Array 1 10650-10951 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESJD010000048.1 Rhodovulum sulfidophilum strain AB14 NODE_48_length_30230_cov_6.83862_ID_7949, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================= ================== 10650 25 96.0 45 ........T................ TCGTGAAGCGAAGCATATGCTGGCCCTCCTTAGCCTGAAGGCACC 10720 25 96.0 44 ........T................ CTCGCCGGGCATGTGCATCATGGACTGATCCTCCTGAAGGCGCA 10789 25 100.0 43 ......................... CAAGCGCCGACTGCGTAAATTCGACTCGCAACCTGAAGGCGCA 10857 25 100.0 45 ......................... ATTTCGCCACAACCAGACAATATAGTCCTTCGGGCTGAAGGCACC 10927 25 76.0 0 .................GGC.TC.G | ========== ====== ====== ====== ========================= ============================================= ================== 5 25 93.6 44 TGTCCGCACCAAGGCGGATTGAAAC # Left flank : ATGCGGAACGCATGATACCCCCACCAAACCCCGTCCAATGGTTCCGGCGATTCGCAGAGGCGGGCAAGAATGGAATTCTCCGACGTTAAGGATTTTGTTGATTTCGAAAGAGTTCCCGTGCCGCGACAAATTGCGCAAGAGGGACGGCGACCCGGACCGGGGACTGCCAGGCACCGGGATGGCTCCGAACGGCGGCGCGCCCGTGGTTCTTTCGATGCGGTCGCAAACCGGACGGTTGCCCGCGGACCCAAGGCCTGTCTATGGTCGCGCCTGAAAGCAAACCCCCGCCGACCGGTTAACGAGGCGCGATCGGCCCCAAGACCTGGGGCAAACCAGGGCAATCACCTTCAGAAGGGCATCAAGTCATTGATCAAAAATGGGAAAGACACCTTATCTCTGCGCTACCAGCGTGGCCACCCAGCGCAGATCCTGTCGCCTTCAGAAGATGCGCGTTTTTTTCCTTTCCCTCCGCGGGATACAGGGACTAACCTGAAGGCACC # Right flank : GAACAGCCAGTAGCCTTCGTCGCTTTCGAAGGGGGCGCCGTCGCCGAAGACGCGGCTGCGCTGCTCACCGTCATGGCCGATGACGTAAAGCCGCAGGCTGTCGCCCTCACCCAGATGGGCCGCCAGACGCTGGCACAGCGCCTCGGCGCGGGCGCGGCTCATGCGGGTTTCGAACACCGAATATTGCACCCGCGTCGCCGCATCCTCCAGCAGGCGCGCGATCTTGCGCCGCCGCTTGTCCGACGAGACGTCGTAGCTGAAGACCGTCAGCATCTCGCCCCGGGACATTCACGCCTCCATCCGATAGGGGCGGAACAGCGCCGGATCGCCCGCGCGTAGCGCCTGGGCAAGGTCCTGGGCCTGACGCCGCATCATCGGCCGCCAGGCCAGCTTGTGGCTGCGATCCGGGACGTTGACCCGCCGCGCCACCGCCGTCTCATACCCCGCAATCAGCGCGCGCCGCCCTTCGGTCGAGATGCGGACCCCGCCGCCGACGCCCG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCCGCACCAAGGCGGATTGAAAC # Alternate repeat : TGTCCGCATCAAGGCGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 13412-13729 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESJD010000048.1 Rhodovulum sulfidophilum strain AB14 NODE_48_length_30230_cov_6.83862_ID_7949, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 13412 37 100.0 30 ..................................... CCGAGGCCGCTGCTATCTGCATCGCGAGGA 13479 37 100.0 39 ..................................... CTCCTGCCGGAGGCAGATAAGGGGAACGTATTCAATCCC 13555 37 100.0 32 ..................................... TTCAACCATCGCTACCAGGCCGGTCAGTGCCG 13624 37 100.0 32 ..................................... AAGGATTATGGGCCAAATGGGGATTCCTTTCA 13693 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 5 37 100.0 34 GCTGAAGCCACCTGTCCGCATGAAGGCGGATTGAAAC # Left flank : GCGTCAGCACCATGGCCAGCGCCGTATGCACCACCCGGTCCGCCACGCTGGGGATCATCAGGCGCCGGTGCCCGCCCTTCTTCTTCGGAATATCGACCATACGGTAGGGCAGCGGCCGCCAGTCGCGGCGCTTCAGGGCCAGCCGCAACCTGCCCAACCGCGGGCCGGCCCCGGCCTGAAACACCGCGACCGTGACGCCGTCGCCGCCCGCGGCCCCTGCATTCGCGCGCACTTTCTCCCATGCGCGGTCGAGGCGGCGCAGTGAAAGCAGGCTTTGCCAAAGATCGTATTTCGGCGATAGAGGCATGGGCCGACCCGTCTTTGGGAAGGAAAAATGCGCAATCAGGTTCAGAAAATCAACAACTCACTGCGAACAAAACATAAAATACAGATCGCGCGTCAAACCCGGCGCAATTCAAACCCGGCATCGGGCCGGATCCGTCTTGCCTTCAGAACTGTGGCATTTTTTCGGCTTGAGCGAAAGGGATTGCAAGAGCTAG # Right flank : CGCGATCTGGTCGAACTCACCGGTGTTGAAGAGGTGAACGCCGGTCACTCCATTGAGCGAACCTGGCATCACAGGTCAGGCCACGCGATCTCGTCGTGATGCCGAAATCGCGGGCCTTTTTCCCGTTCCTCTCGCCCGCAGGAAACGTCAGCACGCAGAAAAACACGCCCCTTACCCGCTGGCGACAACGCAAGCGGCTTCAACCCGATTGCTTCGAGCTGATCACCGACACTCCGCGTGCCTTCCCCTTCGAATTCGGCAAGATGTTTGCAGGGGACATATCGCTCCAGGAAATGATCGACAGACTCGTAGGTCACAACCTTGATCGATTTCCGTGAGAGCGGGTGCCGTGCCCGAACTTGTGTCAGATAGCCCGTTTCCACCAAATACCGGACGGCAGATTCATTGATCCCCAGATAACGTGCCAGCGTGGACCGAAGGTACCCTTCTGGCTTGAGCAGGCGCAACGCCTCGGCAACCTCTTGCGGGTCCAGCCGCAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGAAGCCACCTGTCCGCATGAAGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : NA //