Array 1 75972-70695 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVP01000007.1 Pseudomethylobacillus aquaticus strain H-5 contig07, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 75971 29 100.0 32 ............................. TCGGTTTTCTCGCGGGCGCGGGTGCAGGCGAT 75910 29 100.0 32 ............................. GCGGACTGTATGACGTGATGGTCCAGGGGCCG 75849 29 100.0 32 ............................. CTAATATTCGGCGCGATGGCGCTGTCATCCTA 75788 29 100.0 32 ............................. GCTTCATGCCGTTGTTTTTAGGCGCAGCCAGG 75727 29 100.0 32 ............................. CCGCCCTGGAGGCGAACCACCACTGGCACGGC 75666 29 100.0 32 ............................. GTCTTGTTCTCGCGGTGGACGATCTGCCCGCC 75605 29 100.0 32 ............................. CCGGTGGTGCTGGCGCGCCGGGCGCAGTCCTG 75544 29 100.0 32 ............................. TGGTGGCAGGGCTTCACCGGCTGGACGACAGA 75483 29 100.0 32 ............................. ACGCGCACCGCCGCCTACATCGTGGACAAGTA 75422 29 100.0 32 ............................. CTAACGCCCCGCACCTTCGCGCTGCCAATGAC 75361 29 100.0 32 ............................. GCCTTCAGCGATGCCGGTTACCGCGCGATGGC 75300 29 100.0 32 ............................. ATTGATTCTGGCATCACTGGCACGTCGTCGAT 75239 29 100.0 32 ............................. ATTGAGCAGATGGACGCTGATATTGAGGCGGC 75178 29 100.0 32 ............................. CCGCGAGCTTTATCAGGTTGTCACCCGCCATC 75117 29 100.0 32 ............................. TCCGTTACTAGCACAGGGGATTTATACAAAGA 75056 29 100.0 32 ............................. CAGTCCACGTTGCCCGACTTCTTGGAAGCCAT 74995 29 100.0 32 ............................. TGGTCGCCGTAGATGGCTTCCAAGAAGTCGGG 74934 29 100.0 32 ............................. CCTAGAGGAAGTTGAGAAACGTTGCTCGTTTT 74873 29 100.0 32 ............................. CGCGATCTGGCAGAGTCTGATGCTGCTGCTGA 74812 29 100.0 32 ............................. GATTTTCTGGAGGAAGTATGAAATACAAACAA 74751 29 100.0 32 ............................. CCTAAATTGTCCGACTTTCTAGGGAGACTGGT 74690 29 100.0 32 ............................. AAAATACCGCTAGTCCACCACGTCCGCGAGCT 74629 29 100.0 32 ............................. CGATATGAGGCGTCCGCAAGCGCATCGCGCTG 74568 29 100.0 32 ............................. CCCTTGTCATTGTAGAGGCTCAAAACAAGGCT 74507 29 100.0 32 ............................. TGCCACGAGTACGAGCCCGGCACAGATCCAGA 74446 29 100.0 32 ............................. CTGTCGCAGGAAGATCGCGAGCGCATTGAGCG 74385 29 100.0 32 ............................. AGAATCGGCATTGATGACATTGCCCACAGCAA 74324 29 100.0 32 ............................. GCAGGACTAAACCTGCTGATGGCGGCAAACGT 74263 29 100.0 32 ............................. GCACTGGGCGCGGGTTCGAAATGGTCGGGACG 74202 29 100.0 32 ............................. CCTCACGCTGAGCGCGACTTCTTCGCCTGGGT 74141 29 100.0 32 ............................. ATTGAGCTACGCGCAGGCTATGAGCAATCAGC 74080 29 100.0 32 ............................. AGACCGAACAAAAATCAGCTGGCGATCACCCG 74019 29 100.0 32 ............................. CCTGGCGACCGGATGATTATAGACTCTGACGT 73958 29 100.0 32 ............................. GATGGGTTAATGAAACGACAAATAGGGCGATT 73897 29 100.0 32 ............................. TCCATGCACCAGCCTGGTACTGTGCCATTCCA 73836 29 100.0 32 ............................. GCGGTGTGAAATGAATCGCACCGTCATCAATC 73775 29 100.0 32 ............................. AAAACGGATTTCCGCCTGGCGCGCTGGTAGTG 73714 29 100.0 32 ............................. CCAGCGCTAGTGGCGACGCTGCCGATTGCCGA 73653 29 100.0 32 ............................. GATGGTCTAACCAAACCGCAAATAGGGCGATT 73592 29 100.0 32 ............................. TTCCAGTCAGTCATCCAATCCTCACAATCATT 73531 29 100.0 32 ............................. CCGATAATGGCCGCCAGCAATTCTGCCATTTG 73470 29 100.0 32 ............................. GCCGCCGGTCAGCGAAGAGTCGCGGAAGAAAC 73409 29 100.0 32 ............................. CAATCCTATGATTGACACGGGTACTATGCGCA 73348 29 100.0 32 ............................. CGCCCTTGTATTCCGCGTGCTCTTTTACAGTA 73287 29 100.0 32 ............................. ATAATCCGATTCCCGGACTAGGGTCAATTCAC 73226 29 100.0 32 ............................. GCACTGCCAGAGTTCCCGTACCTCATCGGCGC 73165 29 100.0 32 ............................. TGAATATTGAAATCATCCGCTAGGGCAGTGCA 73104 29 100.0 32 ............................. CTTTTTTTCTGCTCGATAGGATTGCCATCTGG 73043 29 100.0 32 ............................. CAGCACCATACGATCAGGTATTCATTGCAGAG 72982 29 100.0 32 ............................. CGCTACACACGGCTGACGATCACTCCGAGCGC 72921 29 100.0 32 ............................. GCTTTAACGATGCTGATCATCGGCCACCCCCT 72860 29 100.0 32 ............................. CCCGCCCAGGTTTTCTGGTGCGGGCTTTTTTA 72799 29 100.0 33 ............................. GGAGTCAAGCCTTTTCCATAAATTCCATGTGTA 72737 29 100.0 32 ............................. TAAAAGGTGGGGCTCTGTCGCCGCCAGCGCCC 72676 29 100.0 32 ............................. CATATGTGCCCGTTGCAGCTTGACGTGATTGA 72615 29 100.0 33 ............................. GCGGGTGCGTGATGCTGATGGCCGTGTTTATGA 72553 29 100.0 32 ............................. GTGCAATAACTTCAGACTTTTTGGCAATTGAA 72492 29 100.0 32 ............................. AAGAAACCGGCCAACCACCAGAACAGATCCGC 72431 29 100.0 32 ............................. CCGTGGAAAAAAGAGATATCGAAATCTGACAG 72370 29 100.0 32 ............................. GACACCATATCACTATCATCATTAGCGAGGTT 72309 29 100.0 32 ............................. GTTGTCGTTACCTTTATCTTGTTAACTGTCAT 72248 29 96.6 32 ............................A GGACCTGGCTATTTTTGCTGTCGAGCAAGTGA 72187 29 100.0 32 ............................. GTCTACACCGACTTAACCGAACTCGAAGTGAC 72126 29 100.0 32 ............................. GTGTTCCACCGCAAAATACGTCCGGTGCCTCA 72065 29 100.0 32 ............................. ATCTAAAAACCAATGCGCGGCAGGTGCTCAAA 72004 29 100.0 32 ............................. CCTGGCAGCCACTCTTGCAGGTACTGGATGGG 71943 29 100.0 32 ............................. ATGACAAGGCGGCGATTGAGAGCCGCATCAAG 71882 29 100.0 32 ............................. CCTAGTATCGACCCGGCCAATGATGGCCTGCT 71821 29 100.0 32 ............................. GGTGAGATTCAACGAGCACTTCCAAAACACAT 71760 29 100.0 32 ............................. ACAACGGGGCTGTGATTGACACCAGCTTCTCT 71699 29 100.0 32 ............................. GCCGCTGCCAACCGACAAATCTTGGATGGGCT 71638 29 100.0 32 ............................. GCGGGGAAACCCGCTTTTTTGTCGAATGGTTG 71577 29 100.0 32 ............................. GTGTCGGCATATCCAGCAGCGGCTGCGTTACA 71516 29 100.0 32 ............................. ACTGGCTGAGCCTCACGGAAGAAACGTTAAAC 71455 29 100.0 32 ............................. GCGATAACGCTAAATTGGGTGGGGCTGTCAGA 71394 29 100.0 32 ............................. TCAGCATCATGAGCCAGGAGTACCACAACGCA 71333 29 100.0 32 ............................. AACGCAACCAGGAACGCAATCAGAACCTTGAT 71272 29 100.0 32 ............................. TGCTTGTATCAAGATCCAGTCCGCCAACGTAC 71211 29 100.0 32 ............................. ACGAAGACCGGCACGCGCGCATCGACATCGAG 71150 29 96.6 32 .......................A..... GCGAGTTCTACGACATGACCCAGCGCGCCAAG 71089 29 100.0 32 ............................. GTCAGGGTATTAGTGATGTAGACGTTGCCATT 71028 29 100.0 32 ............................. GCTAACGCGATTCTGGCCAAGTACAAGGGCGA 70967 29 100.0 32 ............................. CCTACTCGTTTGAAAACGCAATGTTTGGTGGG 70906 29 96.6 32 ......T...................... CAGCCTCATCAAGGGCCATAACAGCGCAAGGA 70845 29 100.0 32 ............................. TACGCCCTGCGCCCGATACTCAACGCGCTGCA 70784 29 96.6 32 ............................C CACCATCCGCCCGATTGACCAGGCACGTGACC 70723 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================= ================== 87 29 99.8 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : CCGAGACATTTTCCGCGAAAGCAGATTGTTGGAGCGAATTATTCCAGGCATTGAAGAAATGCTGGCTGCCGGAGAAGTTGTTCCGCCTGTGCCGCCGGAAGAGTCCGTACCTCCGGCTATTCCTAATCCAGAAAGCTTGGGTGATGCTGGTCATCGTGCTTGAAAATGCTCCACCCAGATTAAGGGGGCGAATGGCCATCTGGCTGCTGGAAATTCGGGCCGGTGTTTATGTAGGGAACTACTCGGCCAAGGTTAGGGAACATATTTGGAACCAAGTTGAAAATGGCTTGGAAGATGGAAACGCCGTTATGGCTTGGAGAAGTAATAACGAAGCCGGTTTTGATTTTGTTACGCTTGGAAAAAACAGACGAATTCCGGTGGAATTGGATGGTGCAAAATTAGTTTCTTTTCTTCCTGTGGAGGGAGATAACGATCTTTAAAAATTCGGTAGAATTTTTAAGTGCTGAATTTTATTAATAATTCAGTGAGATAGAAGAAGT # Right flank : CGTGGTTTATTCTTGGCAATCAGGCTTAACCTAGACGGCAGCCTGCTTTGGAATGTAGTGCCAATGAGTGAACTACGGAATTTGAATGGGAAACGTATGGGTGGGTTGTTGTGGCAGAAGGGGCTGGGACTCTAAATGACGCTCTGGTTTCACAGACTCCAGTACCGAGCATTATGTTCCAGGCAACATGCAAGGTACGCCCCTTCCGTCAACGATTAGAATAGCACAAATGATCCAAATCACCATTGAAGACCACGCGGTTATGCGTGCCCTGGCAGTACTCTAGGATAAGGCAGGCGATTTGTCGCCTGTTATGTCCGAAATCTCTGAGTTGTTGTTGGAATCAGCTGAAGATGCATTTGATCAGCAGCAATCTCCATTTGGCCTGCCGTGGAAGCCTCTCCAGAATCCTTCAGAACGTCGCGGGGGGGGGGGCTCAGTGCTAAAATCTTGCAGGATACTGGGCTGCTGGCTGCGAGCCTCAATGCCAGCCACGGATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //