Array 1 548132-550722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABCUG010000001.1 Mobiluncus curtisii strain 22 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 548132 29 100.0 32 ............................. ACTTTCACTGCTCCAGGCTTTGAACTCGGAGC 548193 29 96.6 32 ............................G ACCATATCCAGCAGGTTGCAAATAGGAGAGCA 548254 29 100.0 32 ............................. ACCATCCCCGCGTCAGGGTTTTTCCCGTCTAA 548315 29 96.6 32 ............................G TATCACCATCTACCGAGGAGGAAGTTTTTTTA 548376 29 100.0 32 ............................. CTCGCCCCCCGAAACGCCATCCACACCACCAA 548437 29 96.6 32 ............................G GAGGGCGAATAAATCATGGCTGACTTTTATAC 548498 29 96.6 32 ............................G CCCTCAGCCGGTAGGTTTCCGGTGCTGAAAAG 548559 29 100.0 32 ............................. CCCCTTGCATTTTGGGGAAACCCCGCCCCCTC 548620 29 100.0 32 ............................. CAGGCAGCTACCTTGAGCCTGATAATGAAGCA 548681 29 96.6 32 ............................G AAACCCCCGAAACGCAAAACCTTACGGAACTG 548742 29 100.0 32 ............................. GTGGCAGTCCCAGCAACAGCAAAAACCCCAAC 548803 29 100.0 32 ............................. ATCGCCCTGGGTCAGCGTCCTAGGATTTACAA 548864 29 96.6 32 ............................G AACCCGCCCCTGGCAGATAGCCGAACCCGACA 548925 29 100.0 32 ............................. CACCCTATCCAGGCAAGAAATCGAACGCGGCC 548986 29 96.6 32 ............................G TCACCGATGAGTATCGAGGTCTTAGAGGTTGC 549047 29 100.0 32 ............................. TACCAGTCCACCGCCAAACAAGCCGCCTTCTG 549108 29 100.0 32 ............................. TGTTCCAGGATGCCCTGGCCGTAAATGGTCAA 549169 29 96.6 32 ............................G TAGACGGATATTTTGGAACCCAATCCATCCGC 549230 29 100.0 32 ............................. CGTATGGACAGTAATCCAGACGGTATTCACGG 549291 29 100.0 32 ............................. CGCCTCATCATTAGCCCTAATCATAGATTTCG 549352 29 96.6 32 ............................G GAAATCGGCACGGTTCGGGACTTCACGCACGA 549413 29 100.0 32 ............................. GTTAAATAGCGCCAGCTGATGCGCTGCAGCTA 549474 29 96.6 32 ............................G GCGTGCTTCCAGCGTGTCAGGGTCGTTAGTGC 549535 29 96.6 32 ............................T ACCGCCTGGGCGTTGCGCAAGCCCATGACACC 549596 29 96.6 32 ............................G CTCCACCGTCCGTGTGGGGCTTTAATCTTTTT 549657 29 100.0 32 ............................. GTTGTGAAGCTGCAGATGCAGATTTCGGTGCG 549718 29 96.6 32 ............................T AAATGTAATATGGCTGCCAGTGGGATTACTGT 549779 29 96.6 32 ............................G CCGATTGATAGACCGGTGTATACCCCGGCGCG 549840 29 96.6 32 ............................G GGGTTTCTTCGTTGTTTCCCATGGGTGTTTCC 549901 29 100.0 32 ............................. TACCAGTCCGCCACAATGCCTCTAATCGACGG 549962 29 100.0 32 ............................. CACTACCAACGGCTTCGACAGAGGCAGTTTAA 550023 29 100.0 32 ............................. CGGCAATAATCTGTCGGGACTGCTGATCTAGA 550084 29 100.0 32 ............................. TCGGCGCAAAAATAGGGATGCGGGATGTACCG 550145 29 100.0 32 ............................. ACAAAAAGCCCCCCTCGCGTCCACACACACCA 550206 29 96.6 32 ............................T GTGCCTAGCTTGGTTTGCAGGGCGCGGATTGA 550267 29 100.0 32 ............................. TTTAAGGGGGCACGAGTATGGAGACTATCGAG 550328 29 100.0 32 ............................. ATCGTTACATCCCATAGCGCGCCCTCAATGCT 550389 29 96.6 32 ............................T GTTGATGCTGATTTGACCCGGTTCGTGCGTGA 550450 29 100.0 32 ............................. CAGCCCTTGCGGGTCAGGAACCCCGGCATGGT 550511 29 100.0 32 ............................. GCCCCCTCCATTAGCCGAGTTAGCAGACGAAA 550572 29 96.6 32 ............................G CCTCCATCAGGAACCCGATAAGATTATTCACC 550633 29 100.0 32 ............................. CCCGCGTCTAGTTTCACATAGCTGTTGGTTGC 550694 29 93.1 0 .......................A.T... | ========== ====== ====== ====== ============================= ================================ ================== 43 29 98.4 32 GTGGTCCCCGCACTCGCGGGGATGAGCCC # Left flank : AGGATAGTGTGCTCCGATGATGGTTTTAAACGTGACTGCAGTTCCAGCAGGGCTTCGCGGAGACCTCACAAAGTGGCTAATCGAAATTGCGCCTGGAGTATTTGTCGGAAACCCTAGTGCGCGTGTACGCGATCTGCTATGGGAACGCACGGTAGCCCTGTGCAAAGATGGACGCGCTCTGCTGATTTTTTCGTCCAACAACGAGCAAGGAATGGAGTTCCGCACCCACCGCCACAGTTGGATACCCACAGACTTCGATGGGGTAACCCTAATGATGAGACCATCGGGGGATGGACAACAGTATTACTCGCGCAGAACCGGATGGTCTATAGCCAGACACCAGGGAAGAAAGCGCAGAGGTGGTTAGATTCCGTTCGGATATACAAAGCTCCTGCGGATACGGATTTGGATTGTATTAAGTACAGTACGGAACCGATTTCAGAAATTAGCAGTTGTATGTACACTGGTTAAATACGTAGTGAATTAGCTGTTCACTAAGT # Right flank : CAATGTTGCCAAACGGACTTCTGTTTGGTGCTGCAGCCGAAGACCTTGCCAGCTTGCGCCAACGAGTTGTGGCAAAACTCCAAACCCTGTTTAACCGCTTTTACGTGCTGTAAAGTTCGTTGCAATTTACGCGGGCACGGTATTAGCCACAGTTTCTATCGTGTGCAGACCAGGCTCCGAAGTATCCAGAGATGATTAAATTTTCCGGCAGAACCGTCATCCTTACAGCTCGCATACGCGGGAGAAAAATCAGCACACTTTACCTACCGAAACCAACAATGGGTGGTGCTAGCTGCAATTGGACGGAATCATTGTGCCCAGAAGCGGGGTTGCTCTGCGTGTATCACCATTTCGTGCTGCCGGTCGTGCGGATTAGCCATTTTACAATCGCCGCTACTGCAGCACCCTGTGCCCAGCGGTCGAAGCTACCTGAGCGCCGATGAACTCTGATCCGGGGATCATTAGGGCGACCGTACGATTTCAAATGTTTGTCAAAGTTA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.87, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACTCGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //