Array 1 4308583-4304461 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045857.1 Shewanella chilikensis strain DC57 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4308582 29 100.0 32 ............................. ACCTGGACACGCTGATCAGCGAAAAGCACGAA 4308521 29 100.0 32 ............................. GCCGCAAAGGTGGTTTGGCACTGAAAACGCGG 4308460 29 100.0 32 ............................. TTAGGCGGGCGAATTGTTGAGTCAAACTTACA 4308399 29 100.0 32 ............................. TAAAAACTGCGTTTGATTTTCGCGATCTTGTG 4308338 29 100.0 32 ............................. CTCGTGGTGTATTCTGTGAACATCTATGCTAA 4308277 29 100.0 32 ............................. GTTCTATCGCATGGACTTCAGTGGATTTGTCA 4308216 29 100.0 32 ............................. GATCCGGCTGATGTTATCTGGAACATCCAGAT 4308155 29 100.0 33 ............................. TTTAGCTTTGAGAACTCTTCTCTGATTTTTGAC 4308093 29 100.0 32 ............................. TAACTAAAGAAGCGATCATACTGGCAGAGGCT 4308032 29 100.0 32 ............................. CTGATTCAGGCAGTACTCCAGTGAGCGAGGTT 4307971 29 100.0 32 ............................. CCCCGGAGTTACCCGAGGCCAGAAACGAAAAA 4307910 29 100.0 32 ............................. TTACCGTTTCTTAATCTGAGCGCCCGGCACAG 4307849 29 100.0 32 ............................. GCTTATCCGAACGGCGAGAAATCACATCAGCA 4307788 29 100.0 32 ............................. GTTTTGCAATGACCCTGACAAGCCGTTGATTG 4307727 29 96.6 32 ............................T CACCACAAATCAAAAACTATACGGGCCTGGAC 4307666 29 100.0 32 ............................. CCCAGCAAATCTGGGAAGATGGCGATGATAGA 4307605 29 100.0 32 ............................. TGTTCAGGTCTGCTCGATTCAGGATGCAAGCC 4307544 29 100.0 32 ............................. CGCATATCACGAAAACGCGCCAGCATTTGGAG 4307483 29 100.0 32 ............................. CGTCTGTTGTCCGAACGAAAGAAGCTGGAACG 4307422 29 100.0 32 ............................. GCACTCAGTATGTTGATTTGCAGGAAGATTGC 4307361 29 100.0 32 ............................. GTATCCGGTGAGGATTACTTCGTAAAGAAGGC 4307300 29 100.0 32 ............................. GAACCACAAAATGGGATACACAATAGCAATCG 4307239 29 100.0 32 ............................. CAAACATGTCTGTCGAAAAAACAATTCGCGGC 4307178 29 100.0 32 ............................. GCGGCTGAGGTACTGACCGAAATCGCCAAAAG 4307117 29 100.0 32 ............................. ATGGCCAGGTTAGGTCTGTCTCTGACTTGATG 4307056 29 100.0 32 ............................. TCGGTACCGAAAGAGGAAACCATTCAGCGCAC 4306995 29 100.0 32 ............................. GTACAAACCCCGATTGGTGACCTGTTCACGCC 4306934 29 100.0 32 ............................. ACTTCGAGGCGTCATGTTGATAGCTGGTGATA 4306873 29 100.0 32 ............................. CTGGTTGGTAGCTCGGCCCTGTTTAATGAGCT 4306812 29 100.0 33 ............................. TTGCCGGTGCCCGCGAGTTCGGCGGCCCTGTGC 4306750 29 100.0 32 ............................. TATCCAACAACTCTACCGCAGCGGGTAGCGAT 4306689 29 100.0 33 ............................. ACAGCCTGCCCAGCCATCATCATAGAGCCTGAG 4306627 29 100.0 32 ............................. TAACCGAGGTAACAGTTTTCGCTGATTCGGCG 4306566 29 100.0 32 ............................. AAAAATGGGGGCCGCAGCCCCCGAGTGAAATC 4306505 29 100.0 32 ............................. TCACAACGCAGTGTGACAACAAACTTAACTTC 4306444 29 100.0 32 ............................. GTAAACAGCGACGCGGTAGGCGCATTGGTAGA 4306383 29 100.0 32 ............................. CCAGATCGGAATCATCGTAGAAGGCATCGATA 4306322 29 100.0 32 ............................. GTTGTCCATACCGCCTACGTCATCCAAGCTGT 4306261 29 100.0 32 ............................. ATACGGCCGCCGCCGATGTTGGTCTTGACGAA 4306200 29 100.0 32 ............................. GAATCGTTATGGAAACCCAACTTAATGAGCGC 4306139 29 100.0 32 ............................. GCAACACCCCGACACCGACGAACACCAACTGG 4306078 29 100.0 32 ............................. GCGGGCAATATCGCGTCAGGCATCGGGGAACG 4306017 29 100.0 32 ............................. CTGGAATGGGAAGATCTTCTTCGCCGCCGGGA 4305956 29 100.0 32 ............................. GCTTCTGAGCGCATAGTTGGCGGACAGCAATC 4305895 29 100.0 32 ............................. CATGATGATTACTGACACTTGTGCTATCTGCC 4305834 29 100.0 33 ............................. CATATGCAACTCTACCAGTTTTGCACATAACAA 4305772 29 100.0 32 ............................. CCTCGCTCGATGTTTCTCGGGTCGAATGTGCA 4305711 29 96.6 32 .....T....................... AATAATTGACACGGAAACAACAGGGCTCAAAG 4305650 29 100.0 32 ............................. GCTTGCGATCACCCCTTTTTTCTCGAAGAATT 4305589 29 100.0 32 ............................. CGAACGAGACGCCAGGCGCACATGTGACAATC 4305528 29 100.0 32 ............................. GCCGTCAGGAATGGGAACGGCGGTTGGCATCC 4305467 29 100.0 32 ............................. TTTTATATATCTCTGAATGTCGCGCGGCTTTA 4305406 29 100.0 32 ............................. CCCATGCGGTCGATGTTCTTTTGCGGGTTACG 4305345 29 100.0 32 ............................. GTTGTTGGCAAAAAACCCTTTACCTTTCCAAT 4305284 29 100.0 33 ............................. TATTCGATCCAGAGCTTCTTGAATCCCTTCGGC 4305222 29 100.0 32 ............................. ATCAAAAATTGAATTATTTAAGCAAAGTGAAG 4305161 29 100.0 33 ............................. CACGTCTTGCTGACGGGCGCAGCACAGATATGC 4305099 29 100.0 32 ............................. TCTTCCACATCAAACTCCACTGTAATTTACAG 4305038 29 100.0 32 ............................. TAGATACGTGCATTACATTGCACGCTTTCAGA 4304977 29 100.0 32 ............................. TCTTCCACATCAAACTCCACTGTAATTTACAG 4304916 29 100.0 32 ............................. CACCAGGCCATTGATGACGGCGCCCAGATAGA 4304855 29 100.0 32 ............................. CAAATGAAGGCAGAGAAGGGGTTTTCGGGAAT 4304794 29 100.0 32 ............................. ATGACATCTTACGCTCAATCACTGGTCGATTA 4304733 29 100.0 32 ............................. CGACTTTCAATCTTCCAGATATGACAGTAAAG 4304672 29 100.0 32 ............................. TAGATACGTGCATTACATTGCACGCTTTCAGA 4304611 29 100.0 32 ............................. ATGCCGGTCAAACTAGCCCAGAGGCGATCAAC 4304550 29 100.0 32 ............................. TCGGATTAGTACCCGAGGTGGGCGACCAAAAG 4304489 29 89.7 0 ............T.............GT. | ========== ====== ====== ====== ============================= ================================= ================== 68 29 99.7 32 GAGTTCCCCGCACCCACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCTTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGAGACACTTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAGTCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGTCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATTGCTTAAAAAACAATAGTATTTGCCAAGA # Right flank : TATTTCTTTACTGTACAACCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATGTCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCGATGTGTTCATTGGCCATGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAACTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGTGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGAGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //