Array 1 16344-15939 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSA010000038.1 Oscillatoria sp. FACHB-1407 contig38, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 16343 37 100.0 36 ..................................... AGCCTGACGCTGACGTGATCATTGCTTGCTATAGAG 16270 37 100.0 36 ..................................... CTGCAACCTATACCGCTGCTCAGATTGCAGGCGGAA 16197 37 100.0 37 ..................................... GCAAGACTTAATGCTGCCATCTGCATCTCTATCTTGG 16123 37 100.0 36 ..................................... TGAAGTTTGCAACTTGGTCGATTGCAGCAAGTCGCA 16050 37 100.0 38 ..................................... ATCGTGCGGCGGGCGATCGCGGTTGGGATAGGACGCTC 15975 37 94.6 0 .......................A........A.... | ========== ====== ====== ====== ===================================== ====================================== ================== 6 37 99.1 37 GTTGCTGATGCCCTCCCGTCAATGGGTGGGTTGAAAG # Left flank : GGATGTTGAAGACGCAATCACCGAACTGCCACTCCGTTCGGTCTAACGACAAAGTCCACGGCTCTGGAATCGCCATGAGGGCGACAACCGTTTGAGCAATCTCGGTGTAATTGAGTTCGTAGGAGCGGAAGAATCGCTGCAAGCGTTTGTAGTGAGAATCGGTCTGAGCCTTGCCACTAAAGCCCGTCGCTACCTCAGCGAAATTGACGGTTTTGACTCGCAAGAGGGCAATGAGGAACGCAGCGACAAAGCTTAATCTTGCCCCATGCCAAGCAAGATGGGGACGCAGTGCATCTCGAAGTAGAGTAACCTGATTCATGAGGGTTTTATGGATGAATGTAGTAATTCTCATGAAACCCTCTCCTACTCCCTCTTTGCAAGCTTTTGTCCTGTACTTAGGTTTTTCTAATACTCAAAAAGCCAAATTTTCTTCAAAAGCTAGCAACCTTTGCGAAAAGGGGGCTAGCAGGTCGATGTAGTCAAGCTTTGTCGGGTCAAGG # Right flank : GTAGGTTGAAAGAGGCAGGGGTCTGCAAATTACTTTACTTATGTAGACTTCCCTAAAAATGCAGTTAATTCAATGATTATGTTTCGGAGAGTCTCATAGCCTGAGACTGTTTTTTATAAAGGTTTTTGCCCCAGCGCAGCTATCTTGCAGCTTGATATGAGGGTACAAATATCTCTTTTGTGAAACTTCTCTAACAAAAAAGCTTTGTACCTCATTTTTGGATATAGCGCAGTTAATCTGACATCTAACTATATAGCTGAAGCAGTAAGTACCTCCTAATAGTTCTGTTAAGTTGCTCGCCTGATCCGCAGTTCTTGTGGAGTTTTAATAGGTGAACACGCCACGAATTTGAAAACAAGAAAAATCCGCGCCATGAATTTGAAAGCGCAATCTCTGAAGAAAATTCGCGCCATGAATTTGAGTAATTTTCAGTACCTTTCAAAGGCTGAAAGCCGCAATTTATGAGGGTTTTAGGAAGGCTTTAGCAAGCAATTGAAAAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTGATGCCCTCCCGTCAATGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.50,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 17517-21319 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJSA010000008.1 Oscillatoria sp. FACHB-1407 contig8, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 17517 37 100.0 37 ..................................... TCTTCCATTGCTGCCCAAAACTCAGGGTTTTCATTGC 17591 37 100.0 37 ..................................... AATCCCTACTCTCACATCCAATGATGCAGGGTTGAGC 17665 37 100.0 36 ..................................... TTGTTCAACCAGGCGATCGCGCAGAGCACGGGCTTG 17738 37 100.0 36 ..................................... AGGGTCAAGTTCGGTTAGCAGTCGATAGGGCACAAT 17811 37 100.0 35 ..................................... TAGTAAGACCTGTCGGTACTGGCAAGAAACACTCT 17883 37 100.0 40 ..................................... AGAGCCACTGGACGAGGTAGGCGCGTACATGGAAAGGTAG 17960 37 100.0 35 ..................................... TTTAGAGGCACGTCAGGTACACCCAAGGACTCAAT 18032 37 100.0 36 ..................................... TTTGCAATCCTGGTAGCGCAATTGGACGCACTACTT 18105 37 100.0 35 ..................................... TAGTAGCTGTGAGAAGTTGTAGCCCATTGACTGGA 18177 37 100.0 36 ..................................... CCTTGCTCATAAAGCTGAACCAGATCCTGCCAGCAG 18250 37 100.0 36 ..................................... TTGATAGAAGAGTTGCTCAAGCTAATGTGCAACCGT 18323 37 100.0 35 ..................................... TCTTCAACAGGTGTGTCAGCGACAAATAACATCCC 18395 37 100.0 35 ..................................... TTGAGCGATTCTCAGTTCGTTGCGTGCTGAATCAA 18467 37 100.0 35 ..................................... CTCCTCATGGGCTTCGACGACCTGCGTGGGAGCAA 18539 37 100.0 34 ..................................... TTGCCCCTTGCCTAGTTGTTGCTCTACTTCTTCC 18610 37 100.0 34 ..................................... AGGTGAGTTGCTGCCAGGTTCCCAAGTTGCAAAG 18681 37 100.0 35 ..................................... AGTCGGATGTGGCACGTCAAACCAGGAGCCAGGTC 18753 37 100.0 36 ..................................... AATCATGATAAGACCTCGATGGCATTAAAAACAACC 18826 37 100.0 35 ..................................... ATCTGATAGGCACAACCTGCCTCCCCATTGCCCGG 18898 37 100.0 36 ..................................... AGAGGTTTGTTTTCCTGTGTAGTCGTCGGGATCTGC 18971 37 100.0 36 ..................................... TTCTTTGCGCTTGTCATGGCGTTAGACTCCCACCAA 19044 37 100.0 34 ..................................... ATGATCGCCGCTTCACTCGTTGCCCCAGTATCAG 19115 37 100.0 35 ..................................... TGGATAGTAGACAAACAGCAACGGGTGCAAGACGT 19187 37 100.0 33 ..................................... AGTCCCAAACATCTCTTGCCATAGTCTCAGCAA 19257 37 100.0 34 ..................................... CTTGTGCGTCCTGGTATCCCAGCACATTAGTCAG 19328 37 100.0 36 ..................................... AAATTGTGTTTGCGAGGATTGTCGGGGAAGTTGGCA 19401 37 100.0 36 ..................................... TGTGATGATGACCTACGAGCCAAAATTGAACCGGGT 19474 37 100.0 35 ..................................... ACTTCAATCATGCTGCACACTCCTCCTCATACTTG 19546 37 100.0 33 ..................................... CTTTAATTAACTCAAATCGATGTGGCTCCTGAA 19616 37 100.0 34 ..................................... CATCGTGACTTCGATTTCAGGCAGTTCGATCGAT 19687 37 100.0 32 ..................................... AAGAAGTGCTTGCGCGACCTCTTCGCCTTCGG 19756 37 100.0 34 ..................................... TAGAATCCCTGATGGCATGGCAAAACTCCCCCAG 19827 37 100.0 35 ..................................... ACAACTTAAAAACCGCACTGCCGCAGGGGTTTGAG 19899 37 100.0 34 ..................................... CCTGATTTCAGTAAAACCCTCGCAGTACCACTGT 19970 37 100.0 39 ..................................... AATGTCACGAGTAAACCTGCCTTTTTGCAACTCAAGGAT 20046 37 100.0 35 ..................................... CATCGGATGTGCCAGAAGGTGAAAGAGTTGTCTTA 20118 37 100.0 35 ..................................... AGGTCAAGAAATGGAATTACAGTGTGTTTCAACTG 20190 37 100.0 35 ..................................... CTATTAAACGCGATCGCCCCCAAATGGTAAAGCTG 20262 37 100.0 41 ..................................... TACATGTCCTGTTTCGTAGTTCAGTTGTGGGCGGCAATCGT 20340 37 100.0 34 ..................................... AGGGGTGATGGGGGCATCAAACACCCAATAGCTG 20411 37 100.0 36 ..................................... CAGTTCTTCGCGGTCAAGAATTGGCTCCCCATCTGT 20484 37 100.0 39 ..................................... TCTGCATCAACTTCAAATTCCTCATAGCCAACATTCCGC 20560 37 100.0 34 ..................................... TTTGTTGATGTGTTGCGAGTACTTCAGCAGTTGC 20631 37 100.0 35 ..................................... CTTTACCAAAAGCCCAAGTATTCTGTAGCACTCCT 20703 37 100.0 34 ..................................... TCGCTTTTCAGAATGGCGAGATTAGAGCACTGAT 20774 37 100.0 35 ..................................... CTATTGTCGCGATCGCTCCAGAATGTACTATTACG 20846 37 100.0 37 ..................................... AGGGCATGGCGAAAGACCATCTTCGGCAACTCGTCGA 20920 37 100.0 37 ..................................... TGACCCTTATCACCCTTCAATCCAGGTCTACCTTCAG 20994 37 100.0 35 ..................................... TTATCACCCTCAAATTGCACCGGGGTATCGGGCTT 21066 37 100.0 33 ..................................... AACACCACTTCAACATATTGGGTCAAAACCAAG 21136 37 100.0 37 ..................................... TCAACCCTTCCTTGCTCGCTCCAATTCCCGGACTGAT 21210 37 100.0 36 ..................................... ATTTCCGTGCGATCACGCCATCCATGGAGCACCCGC 21283 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 53 37 100.0 35 GTAGCGTTCAGCCTTCGGGCTGGACGAGGATTGGAAC # Left flank : ATCAACCATTCGTTCAACGTTAGACTCTAATCCTTGTGAACATCCTTGTCGCCTACGATGTCAATACTGAAACTCCAGCAGGTAAACGTCGCTTGAGAAAAGTGGCTACCGTTTGCAAAAATTATGGTCAACGGGTTCAATTTTCAGTGTTTGAGTGCCAGCTTGATGAAGCTCAATACGAGGCATTTCAGGCACAGTTAGTTAAAATCATCGACCCAAAGCTTGATAACCTCCGCTTCTACAGACTGCCGAATCCAAGAGAGCAGCATATTAAGTGCTATGGCATAGATAAGTATGTCGATTACAATGACACCCTCATTGTTTAAGTTCAGCGCGAACCTAGAGCAACGTTTAAAAAGCTGTGAGGTTCGCGCACTCGTTCTATCAAGGGTTTTAGAGATTTTGATGGGGATACAACAGATAACAGCAGTGCGATCGCTCAAAGGTTCGCGTTACTGGCACCCGAATCCCTTACTGGATAAGGGTTTGCTATAATCGCC # Right flank : CACTGGTGGGGGCGATCGCCTCCAAACACCTTTGAGCCAACTGAGGTTGTTACCAGTGAGCAAACAGAATGTTTGAGCATTTCAACACTGCACTGGTAGTGGAAGAAGAACTGAGATCCAAACTGATAGTTCACAACCAAAGTGGGCACTTTAAAATTAATCCCCCTCCTAGTCATAGATGCACCCTGAAGGTTTACGTAGAGGGGGTTTTTTCATGCCTACACTCAGGCAGTCCTTAGCTTCGCCAACAGTTTCTTAAACAACAGATTTGCCGCACGCCGATCGCCCGGTCTAACACTCACCACCACAGCCGCGATCGCATCCTTAATCTCTTGCTCAGTCAATCGGGTTAAGGATTCTGAATCAGAATCTAGAGCCTTTGCAAAATCAACAATCTGAGTCTCAAACCGTGCAGGCAACCGCATCATCTTAGTAGGCGATCGCCACGCACTCTTACGCCCCGCCCCCGGTCGCTTACCCCCGATCGCCATGATTCTGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGTTCAGCCTTCGGGCTGGACGAGGATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.60,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //