Array 1 31993-34132 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011971.1 Steroidobacter denitrificans strain DSM 18526 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 31993 31 100.0 35 ............................... GCACCGACCTCATCGATCTTGGCTTGCAGGTCGGC 32059 31 100.0 35 ............................... CAGCACTTGTGTCTGCTTCTCGTGGCCGCACGACA 32125 31 100.0 35 ............................... CAGGAATTCTTCGAGCGTCTGCCCGCCGTGAATGC 32191 31 100.0 38 ............................... ATACCGCCACCGTTGTGATGAGGATTTCGTTTCGCCAC 32260 31 100.0 35 ............................... GATGTGTCGATCACATGCAGCGCATAGACCTGCGC 32326 31 100.0 34 ............................... CATGTTTAATGCTGAGGACGCCTCCAAGGCTGCT 32391 31 100.0 34 ............................... AAGCCGGGACGCTAGATAAAGCTTATCTGGACGC 32456 31 100.0 34 ............................... TGGTCTACCTGGATGCTAACAGGCTCTGGGTCGT 32521 31 100.0 34 ............................... TCGAAAAGCTGCTCGGGGTGCGTCAGCTCCTCTT 32586 31 100.0 36 ............................... CAGAATCACTCCAATCAAAGGCGGCGCGCATTGCCG 32653 31 100.0 35 ............................... ATGCACGATCTTGGCGCGAACAACTCATTCGCCTC 32719 31 100.0 35 ............................... ATGCACGATCTTGGCGCGAACAACTCATTCGCCTC 32785 31 100.0 36 ............................... AACCGCCACCTGGTCGGTGGCCGCGCCCCTCGCCAA 32852 31 100.0 36 ............................... TCGCGATCACGCAGGATGATCGTGCACGTGCGCGTG 32919 31 100.0 36 ............................... CAGATCGTCGTAGATCGCGAGGCCCTTCGCGCCGCC 32986 31 100.0 35 ............................... ACGAGCACGAGACACAGGAGGTGGTACATGGGTGA 33052 31 100.0 34 ............................... TGATTGACGCAGACGCGGCACGGTGCTTTCGCAG 33117 31 100.0 34 ............................... AAGCGCCATGTCCTGAGTCGGCCCGATATAGAAC 33182 31 100.0 36 ............................... TGAGGCTCGCCAGGAGCGCGCAGGTTGTGGGCGACC 33249 31 100.0 34 ............................... TGGCGCAGCCGGTGGAGCGGGATCAATCGCTCTG 33314 31 100.0 35 ............................... CATTTTATCCACGTCAACGGCGGGATTGATCGCCG 33380 31 100.0 35 ............................... TTGATCCTTGCCGCGTCACGCCGATGGTGAGTGAA 33446 31 100.0 34 ............................... AGTGCAATCGCACGGCATGCTCCAAAAAGACATG 33511 31 100.0 34 ............................... TTACAACAAATGCACGGTGCGCATAGATACGCCT 33576 31 100.0 34 ............................... GAGAGATCCGGGCTTTGTCTGGAAAATACCGAGA 33641 31 100.0 33 ............................... CGAGTTGAAACGCCATGCAGACCAGTGCGCCTT 33705 31 100.0 33 ............................... AGTGCCGGCCTCAAGCGCGCTGAGAGGGTTGTC 33769 31 100.0 36 ............................... CATACTTCCTCGTCATACATATCGCGATCGGTGCCA 33836 31 100.0 34 ............................... TCGTCTATCGACGAGGCGTGGGCTGCGTGGCGGC 33901 31 100.0 35 ............................... TGAGCTATGTCGCGCGCCTCAAACAGACCATCGGT 33967 31 100.0 36 ............................... AGGTCGATGTTTACGCGGCGAAGCAAGAGACCGCGA 34034 31 100.0 37 ............................... AGCATCCTGATGGACATGGAGGTCGATCCATCCAAAG 34102 31 96.8 0 ..........................A.... | ========== ====== ====== ====== =============================== ====================================== ================== 33 31 99.9 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : CCGTTTCTGTGGAAATGAGGCTGAGTTTGAATCGATGATGGTCCTGGTCAGTTATGATGTTAGCACGACGTCTGTCGACGGAGAGAAGCGCCTACGTCGCGTGGCCAAGGCCTGCCGTGACTTGGGACAGCGGGTGCAATACTCGGTATTCGAGATAGAAGTCGAACCCGCCCAGTGGGTCCAACTGCGGCAACGGTTGTGCGATCTAATCGATCCGGAGTTGGACAGTCTTCGCTTCTATCATCTGGGTGCGAATTGGGCGAGGCGCGTCGAACATGTTGGCGCCAAACCGACACTGGATCTGAAGGCCCCCTTGATCTTCTGACGCGAACCGTAAGCGTCCGGTGAAATCCCCGTACTTCCGCGCGAGCGTAACCCGCTGATATTTAAGAGGAGTAGACCACGGCTGGCCGAGAGGGTGTCTATGTGGCGCTGTGGAGACCAAGGTTCGCGCGTTCGGTGGTCTGTTCTCTTTTTCTACAAACACTTAATCTCGGGGG # Right flank : CCTGATAGGCCATCAGCGGCGCTGTCGATGGTGCTATCGTCGGTTGGTGTGGGGGACGACGAAGAAACTGTCGAGGACGCGATCAACCGGCTGATGGAAGCAAAGAAGCTGCTGCCGGATGCCAGTTACTTCGCCTTCACGGCCACGCCTAAGAACAAGGCGCTGGAGATCCTCTCCGAAGAAACGGACCCCAACAATCTGCACGACCTGAAGTCGGCACTGGACGGCTATCAGGTCTACGATACAGTGCAGACTCAAGAGCTGGTGGCGCTGTATCTCGGTGGTGCGGACCGCGATCGCCTCGACCCGATTCTCGATGCCTGCGTGGCACGTGAACAACTCGACGAGGACGGCCAGGTCGATTTCAAGGGCAAAGCTAAAGCTTTCCTGCGTACCTATGGCTTTCTATCCTCGACTCTGCCCTACACCGACGCAGAGTGGGAGAAGTTGTCGATTTTCTTCACTTTCCTCGTTCCCAAGCTGCCGGCGCCAGTGGAGGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //