Array 1 1459545-1462272 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059488.1 Acidithiobacillus ferrivorans strain XJFY6S-08 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1459545 28 100.0 32 ............................ ACCAAGAGAATCAAGTAAATAAGCAAGTGAAA 1459605 28 100.0 32 ............................ TTGGGAGTACATCCGACCAAGTCGGCGACCCC 1459665 28 100.0 32 ............................ TTGGTTCTTTATTGGCTTTTGGATTGCTTTTA 1459725 28 100.0 32 ............................ ATAAGCAACCGCATGAACAACAGCACTCACCA 1459785 28 100.0 32 ............................ TGTAGAAAAGGGGTCGCCGTGCCCCTTTTCGC 1459845 28 100.0 32 ............................ TTCCGGGCCTGCTGGTGGTTCGCTTGCTGGTA 1459905 28 100.0 32 ............................ ATATCGTGGAGCGCGTGGGGAGGGTGGTGCGA 1459965 28 100.0 32 ............................ GTCGCGGCCTGATACGTTCCCGCAGCAACTGC 1460025 28 100.0 32 ............................ AGCAAGCAACAAGACCACCAAAGCCAACAAAA 1460085 28 100.0 32 ............................ TTTTGATAACCAAAAAGGCGAACAATGGACCG 1460145 28 100.0 32 ............................ ATGTTCATGGGGCGCTGGCGGTGGATTCGTGC 1460205 28 100.0 32 ............................ ACAATCGCCGCCTGGATAGTGCTGGTAGGCAC 1460265 28 100.0 32 ............................ GTTGCCGACGGTGAGCTGCGGTCATGGACACC 1460325 28 100.0 32 ............................ ATAAAGCCCCCTATAAAAGGACAAAATTAACC 1460385 28 100.0 32 ............................ TTTACCGGCATCGAGCGCGAACCCCGATACTT 1460445 28 100.0 32 ............................ TTCTGGTACTTTTATTGTTCCCGATGGTTCTT 1460505 28 100.0 32 ............................ ATGAACACACGAGAGTTAATTAAGCAGGTACA 1460565 28 100.0 32 ............................ AGTCCCAGCCCGGTGAATCCCCCATCGCGTAT 1460625 28 100.0 32 ............................ AGCCCCTTTTTCTTGTCGAAAGTCACCAACCC 1460685 28 100.0 32 ............................ CTTCACGCGGAGTGCGACCGACTGACCGCGAT 1460745 28 100.0 32 ............................ TACGTGAAGGGCACTGACCCCGTTATGAAAAA 1460805 28 100.0 32 ............................ AAACCATCCAGCAACTGACAATGGGATGCAGG 1460865 28 100.0 32 ............................ AAGATCCGCACGCCGTGGATTTCATGCACCCC 1460925 28 100.0 32 ............................ ATTCACCTTGATCGTCCGGATCTCGGTCATTC 1460985 28 100.0 32 ............................ TAAATGTCTATGAGTCTCCAAAGCAGCAACAT 1461045 28 100.0 32 ............................ TTATGCCCCTAATGTGGTGGTTGTTCCGAACT 1461105 28 100.0 32 ............................ AGCAAGCAACAAGACCACCAAAGACAACAAAA 1461165 28 100.0 32 ............................ AGCGGAAACAAGGGCGCTAAGAGGGTCAGTTA 1461225 28 100.0 32 ............................ ATTCCGCAGAGAATACCGAAGATAACGATTAA 1461285 28 100.0 32 ............................ CTGGTGGTCTTCCAGAGCTTTTGCCCGCTGCA 1461345 28 100.0 32 ............................ AGTGCGTTCATGCCGTCAATGCAGCATGTGAA 1461405 28 100.0 32 ............................ AGGTGTACCACATATAGTGGTAGTTCATTTTC 1461465 28 100.0 32 ............................ CATCGCACGGTATGAATGCCAGATCCGCGCCT 1461525 28 100.0 32 ............................ TGGCAACTTGATCACTTGTTCGCGCTGCATCC 1461585 28 100.0 32 ............................ CGGAGAACTATGGCGCCCGCATCAAGCGACAG 1461645 28 100.0 32 ............................ CTTCAGTTGCACATATATATGGGATTCCCACC 1461705 28 100.0 32 ............................ TTTCTGAAGCGAGGGACATCTTGGCGGAAAGA 1461765 28 100.0 32 ............................ GGTAATCACCGGCCAGGCTCCCCGCCGGTCGC 1461825 28 100.0 32 ............................ AGGCGAATCATGCGTCCTCGCACCGCCAATGT 1461885 28 100.0 32 ............................ GATTACCAGTGCGATGGATGTGGCCGCTGCTA 1461945 28 100.0 32 ............................ CACACCACCGCCTTTTCTTCCGGCGACATGAT 1462005 28 100.0 32 ............................ ATGCGGAAGGCCCATCCACCGGCACAGAGGTG 1462065 28 100.0 32 ............................ CTAAATAAACAACAGCAAAAACAACACCATGC 1462125 28 96.4 32 .......A.................... TTCCCCGGCTCCCCTTTTTAGGAGATATACTA 1462185 28 100.0 32 ............................ TGAATTAGGAGAAGGCGTCACCGTCTGGCGTC 1462245 28 78.6 0 ...................GG...TCCA | ========== ====== ====== ====== ============================ ================================ ================== 46 28 99.5 32 GTTTATCGCCGCGTAGGCGATTGAGAAG # Left flank : GTTCGCAAAGGCGCTATACGCGGCTCTAGCGTCTGTCTATTCTATACCGAAATTCATAAGAGATGCCGGAGCCAAGAAGAAAGACAATCCTGAACAGAGGGTGAATAGCTTTCTGGATCACGGCAACTATCTCGCCTATGGATATGCCGCAGTGGCGTTGCATGGAATGGGTGTACCCTATTTCCTGCCAGTGCTTCACGGTAAGACCAGAAGGGGTGCATTGGTGTTCGACGTAGCAGATCTTTTCAAGGATTGGCTGGTGATGCCGCTGGCGTTTCGATGTGCATCTGAAAAAGCAAAAAATAACCGGTTCAGAGCTGAAGTAATCGAGCATGCCCTGAAGCATGAGGTGTTGGATGATGTGATGGGCTTCATTTCTAGTCTTCCAGATAAAGTAACATGAAATCAGTAAGTTATGATTTATCGCGGAATTCGATGTGTTTACGTCAAAAAGACAACCAATGATATGATTATTATAGACTTTGCACTTTGAAAGTCTA # Right flank : AGTTTGGATTCGATCACTTTGCTGGCCTACAATCGAGCATGGATATCATTGCCCGTTTACATGAAAGGTCAAACGCACACCACACGCGCCCATTTTTGCTCATCCCATCCCACACACCCACATCCACCTTAAACAGCGAAAGAGAAACCTGCCATGACTCCTTCCACCCTAGCTCCTCTCCAGCAGCGGTTGCGCCAGTGGCTCTCTTCTGAACGGATGGCATGGCTCGCTCCGCTTTCCGGCTGGGTTCTGCTGGTAGCGATTTTTGCAGGAATTGAGCAGACTGGACTCTCCTATACCGATCTCCACCAAGGTATACCAGCGGAGACGGCGATTTTTGCGGTTTCGCTTATAGTGCTTACTGCCTTATTTCTGGTGATCTGGCGGATTCTTGTCTTTCGCCAGAACGAAGTGTGCAGCCAAGCCCGATTGACGGATTTCAATGCCCTCCTCGCCCAGGTGCATCAAACCATTGCCCAGGCAGAAAACGAGACTGCCCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATCGCCGCGTAGGCGATTGAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.20,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //