Array 1 321906-321535 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026983.1 Christensenella sp. Marseille-P3954 chromosome contig00001 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 321905 33 100.0 34 ................................. ACCGCATCGTCAGAGAGCAGTTGATCGAGCGGGC 321838 33 97.0 34 ......T.......................... TGGTGGACGGTGTACCCATGGCAGCCAAGGACTA 321771 33 100.0 35 ................................. GTTGCATGGATATCCGGCAACAAAGCGGAGATGTC 321703 33 100.0 34 ................................. GCTGTGAGGATTCCGGTAGTAATTGCGCTTGCGT 321636 33 100.0 36 ................................. TCCGACAGTTATGAAAACGTATCCACGTCTGATTAC 321567 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 99.5 35 GTCGCACTCCGCGAGGAGTGCGTGGATTGAAAT # Left flank : GGGATGCGCAGTGGTGTTTATTGCCCAGCTCTACGGCGTCCAGTTGGGCCTGGGGGGCTATCTTACGGTGATTATGACTGCCACGCTGGCCAGCATTGGCACGGCGGGCGTGCCGGGCGTAGGCCTCATCACCTTATCCATGGTACTGAGCTCAGTGGGACTACCGGTGGAGGGTGTCGCGTTCATTATGGGCATTGACCGCATTTTAGATATGGCGCGAACCGCGGTGAATATTACCGGCGATGCGGTGGTTACCACGGTGGTGGCAAAGAGCGAGGGGGAATTTGTCCAAAGCGTGTACGACCGCATGGAAAAGCCCGAGGCGCCCAGCGTATCCTAGCGGTGCGAATGGGAGGTGCACATGTATTGTCGGGTATCTTCGCACCGCGAATCATCCGGAATATACGCGTTTTTTATCGCATGAATGGGGTGGCGGTTGTTCTTTAGAAGCACTGCTATAAAAAAGTTTATGTATGCCAAATAAAATGTCTTTTTAGGCT # Right flank : GAACGCGTGGGGCAGGAAGTACAGAAAATGACGGGGTCGCACCTCGCTGAGGTTCGTGGATCGAAGCACCAAGTTAACGCATATAAATCAGGCGGCAGCACGTCGCACCATTTCCTGGTAAACAAAGAAGGCCGTGCATGCATGCAGCGGCCTTCTTGATCGTTTATATGGGTTTTCAGCGCACCAGTTGGGATGAGGCGCCGTCGCGCAGGGCGCGCAGCTCCTCAATGCACTTGAAGAGGTGATCCTCCATGGTATGCTGGGCGAGCGCCGCATCGTGCTTTTTAAAGGAGTCCACAAGCAGCGCGTGCGCGTAGAGCCCACTGTAATACCCAGGGTCGTAATTAAGTAGGTAGTACCGTTCGATTTTCTGCCGGTAGATGTTCTCCATCACACGCATCACGACAGGATTGTCCGTGGCGTTGCAGATCTCCTGATGGAACTGGATATCGTACTGTACATACGCGTCCGTATCGCCCACGTGGTTCTTCATGTGCGCT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGCGAGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCGAGGAGAGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1205907-1205003 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026983.1 Christensenella sp. Marseille-P3954 chromosome contig00001 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1205906 33 100.0 34 ................................. ATGATAACCTCCAAGCCGTTTTAGTGGTAAATTT 1205839 33 100.0 34 ................................. TTGCGTCAGGTGCGGGAATATGGCAAGCAAAACA 1205772 33 100.0 34 ................................. AGGCCGCCAAGGGGCAGAAATACCGCATTGCAGA 1205705 33 100.0 35 ................................. GACGCGCGGCCTTCCGCCACCGTCGTTTCCAGCGC 1205637 33 100.0 35 ................................. ATCCACCATTTCCTTGGTATATCCGTCAACGCCAT 1205569 33 100.0 34 ................................. AAGGAAAATCTGCAAAGGTATTGTAAACATAACA 1205502 33 100.0 35 ................................. GGTCAGGACTTGCCGTCCGTCATGAAAACGGCGTC 1205434 33 100.0 33 ................................. GTATCCGTCCGCGCGCAGCGGGAGACCCGGCGC 1205368 33 100.0 33 ................................. TACCACTATGGCATCAAGGTGCTTACGCCTGAC 1205302 33 100.0 34 ................................. AATTCTATACTACAACGATATCGTTGCAATGTCA 1205235 33 100.0 35 ................................. AGCGAAGCCGATGCATGGCTTGACCTATGGTGCCA 1205167 33 100.0 33 ................................. CGCGCAATGCTGCTTGGCCTCAAGGACGACTGC 1205101 33 100.0 33 ................................. TGCTTTTTGAATCCGGCAATCTCGGCCTCCCGC 1205035 33 84.8 0 ....CA.............G..C.........G | ========== ====== ====== ====== ================================= =================================== ================== 14 33 98.9 34 GTCGTGCGCCGCGAGGCGCACGTGGATTGAAAT # Left flank : CTGGTGTTTGCGGCCACGCTGCGCAAGTATAAGCAGCTTCAGCCCGTGGGCAGGATCAACGCGCTGGAGGACCTCTTTGCCCAGTATCTCGGCGTGCCGAGGCAGGAGGCGCTCGCGTGCGCCTTCGCGCTCTTTGACCAGGTGCAGCCGAGAAAGCCCCTGCGGGATTACGGCATCGGTAGGGATGCGCTTGAGGGCTTTGCCCAGGGCGTGCTGGCGGGCCAGGGGCGCCTGCTTGCCAACAACTACGCGCCGCTTTCCCTTTCGGATATGCTGGATATCTACACGTCCGTCTATTGATATGTGTGCAATACGCCCGTTCCCAGCGCCGATTGTGCAGCGGTGCGAAAGGGAAGCGCACATGCATCACCGGATGTTTTCGCACCGCGAATCGCGGAGAAAATGCGCAGATTTTGCTGCGCGTATGGGATAGAGCGGTGCGTGTTGCCGGAATCTGTGCAAAATGTTTGACTATGTGGGATAATGAGCCTTTTTGGGCT # Right flank : ATGGCAAACATGGGCCAATCGCAGGGGATAAACCCCGCCCTGCTCACAACAGACGCACAAAAAAGGAGCCGCCGATGTGCATACGCACCGGCGGCCCTTTTTCGGCCCGCTTATGTCTCCTCCTCCATATTGTCCAGCGCGTACGCGCAGGCCTGGCGCACAAGCAGGCTAAGCGGTATACGGTGCGTTTGCGCCTCGCGCTTCAGGCGGGCGTAGAGGCCCTGCGTAAAGCAGATGGTGCGGGAAACGGTGCGCTCTTTGGCGGTTTGTTGCAGCAGCATGTTCAGAAAAGGAAGTTGATCGTGGCCCTTTTTGCGATCGTTGCCATGCATAGGATTCCCCCCAATTTTGTGATGTGAATATGGAGTTTATAAACTTCATGAAGCTTATAAACACCTTATCATATGGTGATTATAAACCCCATAATGAAAACATACAAACAAAAGCTGGGGTGAATAGATGATCATCTTTTCAAAATTGTGGGATGTGATGGCGTCTCG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTGCGCCGCGAGGCGCACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.10,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 3 2191941-2193042 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR026983.1 Christensenella sp. Marseille-P3954 chromosome contig00001 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2191941 32 100.0 34 ................................ ACTGATAATCAACAAACGAGGTGACAACAATGTC 2192007 32 100.0 35 ................................ ATGTAATAGCGGGTGTACAGGTACGGGTCGGTCGT 2192074 32 100.0 35 ................................ AATGTCTTTGTCGGCCACGAACACATTGGGGCTGT 2192141 32 100.0 34 ................................ GACCATATCCGCAAGCGGTGGAGCGTGTGGCAGG 2192207 32 100.0 34 ................................ CCCAGCAGGTATGCCGTCGATCGCGCCATAAGTT 2192273 32 100.0 37 ................................ CGGCGCCGGCATCACCCCAGCTACCGCCTGATACCGT 2192342 32 100.0 33 ................................ CACAGCCCCGTGGCCTCATCCATCGACATCCCG 2192407 32 100.0 37 ................................ GGCTCCTGGCCGTGGTTATCCAGCCACGGCATGGTAC 2192476 32 100.0 35 ................................ TGCCCGTCATGCGGTCGCTCACGTAGGTGATGCCG 2192543 32 100.0 36 ................................ CGGCGACCTCCACCCTTATATGCCACACCCCCGCGC 2192611 32 100.0 35 ................................ ATAAAGCCACTATCAACCTACCCCCAGTAACCAAA 2192678 32 100.0 33 ................................ CTAATTGAAAGGAGTGATGCTATGAAAATCCCC 2192743 32 100.0 35 ................................ TCCTTCCGGCGCGAGATGCGCCGCCTGGGTATACG 2192810 32 100.0 35 ................................ GATGTGTTTGACGCGCTGAAGCTCATGAAGCGTTA 2192877 32 100.0 34 ................................ GTGGCTAAAAACGAAAGGAGACTGTAACAATGGC 2192943 32 100.0 35 ................................ ATCGTTGTGCACCCGTACCTCCAGCGTTTCGTCAG 2193010 31 84.4 0 .......TC...-...............C..C | GC [2193026] ========== ====== ====== ====== ================================ ===================================== ================== 17 32 99.1 35 GTCGCACCTCGCTGAGGTGCGTGGATTGAAAT # Left flank : TCTGTGGAAGTGAGGTTATATGCTGGTACTGATTACCTACGACGTCGATACGACAAGCGCGCAGGGCCGTAAACGGCTGCGACAAGTTGCCAAGCAGTGCGTCAATTACGGACAGCGCGTGCAGCAATCCGTCTTTGAGTGCAAGCTTGATGCTGCGCAGTTCAAACAAGTCAAGCACAAGCTGACGGGCCTAATCGATGCATCCCAAGACAGCCTGCGGTTTTATAACCTGGGCAACAGATTTGAACAGCGCGTAGAACATATCGGCGTAAAGCCATCATACGATACGGATGACGCCTTTATCTTCTAATAAACAGCATGTATAAATACGCATTTTCGCCCGTGCGAAAGGGAGCCTCCCATGTAAACGTGGGGACTTTCGCACCGGATAAGCCCGCAAAAATGCGTATGCTGCATGTACACGTAAGCCGTAAATGCATAAAAGATGGATAAAAAAGGAGAATCGATGGCAAGCCAGGCTATTTATGCATCATATGGCT # Right flank : CGAGGGATACGGTACGGAAAACCCTGGTGCAAGAGGAGGGTGCGGGGGCGGGTTTTCCCGCCTTCGTGCATGTGCATGTTTGCCTGTGGACGGGATGCAAAAACCTTTGTCTTGTGCTACAATGAGGGCAAACAAAAGTTGGCGCAAATGTGCTGTGGGAGGTCTTTGACATGATTGATTTGCGCGGATTTGATCACGTCGTCATCACCGTGACCGACGTGGAAAAGACCATGGACTTCTATACCCAGGTGCTGGGTATGCACGCCCAAGGCAACTCCCTTTTTTTCGGCAACCAGTGCATCAAGGTGCACAGGCATCCGGCGGAGTTCCTGCCTGCCGCGCGCAAGCCGATCTCGGGCAGCGCAGACATCTGCCTGATTGCGCAAGGAGAGATGAGCGACATTGTGGAGTATTTTGTGCGCTGCAATGTGCCGGTGGAGGAGGGCCCCGTTTGGCGCACTGGCGCGCGCGGGGACATGACTAGCGTTTACGTGCGCGAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCGCTGAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //