Array 1 11320-10779 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000148.1 Coleofasciculus sp. LEGE 07081 NODE_181_length_17114_cov_8.81527, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11319 37 100.0 35 ..................................... TAGCTCATCCCCTATCGTGGGGTAAGTCTTGACGG 11247 37 100.0 36 ..................................... CTCGATGGACTTAAAGTAACCCTGATCGGTTAGGTG 11174 37 100.0 34 ..................................... ACGCCACGAGAGGGATTCAGGAAAGGGGAAGCAC 11103 37 100.0 34 ..................................... TTCCATTTCTTTGATAAATCTTGCACAAATGTAG 11032 37 100.0 37 ..................................... TAGATCAAATAATAGACGTAATCCGAGATCCATATAT 10958 37 100.0 34 ..................................... CGTCTGCCCCAGCGTCTTGGTAATGCACACCTAT 10887 37 100.0 35 ..................................... TGCTTCTTGTTCCCTCAAAGAAGCAAACGCCTTTT 10815 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 8 37 100.0 35 GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Left flank : GATTATACGGCAATTGGACCCTCGGTGAATATTGCGGCGCGGTTGCAAGAAGCGGCAGAACCTAATTCGATTCTCGTGTCTGCTTCGGTTGCCGATTGGTTAGATGATGATGCGATCTCTAAGTACCGTCCCCTGAAGTTGAAAGGGGTGGATGAGACGGTTCTTACCTTTGCGGTTCAACCTCTGACAGTTAATTCCACCTAAAAGGCAGTGAGCTACTGCCAGATAATTCAATGCTTTTTTGCTTGATGGTGACAACCTGTAGGTGTTTTCTGAGGGTAATTCATTTTTGGGGCTGCATTCCTTATTCCACAAGGGTTTGCCGCTTTTACTCTGGCAGTGAGGGTGTCACGGTGGCTGAAAGCCTTGCTGGGAATAGATTTCAGCTAATTTTTTATTTTCCGCTTGTCAACTTTTGGCTCTGGAATGCTACTATAAGAGGAGGTTGTCACCAACGTACCTTGAAAACTGAATACAGTAAGGGTTCTGGATGTCTGCGG # Right flank : TAAGCCTAAAGAGGCTCTATTTCCAATTGAAACTCCCCTTACAGCACTTTGCGAGTCAGTAAACCTCTTGCAAAAGTCAAAAACTCACCCCCCTCAATCCCCCCTTATAAAGGGGGGAAGTTAGAAACGAGGGGGGAAGCAAGAAAAATCAGACTCTTTCCCCTTACTAAGGGGAGGGATATAGTGCATTTTTTCAAGAGGTCTAGTGTGGTATAGCATTACAAGTTTAGGTTAGGACATCCCTACATCCTGAAACCCAGTCACAGATTACTGTTTCCTGTTTCCTGTTCCCCGTTCCCTAGCGCGTAGCGCTATACAGTTCCCCCCTTGATAAGGGGGGCTAGGGGGGTAAAAATGGAGTCTATTCACTATAAAACCGCTGTAATCCCTATCAGCGTAGGGCTTCCGGCGTTTTTCACTAAATCTGAAGTTAAGGGAGCTTATTTGGAGCTAAGAGCGTCTATCGTGAAATGTAGAAATTAGCTTCAATTACTTTAACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 2552-2370 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000147.1 Coleofasciculus sp. LEGE 07081 NODE_179_length_17306_cov_9.45858, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2551 37 100.0 36 ..................................... TCGGCTTACCTTTTTAGCTGCTTGCAGCTCATCTTG 2478 37 100.0 35 ..................................... AAGCTATGGGGTGAGGTGCAAGTAGAAATAGCCGA 2406 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 100.0 36 GTTAGAATTACACTGAATCCCTATCAGGGATTGAAAC # Left flank : TCGATAGGGTGCTACACCCAGAAATTTGCGCGATCGCTAAACCTAAGCAGAGACTTGTGGCACGAACAAGCCTTTGGTTTCTGGATGCGAAACTTTTTGTTATCATTTCATTCTTTATCCCTGGCACCTGAGTCAACTCAATTATCGATTACCCCCTAGAGTTGGGGAACTATAGGGTTTCCTAGCGTCGTGAAGTACATTGAGTTTTCTTACCCACTCCCCACTCCTCACTCCCTGAAAGTCTATACTTTGGTGACAACCAGTAGGTGTTTTTCCAGATAGGTCAAAATTTTGGGCTGTATCGGTTATTCTACAAGGGTTTCAGGCTATTCTGGCTCACAAGGGGGTGTCACCAGTCCTGTAAGCCTTGCGGGAAAAGGCTTTAAGCTGCTTTTTGCAGAAAAGTCTTGTCAGAGTCAGGGGCTGAAATGCTAAAGTGGTGGAGGTTGTCACAACTGTACCTGGAAAACTAAATATAGTGAGGGTTTCAAGATGCCGCT # Right flank : TGGGACGAACGAGATCCCCGACTTCTTTGAGAAGTCGGGGATCTTGCTTGACTTGAATAGAATAGAGTAGATTCTTACTGCCGAGCCACGCCATCTTGACGCGCTGCTTGCTGCACAGCACCCGAAACGGCTGTCACAACGCGCTCATCAAAGACGGAAGGGATAATATGTTCCCGATCTAAATCTGCAACATTCATCAGAGAAGCGATCGCATAGGCGGCTGCCAAATACATATTCGTCGTAATTGTGGATGCCCGACAGTCTAGCGCCCCCCGAAAGACGCCAGGAAAAGCAAGAACATTATTAATCTGATTCGGATAGTCACTGCGCCCCGTTGCCATAACAGCGACATCATCCATCACTAATTCCGGCTGAATTTCTGGGATAGGATTCGCCATCGCCATGACAATCGAATCTTTTGCCATTGACCTTACCATATCAGGGGTAAGAACTCCAGGAACGCTGACCCCCAGAAACACATCGGCATCGACTAAGGCATC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGAATTACACTGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 1490-1815 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000310.1 Coleofasciculus sp. LEGE 07081 NODE_1154_length_3784_cov_2.38638, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 1490 36 100.0 37 .................................... AGACATAGAGCTTGACAGGTCGTGATTGGTAGACATG 1563 36 100.0 36 .................................... TTTGACGGTAGTGTTACGAACACTATGGTCATTGCC 1635 36 100.0 35 .................................... CGGAGAGGCTCCGTGAACGGAACAACGCTTGTTTG 1706 36 100.0 37 .................................... TGTGCTAGCAATGGGACATGAAATCCCAATGCAGAAA 1779 36 86.1 0 ............CTT........AC........... | G [1791] ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 97.2 36 CTTCCCACTCGCTGGGAAAACTACTTGAATGGAAAC # Left flank : GCATCGACCGAAACTGAGGAGAAACTGGTCACGGTGAATATCAAAATTTCTCGCTCTCAACATCAGTGGTTGAATGAAACCGCTCGTACCGTTCGGGATAATAATGACGAACCTGTGCCACCATCGGAGCGTGTCTTTCCACAACATCTGATTGGTGTGGCTGTTGACTTATTGCAGCGAGAGGATATCGATTGGAGTCAGGTGCGGAATGTGGCAGAGTTACGGGAACAGTTAAACCTATGAGTGTTTTAAGGGCTAATGGTCTAATAGGTTTAGATTTTTTAGGAAAAACAATAGCTTTGCTCCTACTATTCACTCATCGACACCACTCGGAAAATCGCCCAAACCCTATGTTTTTCGTTAAGTGGTATCGATGCCATACAGGGAAAGGATTTGAGGCGGGTGTTTGGTTCAAATTTCAGGTCGATATGGTATGATTTTTTCACTGGTGTCGATTTGGCGGCTGTAACCTTTACTGGGTAAGGGCTGCTAGACGAACT # Right flank : CTCCCGCAGCGGAACTGAATCCGGGCGATCGCCCAGCATGAACTATCCCAGTTGCAGAGGAACCAATTAAATCAGCATTCCAGTGGAAGGGTGGGCAATGTCCGCCCTTAATTTTTCTCAAAAACGACTACCCAACGGCTGAAACTTTCTCCCCGTCTACCTTTCAGCTCATCCCATCAAAATCCCCTCCAAGCCTCGGAAACGCAGTCAGAGGATGGATTCACCCCTCGCGCCGATTTCAAGCCCTGTGGAGACGATTTAAAAGGGACATCCCCCAACCCTTATCTGGCAAGCATTTCAGCACATTTCTCTCCCCCAAAGACGCACTACTTCATCAAAATCAATACCCTCCGGCGTCACCTTCACCCCATTAACTGCAACGAATCCCTCAGACACCTGGGGCGGAAAATCTCGTAGTGAACGGTAAAACTCGATAATCACAGCATCCGGCACCTGGCGCTGACGCTGTTGGTTCCACAATAGGCATAGTTCCAGAGGCG # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCCACTCGCTGGGAAAACTACTTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 36442-35828 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000029.1 Coleofasciculus sp. LEGE 07081 NODE_33_length_43530_cov_8.14179, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 36441 37 100.0 34 ..................................... AAGAATGCCAGGGGTGCGGGTTTGGGGATTGTAC 36370 37 100.0 34 ..................................... AAAACCGAGGCGGTAACAAACTCTAGCAAAGGGC 36299 37 100.0 34 ..................................... TGGTCCGAATTTTAATCCTGACTGCTCTTTTAGG 36228 37 100.0 35 ..................................... GTTCGTGATGCTTGTCCCAGGATTATTTTTAAGTT 36156 37 100.0 38 ..................................... GTCGGTTGTTGGATTTGCGTTTTTCTCGACAACCTTGG 36081 37 100.0 38 ..................................... CTCTTGCGATCGCGGCGATTTCGTCCAGCTCATCAATG 36006 37 100.0 34 ..................................... TGGCGAATCCTTAGAGGAAAAAATAGCTAAATCG 35935 37 100.0 34 ..................................... AGAGAATCATAAAGACACGCGACAACGGAGAGCT 35864 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 100.0 35 GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Left flank : ATATATGTTCCGTTCTTACAGGGAATTTTTAAGACTACAGCTCTGTCAGTAGGTGATTTGGGTGTCAGTTTGGTTTTGAGTACTATTGTTATTTGGGCAATGGAGTTGGATAAGGGGTGGCTGCGGCGCAGACAGAGGGAGAACTCTGGAATTCAAATAACTGAACTTTAGCGAGAGTTAGATTGTGGACACTACCTCAGTCTACTCTGTCGGCAGAATCCCCGTGTCTGAAGACCGGAAAGTGTCAACAAGGTGACAACCAGTAGGTGTTTTTTGGGGGGAATCTCTTTTTGGGGCTGCATTCCTTATTCCATAAGGGTTTGCAGTCTTTGCTGTTTCAAGGAGAGTGTCACGGTTTATGAAACCATTGCTATGACTAGATTTCAGACGATTTTTTATTTCCCTCTTGTCACTCTTTGGCTCTGGAATGCTACTATAAGAGGAGTCCGTCACCAACGCACCTTGAAAACTAAAGACGGTAAGGGTTCTGGATGCCTGCG # Right flank : ACAGGGCAGTTATTCCTCATTGACTGACAAAAGTCTAACGCCCTCACCCCCAACCCCTCTCCCCAAGGGAGAGGGGAGCCGATTGATATTCTTGTTCCCTCTCCCCAAGGGAGAGGGCTAGGGTGAGGGCTTTCTAGGCATCTGCTCGCAAGTTTTGTCAGTCAACCAGGCAGTCATTCACTGGCAGAGTAAGTAACGTTTGAATTCCGCAGGGAGGGTGTGTTCACAATCGGTTAGACACTGTTCAACGACTGACGCCGTTACTTCTTCTTCGTGAAAATCTTTAGCCATAAAAATCCGGATAAGTGCCACGTCACCCTGTAAATTAATAGGCTTTCGCCAATCAGTACCACGCCAGAATCCTGGAAGTAGTCAAATACAGCTCTTTATCATGAAGAGGCTGTAAAACGTCCCATCATCCCATTATTAGATTTTAACAAGACTATTTCAACTTTCGATAATTGCCAAGCTCATAACTCCTGATGGCGATCGCATACTAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 141-394 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000205.1 Coleofasciculus sp. LEGE 07081 NODE_310_length_11543_cov_3.18308, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 141 36 100.0 37 .................................... AGTCGCTGCTTTGGCGTCAAGACGCATAGACTCAATG 214 36 100.0 35 .................................... TCGTAGTTGGCTTGATTCATCAAGTCCTGCCCTTC 285 36 100.0 38 .................................... GTGCATCAAAAACCAGAAAAGTCTCATCTACAGGGATT 359 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ====================================== ================== 4 36 99.3 37 GTCCCCACTCGCTGGGGAAATTAGTTGAATGGAAAC # Left flank : GTGAGAGGGAACTACTGCGTAGCGGTTCAAGTGACATCACTTCTCCCACCACGTCGAAGCATAAAGTGACCACAGCTTTTTGGACAACTTATGCTTCCACTTTGGACAGGATATGGTTCAAGTGACAATTCGGACTCCAAG # Right flank : AATCTCCAGAAGAGGCGACAAGCGATCGCCCAAAAAAGCCAACAACTCAACCAATAGCTGACTCATAACTAAAAGCGATCGCTTTTTCACTCCTGGCAGCGGTTCACCTCGCCATTATCCAAAGCCGCAAGTAAGGTTTTCGTCCAAACGCCATGACAGTAGGAGCTTTGAGGATGAGGCTGGAGATAAACCCCACCCAACCTGCCGTGTACTGCCCCCGTCCACTCAAATTGAGCCGTACAAACGCCACTAATCGTTAAGGTTGTTACAGAAAAATATTGCTCATCACTGGGAAATGTACAACGTGAGAAATAAACTTCCCTAATCAATTGCCAGTTGTAGCACTCCTGATTAGATTGCCTAACACAATAGGAAATGCCATCGACATCACGACGAAAATCAACAGAGTAATTAACCTTATTGGTAACTGCCTGACTCCGGGCATTCAATAACGTTTCATAGATAATCCCCGCCGCTGTCCTAACCCGCTGCCGTCTCAA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCCACTCGCTGGGGAAATTAGTTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 3107-3654 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000205.1 Coleofasciculus sp. LEGE 07081 NODE_310_length_11543_cov_3.18308, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 3107 36 100.0 29 .................................... CCTACCGAGGTTAAGAATGCCTTGACTAA Deletion [3172] 3172 36 100.0 37 .................................... TTCACGGTAGCGGTAATTCTGAAAACCGCCTCCAAGG 3245 36 100.0 45 .................................... TCATGGCTCGCCCAGACGTTCTGTTGCCAGGGTCAACCGCAACCG 3326 36 100.0 43 .................................... AAGGCGTAATATCTCTACCCCTTCTGGTGATATTTTGCTGTAC 3405 36 100.0 38 .................................... CTGTGCGGAAATTGTTCGACAAACCACCTGGGTTGAAG 3479 36 100.0 37 .................................... TTTACACGGACTTTCCTCTAGAACAGAGGATAGTAGG 3552 36 100.0 31 .................................... TTGCTCAAGGAGTCGTCAATCAGCAGGCAAT 3619 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================= ================== 8 36 100.0 37 GTTTCCATTCAAGTAGTTTTCCCAGCGAGTGGGAAG # Left flank : GTGAGGGGGATAGCTAATATTAGCATCGGCACCAAAGGAACGAATTGCACCATCATTGCAACGCCATCCAACTTGACGAGTGCCAACGGTGATGATTAGGGTATCGACGCGGGTGGATTGGGATTGAGGAGTTTTCATTGAGTTTGTCTATATCTGCTTTGCACTCTAACAAAGGAGAAGAGGGAAGTGCTAGGAATTTGCCACTATTGAAGATGACGAATTTTTTGTGATTTATCGTTTGATGAGGGGTTGGAGATGACTGGGGATGATTGTTGATTGATAGCGGCTTTTCCCTTGACGTTTGGGGAAGGAGTCATTCGGGAGTTCCAAATAAAAAAATATTCAATTTTATCCCTGAAAATAATTGTCCCCCGGTGGTGTCGGGGGATTTTTTTTACTACACCTATTGCAAAAGTCGATTTTTAGCGATCGCTTCTTTCGCTGTGTCAATCTAGGCTATTTCTCGCTTGATGGAAGATAATTTATGGCATTGTATGTCC # Right flank : GAGTTCGTTCAGGGAGCCTTACGGAGACTGGGTTTCAGCCCTCGAATCGACACACCTCCGGAAATAGTACCATATCCTCCTAAAAATTGAGCCAAACATAGACCTCAAACCCCCTCTCTGTATGGCATCGACACACCTCAACGAAAAATATAGGGTTTCGGGGATTTGCTGAGGTGTGTCGATTGGTAGATTGAACCGCTTTTTTCATGCCATTTTCAATGGTTAGTGGCTTGACTTATCGCCAAAATTAGTATGAATCTTGAAGCACACAGAGGACGCGGGAATAGGGAAAGTGCTGTTGAATGGGGTGGGGAAGAAAAGCGATCGCTTAATTCGAGTTTGCAGGTTGAACACCCAATAAATGCACAGCACCAGGAATCTTGGCTAAATCTTGGAGGAATTGCGATCGCAAATGCTGGGACTGCGGCGTTTTTCCACCCATAAACAAGCAAACAATTTCCTGACAGTTGGTATCTTCTTCTTTATGGGGAATATTCACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAAGTAGTTTTCCCAGCGAGTGGGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 8835-9460 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000216.1 Coleofasciculus sp. LEGE 07081 NODE_340_length_10807_cov_8.72678, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================================================================================================================================================== ================== 8835 37 100.0 41 ..................................... TTCCATCCCAGATCCCATTACCCCAAGCATAAAGCCATCGG 8913 37 100.0 33 ..................................... ATACGCCCAAAGATTGCGGCAATCCTCACACAC 8983 37 100.0 34 ..................................... CAAGTATGCCGAAATTTTCAAAGTTTTGCACTTA 9054 37 100.0 37 ..................................... AACCTAGCAATTTCTAGGAAAAAGTCTGCCATTCCTA 9128 37 100.0 34 ..................................... CTTGATCGATTTTTATTATCTGGCACGGAACTTC 9199 37 100.0 181 ..................................... TCGCTCATCTAATTTCTTGTGGACTCCCTTGATGTTGTTTAAACCTCACATCTTGCACCATTGTCAGTAAACCTGAAAACCCACCCAGAGTTAAAACTCCGGGCTAATAGCTTAAGTCCACTTAAGTGGACTAAAACTCTTATCCAGTCGTCTAAAGACGACTTTAGCTATGAGACAGTGG 9417 37 94.6 0 T..........T......................... | CC,GG,TGG [9422,9427,9430] ========== ====== ====== ====== ===================================== ===================================================================================================================================================================================== ================== 7 37 99.2 60 GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Left flank : CAATGGACAAATCCTGGCTAGTAGCAGTAGAGATAATACGATTAAGCTGTGGGATCTTAGCACTCTGAAGGAAAAGTCTACGCTCAAAACTCATTCAGATACCGTTTATTCTGTGGGGTTTAGTCCCAATGGACGCACTCTAGCCAGTGGTAGTGGAGATGCCACTATTCGGATTTGGCGACTTAAGTAGACCCAGGATTGACTCGTATTGTGGTGATATACTGCGAGATAACTAGATTTTTTTGCTTGATGGTGACAACCTGTAGGTGTTTTTTGAGAAGAGTCCATTTTTGGGGCTGCATTCCTTATTCGACAAGGGTTTGCAGCCTTTGCCTTTTGATGAAGGGTGTCACCGCTCCTGAAAGCCTTGCTATGACTAGATTTCAGCTAATTTCAAGTTTTCCTCTTGTCAACCGTTGGCTCTGGAATGCTATCATAAGAGGAGACTGTCACCAACGCACCTTGAAAACTAAATACTGTAAGCCTTCTGGATGCCTGCG # Right flank : CTATCACAAAATAGAAATTGTACAATGGATTGTTTTTGAAGAGCCTATTGAAGTATCAAGGACTCAGATTCAGAAGTTTAGCCAAAATTTTCCCATGAATGCAAGACCTATTCAGCGGTTAAATAGGCGCTTTTTGTTAGAGTCTTCGCCAGGATAAGGAATTTATTCAGGCTTTAATTCTTGATTGTTATTAATGTTTGTTGACTGAAATATTGTCTCATTTTTAACAAGCCTTTTACCAGTTCCCTTGCTGAACTTATTTAATGCCTTGCTAATCGCTTATTCGCTGGTTAAATTATAGGCTAGTGGTGTGACCAACAAGGAGATTTTGAAATAATGGCTTACGAGCAAGAGAAACAGGTAGCGATTGCAGCGGCACTGGCAGCCGCCAAACTGTGCGAGCAAGTGCGCCATGAAAGGGTGCCGGAAGCGATGGAAAAAAGTGATAAAAGCCCCGTAACCGTTGCTGACTTTGGCTCCCAGGCAGTTATCTGCCGTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTCCACTTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 18697-18509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000039.1 Coleofasciculus sp. LEGE 07081 NODE_44_length_39968_cov_8.74059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 18696 36 100.0 39 .................................... GTGAAGGGATGTACTACCATAAGAAGGAGTAGTGGAACT 18621 36 100.0 41 .................................... TGTAGAAGACAGCTCTTCACCTGTATTGTATTGACGAGATA 18544 36 97.2 0 .........G.......................... | ========== ====== ====== ====== ==================================== ========================================= ================== 3 36 99.1 40 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : AAGCCACCAACGACTTGTCCTGCTTGGCGGATGCACCGGAAGTTGTCTTGACCGATACTTTCAAAGTAGGGTTGCCAATCGGTGAGCGAATCGCCAAAGCACTGAGACAGCAGTTTCCCAAGTTGTTGAGCGTCTTCTGGACTGGAGACGGTGCCATATTCGAGCTGAGAACTCATATCGATGTCGCACCCTTATAATACAATATGTTGTCTATTATACTACAAGTTGGTTCTGGAACAAGAGTGCTTTGCCTCAAATGCCTATCTAAGGTCTTAATAGTTTGATGTATCTAGGTTTGAGGGCAATTTTCAGATGTTTATCGACACCACTCGCCCAATCGCTGAAACCTTATATTTTCCTTTGAGTGGTGTCGATGCCTTACTGGGATAGGATTTGAGGTATGTGTTTGGAGCAATTTTTGGAAGGATGCATTATAATTTCAGTAGTGGTATCGATTTAGCGGCTGAAACCTTTACTGGGCAAGGGCTGCTAGACGAACT # Right flank : CTGTTTGGTTTAGGTACCCATCCTCTTCCACCCTACCGATTGGGTTAAATCTCAGATCTTGCACCATTTGCAATTAGCCATTTGACCCCTCCCCCAACCCCTCCATGAATAAAATCTCAAGAGTAGGAGAGGGTTAGGAAGAGGTGGGAAGGGGGCTGGGAGGCTCTTGTTTTTCGACGTGTTGAGAATGGTGCAAGTTATGAAAGGAGTTTTAACTCTTGCCGGGTTCGCCGATGCAGGGAATGAGCTTAATGCTTTTCAACTCTAATTCGACACTTCCGCCATTTCAATTACGCGCCCTTCCACATCCTTCACCAAAAAATTCAGCGGCTTTTGCTCCCGAACTTTATACTTAAGGCGTCGCATTTGCACTCGCATCAATACCTGTTCGAGACAGTCATGATCAAAACAGACATGACGGTGGCGATTTTTTTGACCGTAGCTTGCTCCGGAAATGACGTGTAACTGCGTATCCTTTTTGAGCTGATACCACAAACCCT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 34306-33816 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000042.1 Coleofasciculus sp. LEGE 07081 NODE_48_length_37600_cov_8.3934, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 34305 37 100.0 34 ..................................... TTCAAGCTCAAGCCGACTCGACAGCCTCAAGTGG 34234 37 100.0 32 ..................................... GCAAAACCTATTTTTCCCCAGAATGGATATGA 34165 37 100.0 38 ..................................... TCTTCCGCTATCTTTATCAATTTTTCCATTGCTTGTGT 34090 37 100.0 45 ..................................... ACTATTCTTGCGTAGTAGATGCACCAGCGCTGTGCTTTATTCCAG 34008 37 100.0 43 ..................................... CACCTGATGCCCTACAGGACTCCCATAACCGCGATGGTGAGTG 33928 37 100.0 39 ..................................... TTGAGCCTTCTTGGGCAGCTCGGCTCTCTCCTGCAAAAA 33852 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 7 37 100.0 39 GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Left flank : TATTCCAGAAGACAAGCGCCGGACGAAAATCCACAAAATCCTTAAGTCCTATGGGCAGTGGATGCAGTACAGTGTGTTTGAGTGTGATGTAACTGATACGCAGTATGCTAAGTTGCGATCGCGTCTGGGTAAAATTATCAAGCCTGACCAGGATAGCATCCGCTTTTACTCTCTTTGTCGTTGTTGCCAGGGTAAGGTGGAGCGAATCGGCGGTGAGCAATTGCGAGATAATTCGATTTTTTTCGCTTGATGGTGACAACCTGTAGGTGTTTTCTGAGGTTGTTTGGATTTTGGGGCTGCATTCCTTATTGGACAAGGGTTTGCAGCCTTTGCCTTGTAAAGGAGGGTGTCACCGCTTCTGAAAGCCTTGCTATAAATGGATTTCAGCGAATTTTAAAATTTCGTCTTGTCAACCTTTGGCTCTGGAATGCTATTATAAGAGGAGACTGTCACCAACGCACCTTGAAAACTAAATACGGTAAGGGTTCTGGGTGCCTGCT # Right flank : AAGCTCAAAGAACCAGATTGATCAGCGTTGAACCTCATCGACAACATCGCGATCGCATAGTCAGGACTTACGCAAATTTCCCTGTAAACCACTAATAGTAGGGAAACGATATATCATGTCCCTACTAGATGTAGCGTCTGTGCGTAAGTCCTGATAGTGATAGAAACTGATATCTTTAGCCTAAAACCTGAAAATCTTTATCTGTAATGGTTTCAAAGTTTGATCTAGCAATAGTGACACAAATCACTATAAAAGTTGATCGCCATCACTGCCAAAAGAGACTAAAATCACCTTAAAAATAGGAAATTCTCACCAATACGTCCACCTTGAATCACGTTCTTCCTCGACAAAATCCTTCACACTAGATAGAGTCGAGTTCTGCTTTATTCTATGAAAGCCCCAATTCGACTCTTGCCGGGTGCGATCGCTGATCTATTTGCTCAAGTCAGTCACTCTGGTAGAGTGACTCTGGCTGATCAATATGGATTGATGGCAGCCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAATCCTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA // Array 1 1540-2799 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000074.1 Coleofasciculus sp. LEGE 07081 NODE_83_length_28852_cov_9.01828, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1540 37 100.0 34 ..................................... CAACTCCGAGGCTTCTTCGGAAAGATGATCGATG 1611 37 100.0 38 ..................................... CCAGGTAGCTGGCTTGCAATGAGCGGAACGCTTCGTCC 1686 37 100.0 36 ..................................... TAATGGGGCAATTATTTCAAAATTTGAGACAGGAAG 1759 37 100.0 34 ..................................... TAGTTTCAGGAACATCATCTGATAGTTTCCTTTA 1830 37 100.0 34 ..................................... AGAACCCATTGATGAGGAACTTTACCTAAAGATT 1901 37 100.0 34 ..................................... TGCGAACTCAATGGCAATCCTGCTCAAGCCTTTG 1972 37 100.0 34 ..................................... GGGTTTTTCCCGAACTGAGAGGCAAAACAGCCAA 2043 37 100.0 34 ..................................... CAACTATTAAATAGCTGCTCTACCACTGAGCTAC 2114 37 100.0 35 ..................................... CGTGCTTTTCCTTGGGGAAGTACTGCTGCAATTTA 2186 37 100.0 38 ..................................... GTATCAGCCTACTCTGCAATGGCGGCGAATAACCAAAT 2261 37 100.0 35 ..................................... CTATAAAAGTAGCAAAAGTGCTATAAAACTAGTAA 2333 37 100.0 35 ..................................... TTTTGGCTAGAGTCTGCGTCGTAATTTATCATTAG 2405 37 100.0 34 ..................................... AGCTTCGGTCTGATCAGCCAGTAGTTCGGCATGA 2476 37 100.0 37 ..................................... TTAGCAATCTATTTCCGTGATCGCCAAGTTGATGAAG 2550 37 100.0 33 ..................................... ATCCTCATGAGGTAATTTTTGAGGTAGCCCCAG 2620 37 100.0 35 ..................................... CTACTTCTGAATAACAGGTGTGAGGATAGGTATAA 2692 37 100.0 34 ..................................... CTTTTACTTGGACGCCATTCAGGATGTAGCGGAT 2763 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 100.0 35 GTCGCAATCCTCTATAATCCCTATCAGGGATTGAAAC # Left flank : AGAATACGAGCGGATTGAGCGCTCAGAAGTTCTGCCACAATTGGACATCAACCTACTATCTCGGTGTCTGATGATGGCTTCCAAAATTGAGGCATTAAGGGAATTTACACGAGGACTGCGGCGGGGTGAGGGATAAGAGTACTTGAAGAGGTATTTGCGTTAGCTTTTACTCTCTTTGTCCTTATTGCCAGGGTAAAATGGAGAGAATTGGCGGTGAGCAATTGCGAGATAATTCGATTTTTTCCCTTGATGGTGACAACCTGTAGGTGTTTTCTGAAGTTGTTTGGATTTTCGGGCTACATTCCTTATTGGATAAGGGTTTACAGCCTTTACCTTGTAAAGGAGGGTGTCACCGCTTCTGAAAGCCTTACTATGAATGGATTTCAGCCGATTTAAAAATTTCCTCTTGTCAACCTTTGGCTCTGGAATGCTATTATGAGAGGAGACTGTCACCAACGCACCTTGAAAACTAAATACGGTAAGGGTTCTGGATGCCTGCG # Right flank : CTCAGTTGCACTAGTGAACACCCCCTCTCCCAATATTGAGAGAGGGGGTTAGAAGGTAAGGGCAAAACCCTCCCTAATCAGTAGTGCCAAGTTGCAACGACTCTTTATCGGTTTGAGTCCATTCCGTATGGAAGACGCCCTCTTTATCGGTTCGCTCGTAAGTGTGCGCACCAAAATAATCACGCTGTGCTTGCGTCAGGTTTTGCGGCAAGCGTTCCCGTCGATAGCTGTCGAAGTAATCTAAGGAAGCACTGAACGCCGGAACTGGAATCCCCAGTTTATTCGCGACTATCAGCACCTCTCGCCAAGCCTCTTGCCGATCCAAAATACTTTGCTTGAACTCAGACGCTAGCAGCAGGTTGGGTAGCTTGGGATTTTCGTTGAAGGCATTCTTAATTTTATCCAGGAAGCCTGCACGAATAATGCACCCACCTTTCCAAATCCGAGCCGTTTCTGCCAAGTTCAGATTATAGCCAAACTCCTCAGACGCTTTACTCAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCTCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 7556-6653 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000078.1 Coleofasciculus sp. LEGE 07081 NODE_88_length_28420_cov_16.6308, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================ ================== 7555 36 100.0 35 .................................... TTAAGTCTCTTCCCACAATACGAACAAAACCCCTT 7484 36 100.0 48 .................................... TCGACATAAGCCGAGTAATTCCCTGCTGTTGCTTGCCAAGCAAGCAAC 7400 36 100.0 36 .................................... AAGAGGAAGCACCCTCTCATCTATGTCCGTTTTTTC 7328 36 100.0 39 .................................... AAATAATGTAGAACATAATGATGTGTAAAAAATGTGTTC 7253 36 100.0 32 .................................... CGTTTCCATGATTCACCTGTGTCATTCCACCA 7185 36 100.0 33 .................................... AGTGACTGCAGAAGATTTTTGATTTGTAAGTAA 7116 36 100.0 35 .................................... GTTATCACAGCATTCTCATTGTTATTCTTTAGTGC 7045 36 100.0 31 .................................... GTTGAGTGTTCCCCGTTGTGTACTTAGTGAA 6978 36 100.0 32 .................................... ATTTGTACCCGAAACGTCTCCGTTTCGGTTAT 6910 36 100.0 39 .................................... TCATTGAGTTTAACCTCCTAACCTTCCAATTTAGTAACC 6835 36 100.0 33 .................................... ACAAGGACTGGAAGGATTTGCATCGCATTTTCG 6766 36 100.0 41 .................................... AAATTTCATGAGAATGAATCTCCAAAATACTAAGTTTTCAG 6689 36 100.0 0 .................................... | T [6655] ========== ====== ====== ====== ==================================== ================================================ ================== 13 36 100.0 36 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : TGGAGGCAGAAACCCCGATGATAAGCGTCCCAAATTTATCAGTTTTGTGTGGCATCGGATGCTACCACTAGATGGCAATCGCTATCTAGAGATTGTGACGTTGTTTCATGGTGGGAAGTCGGGTAATAAGGTGGAGTGGTTAAAGTCTTGGCGGCGGCAAGACTCAAACGGTAAGGGAGAAAACCAGTTACCCCTGTTTATTCAAAAACTCAATGGTTTGGGATTTGAATTCACCTGGGGGACTAAACCTCCCATCTAGAATCACGCACCGTCAAGGTATGATGGTATCTAGGTTTGAGGGCAATTTTCAGATGTTCATCTACACACCTCGGCAAATCGCCGAAACCCTATGTTTTTCGTTGAGGTGTGTCGATGCCTTACAGGGAAAGGATTTGCGGTATGTGTTTGGAGCAATTTTTGGGAGGATATGTTATTATTTCCAGAGGTGTGTCGATTCGGCGGCTGAAACCCTTAGTGGGTAAGGGCTGCACGGGCGTACT # Right flank : CCCCCTTCCAATAAGCAGATAGCTTAGAAGAAATCCTTCATAATTTTGGTGGGGATATATTATGAGCTTGGATTTCGACTGGTTGCAGCTCTTCTACAAATGGATTTTTAACCGGAAGTACCGCCTTCATTTAACTGGGTTTCGTCCGGAGGTTATCTGCTTCATTCAATCGACTGACTCCGAAAAAAATCATCTGTTAGTGCAGCCCCAAAGCGATCGCTCTATCTGGATGCCCCCCCAAGAAGGAATGGATCTAGAAGAAACTCTCAAAGCCTCTTCAATGCGCTGCTTGAATACAGAATTGGGACTAACAGAGTCGGAAGTTCAGTTCCGACGTAGTATCTGGGTAGGCAAGCGTTTATTTCCCTCCTATCGCAAAGACGAACGTGACTTAAGTTACTCCCTACGCGGGTGGGTAGACAAAAATCGAATGATTGGAAAAGCTTATTTTGCAGCACTAATCATTGTTGATAGTCAGGCAGTGATTCAGCCCAACCCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 24817-23185 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWW010000078.1 Coleofasciculus sp. LEGE 07081 NODE_88_length_28420_cov_16.6308, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 24816 36 100.0 36 .................................... TAAAGAAGTAGACATGATGATTAATTCTCCAGAAAA 24744 36 100.0 37 .................................... TTTCCGCTCCGGCTTGGCGTAATGGGTCTTGACCATA 24671 36 100.0 31 .................................... TATCGATATTGGTGGTTTGCGCGGAGGCGGA 24604 36 100.0 33 .................................... TTCTGAACCATCAGAGAAGCGGAGCTTCACCAA 24535 36 100.0 42 .................................... GTTCATCTTCCTTATGGAAGACTACTATTACATAAATCCGAA 24457 36 100.0 38 .................................... TTTAAGTTAGCCATGGTAATTCGAAATCCTTAATAAAA 24383 36 100.0 38 .................................... CTTCCACAAGCGTCCGTGAGGTGCTTGTGGATTGAACG 24309 36 100.0 40 .................................... TCTATGACCCCCTTGGTAGGTGCGTTAGCGAACTGATACA 24233 36 100.0 37 .................................... GGGTGATGGCAAAGTAGCCATCGACACCCTTTCCACC 24160 36 100.0 35 .................................... GTCTGCACGGCAGCTGATTCCGCGCCGTTGTTGGA 24089 36 100.0 40 .................................... GCTGGAGCAATGCTACCAACAACAACAACCAAACCAGCAA 24013 36 100.0 35 .................................... GCTTGTTTGTGCAGAAGCAATGTTAGCGATAAAAC 23942 36 100.0 39 .................................... ATACCCGACAATACCAGTGCTGGACTCAGTCTCTGCAGA 23867 36 100.0 37 .................................... AATTTAGTTATATCCCCATTCAGTTTGAAACCCTGGG 23794 36 100.0 39 .................................... TTCATAATTCCCATCACCATCTGCATGAGCTGGTGTTGC 23719 36 100.0 41 .................................... GAGTTTAACCTCACTGACCTTCCAGTTTAGTAACCCTACAT 23642 36 100.0 38 .................................... TCGTCTTCACCAATACCATTGTAATAGTACTTCATTTC 23568 36 100.0 38 .................................... AAGCTAGAAACTCCTAGAACCTCCACTCCTCCTGAATA 23494 36 100.0 36 .................................... TGGAAACCCTTTGGCTTCCAAATGTTTGAAAATCAG 23422 36 100.0 31 .................................... TTCTGTTTCTTGCGTCAATGGAAGCACTGCC 23355 36 100.0 34 .................................... CAAATGCTGGGCAGCATTGGCAACAATCAGTCCA 23285 36 97.2 29 ...........................A........ CCAAAGAAAAGGTCTTCTTCATGAGAAAA Deletion [23221] 23220 36 80.6 0 ...........................AGCA.T.TT | ========== ====== ====== ====== ==================================== ========================================== ================== 23 36 99.0 37 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : GTAAAATGTTAGTGGTTGTTGTGTATGATATTCCTAATGATAAAAGGCGAACCAAGTTGTCCAATTTTCTAGAAGGATATGGGCGACGAGTTCAACTTTCTGTGTTTGAATGTTTTTTAAGTTTGGAGGAAATGCGGCAGCTTTATGGAAAGGTGAAAAAGTTAGTTGAACCCGTGGAGGATAATGTGCGGTTTTACTGGATATCCGAGGAAGCGGTTTCGAGATCGTTGGTGATTGGCTCAGAAGCACCCCAACCACCGCCAAAGTATTATGTTATCTAGGTTTGAGGGGTTTTTGAGGGGGATTGTCAGATGTTCATCGACGCATCTCGGCAAATCGCCCAAACCCTATATTTTTCGTTGAGATGCGTCGATTCCTTACAGCGAGAGGGTTTGAGGTATGTGTTTTGTTCAATTTTGGGGAGGAAATGTTAGACTTTTAAGAGATGCGTCGATTCGGCGGCTGAAACCCTTACGGGGTAATGGCTGCACGGGCGTACT # Right flank : GAGGGTGGGTAATTCTCACCCTTTTCCCTTGAACTGGCACAAAGCACTAGCCTAGCCGCGCAAGAGCGAAAATATTTCCTGTTTGCTGCCTGTCACGCTGACAGGAATTTAAAGCATTTTGTAAAAGTTGGTGTGTGGGTTATCCTCTTGTAAAATCTATGAGGTTTTGAGCCGCAGTTTAGTCAGCGGCTAAGTTCCTATTGGAGGGAAGACAGTTAATCGTGGTTGATCGGGTGTCATTAACACAGGAAGCAATTCGCCTTCTCGATATCCTTCGCACAACGTCATTCAACGACTGTTATCCACTCAGTAGAGAATTCAGTGAACTACCCAATCGCCCTGGTATTTACGCAATTAAGCACAGATCCCAAGGCATTCTGTATATTGGTAAATCCGGTAATGTCCGGAGCAGGTTAAGGGGTGGGCATAAAGCGTTAGGTTGGGCATTTATCGACAGACTTGACCCTGATGATGTGCGGATTGCTGTCGCCAGAGTATAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //