30 100.0 31 .............................. ACGCATGGTCGAACGACGGAACCCCCGCGCC 6037424 30 100.0 31 .............................. GGAAGGACCCTCCCGCCGCCAGCGGGTGGAA 6037485 30 90.0 31 .....................G.A.....C TTGTCATGCCGACGGGTGCCCGCGTGGAACA 6037546 29 76.7 0 .....T...-....C..........G.ATG | ========== ====== ====== ====== ============================== =============================== ================== 4 30 91.7 31 CTGGTCCCCGCGCGTGCGGGGATGGACCCA # Left flank : CGCTATCACGAGTACGGCGGTGCCGAGACCCTCGTGGTCGAGCAGGCGCCGACCCCCACCCCGGCCCCGGCGAGATCCGCGTCCGGGTGGCGGTGGCCATCGTCAACCCCGTCGACTGGAAGGTACGTTCCGGCGCGGTGCGCGACCTGCTCCCCGTGGACCTGCCCGCGATCCCCGGGCGCGACGCGGTGGGCGTGGTGGACGAGATCGGCGCGGCCGTACGGGGCGTGAGCATCGGCGACCGCGTCTTCGGCCTCGGCGGCGTCACCGGCGCCACCGCCGAACTGGCCGTCCTCTCCGCCTGGGCCCACGCCCCGGCCACCTCGAGGGCTGGGTGTCGTTGCGTGGCGGCTTCGCGCATGGGGGTGGGGATAGCCTGGGGAGTCTGGTGAGTGAGGGGGAGTGTTATGGGTGTTCTGCGGGACTTGGGTGGTAGGTCGAAGTTCGCGGAAGTTACAAGAAACCGGGGTGGCGCGCGGTAAAGGTGCAGGTCAGTTGCC # Right flank : GCGAGAACCCGAGCCTGGCCTCCCGTATTCGCCCCCGTGCAGGCAGACCAGCGAACTACGAGCCCGAAACGAACGCCTTTGTCTCGGCAAGCGCCGCGTCCCACGGAAACGGACGCTTCTGGCCCGGCTCGTTGAGAACGAACCCGCCGTCCCCGTACAACACGCTGACCCCTACCGCACGCAGCTCCGCGACGGAGCGTGCGAACTGGGGATGCTGGGCGTACGCCGAGTTCACGCACGGCATCGTGATCAGCGGAATGCCCTTGCCGATGCCCTCGGCTACGACACCCACCGGAAATGACGAGGTCAACCCTAACGCCCAGGCGTTGATGCTGTTCATGGTGATCGGGGCGAACAGGATGGCATCGGCTCTGGGCCAGACATCAGCCTCACCCGGGCGCTTGTACCGAGACCGTACGGGGTAGCCGGTCAGCTCTTCCAGCTCCGCCGCCGCGTCCGCCAGCCAGTCCGCAGCGGTCGGCGTCAAGCCCGCGCACACG # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGTGCGGGGATGGACCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 8 6042562-6042724 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060404.1 Streptomyces buecherae strain AC541 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 6042562 29 100.0 43 ............................. CGCGCCCCGGCCGGGAAGCCGGGACGCGGGGCCGGTGCGGTTA 6042634 29 100.0 33 ............................. CCGCTCGATCAGCAGAGCCGTCCGCTCATCCTG 6042696 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= =========================================== ================== 3 29 98.9 38 CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Left flank : GGTCCATGCCAGTCGCGTACCAGGCGAGCGCGAGTTGATCGAGCGCACGGCACGCCGCTTCGCACGCCTCGTCCGGGCGACCTGCCGTCGGAGTCCATCACCGGTCAGCATCAGCAGCTCAACGCTGGTGCACTAGCCACGCGGCCCGCGACCATCATGGCCGCCACCTGCGCTACACCGCCCACATCACCTTGCGGTGGTTGGCCACTCCCGGTGAGGGCATCGGGCCCATCGCGCCGTAGGCGGGCGAAGGCGGGGAACGTGAGGTGTCGTTCAGGCGCACGTCGCAGTGAACCGCCCATTGGTGGCGGGAAGTTGCGTGCCCCAAGAGGCTGGTGTTGGCGTCCGGCTCATGCGCGGAGCGGCCTGCGGATACGCTGCGAACACCGTCTTGCCGGGAGGTTGAGGTGAGCGTTATGCCGGGCTTGGGCGATAGGTCGGAGTTCGTGGAAGTTGCAAAAAACCGGGGTGCCGCGCGATAGACCCGCAGGTCAATTGCT # Right flank : CCAGCCGCCGCCAAGCGCTGTCCAAGCCATCACACCCCCACCGCCCCCGCAGTTACATCGTGGCCCGGTCCGAGGTGGCATGCAGCGAACCAAGCAGACTGAGCGCCTGGGCGCTGGGGCTGGCGGGTTCGGCCTGGTAGACGACGAGTTGTTGGCCGGGGGCGTCGCGTACGTCGAAGGTCTGGTAGGTGAGGGTCAGGGCGCCGACATCGGGGTGGAGGAAGTGCTTGGCGTCCTGGGTCTTGCCGCGCACGGCGTGGGTGGTCCACAGGTGGGTGAAGTCCGTGCTGTGCTCGGTGAGGGTGTGGACGAGTTCCCGCAGCCGCGGGTTGTCCGGGTCGAGGCCGGCCGCCTGGCGCAGGTGGGCCACGGTGGCCTGCGCCGTGCTGTTCCACCGCGAGTAGACCTGTCGTCCCGCCGGGTCGAGGAAGACCATGCGGGCCAGGTTGTCCGCCCGCTCGAAGGGTGAGTGCAGGGCCTCGGCCAGGGTGTTGGTCGCC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGTCCCCGCGCGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //