Array 1 41120-42876 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKWP010000002.1 Lacticaseibacillus rhamnosus strain CBC-LR1 29CBC_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 41120 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 41187 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 41253 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 41319 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 41385 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 41451 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 41517 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 41583 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 41649 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 41715 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 41781 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 41847 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 41915 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 41981 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 42047 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 42113 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 42179 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 42245 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 42311 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 42377 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 42443 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 42509 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 42575 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 42641 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 42707 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 42773 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 42839 36 86.1 0 .......................AA.C....T...G | C,G [42865,42871] ========== ====== ====== ====== ==================================== ================================ ================== 27 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : GACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //