Array 1 58-1479 **** Predicted by CRISPRDetect 2.4 *** >NZ_CMYZ01000153.1 Neisseria meningitidis strain NM2033, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 58 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 124 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 190 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 256 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 322 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 388 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 454 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 520 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 586 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 652 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 718 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 784 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 850 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 916 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 982 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 1048 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 1114 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 1180 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 1246 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 1312 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 1378 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 1444 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : CCCTTTCTCATTTCGCAGTGCTACAATTTTGGTAAAGGTTTCTGTTGCGACCCGAATG # Right flank : AGTATTCGTCGATGATGGAAACTCGAGCATGTTGTAGCTCCCTTTCTCATTTCGCAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //