Array 1 78216-77894 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000208.1 Nostoc sp. NZL contig-31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================== =============================== ================== 78215 40 100.0 31 ........................................ TCTTTTTGAGACATTAAGTTCTTTGGTTTCT 78144 40 100.0 31 ........................................ CTAATATGTTGCGATCGCTAGGCTTGACTAG 78073 40 100.0 30 ........................................ TTTTCTGCTTGCTCAACTTCAATAGACTAG 78003 40 100.0 30 ........................................ GACTTCGGCGTAACTTTTGATTAGCGATGT 77933 40 97.5 0 ..A..................................... | ========== ====== ====== ====== ======================================== =============================== ================== 5 40 99.5 31 CTTATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : | # Right flank : TCACTCCTGAGTTTTTTATGCCAACTTTGACCTCTTGTCTTTTGACGTATATTACTAAGTCACTCACAATTTAGAAAACTTTCCCTATCTATAGAGAGATGCTTTCCTGCCTAATAAAGTTTAATAAAGAGAAAATCTACGGAATTAGTATTTCCTTTTGACTATGATAATGAAGTTTATGGGAACTGCGATCGCTAGAATATTATTCACGAATTGTCAATAATTAATATTCCATAGTGAATAAAGAAAATTGGATGGCATTAGAATCTCCATCTAAAGATTTTGGGCTGTTGAATTTGGACTTAGAGAAACAAATAAGAGTGAGTTTCAATAAAGGAATATAGGCATGGAATTTTTATCCAATTCAGTTGTGCTATCACGGATGCAATTTGCACTGACTGCGATATTCCATATACTTTGGCCCGTCTTGACTACAGGGATGGGGATTTATTTGGTCATTATCGAGGGGCTATGGCTAAAGACTCGTAATCCAGACTACT # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 46846-47690 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000032.1 Nostoc sp. NZL contig-4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 46846 37 100.0 38 ..................................... GTAGAGAAAATCGTCAATGTGTGCAAAACCTTCGATAT 46921 37 100.0 44 ..................................... TTATTGATTCAATTCCCCCGATAAGTCTGAATCCACATTAGGGA 47002 37 100.0 34 ..................................... TTATTGATTCATGGCAAACACAAGCCAGCACACA 47073 37 100.0 37 ..................................... TAGTGATAAAGAGGAAACAAAGCAAACAGTGCTTTAT 47147 37 100.0 34 ..................................... GTGATTTTAAGGTATTAACACCACCCAATGTACC 47218 37 100.0 37 ..................................... TCAGCACATAAAATCTAGTACCAAGAACGTGACAGAA 47292 37 100.0 35 ..................................... TTCGTGATGCTTGCCGATAGACCTAAGATTACACC 47364 37 100.0 37 ..................................... TCAGCACATAAAATCTAGTACCAAGAACGTGACAGAA 47438 37 100.0 35 ..................................... TTCGTGATGCTTGCCGATAGACCTAAGATTACACC 47510 37 100.0 35 ..................................... ATTAATCTTGGGGAATCGCTATTGTAAAGATGGGC 47582 37 100.0 35 ..................................... CGGCTTGCCAGGGGTGACACCTCAACAACTACAAG 47654 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 12 37 100.0 37 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCCTAACATGCCAGGAGCAGTACCTTGGACAGCAACCCAGGCACTCAACAACAGTACATTACCTTATGTCATCCAATTAGCGAATTTGGGAATTAAGGCACTGGAAGTTAACCCAGCATTAGCTAAGGGTGTGAACGTGCAGAATCATCACTTAGTGCATCCTGCTGTACAAGAGGTATTCCCTGATTTGGTAAATTAAGGTGTGCAAGTATTAGGCGATCGCTTATTTTAATAAAGCTAGTTCTCAAGAATCAGACTAATTTTCTTGCCAAATGCGCGGATGGGTAGGTGTACAAAATGAGAAGGAGCAAAAAAGGCTGCACGCTCCATCTATACAAGACTTTCAGAGAATTGTACTTTTAATCCATCCGCGCACCTTATGGGGAAAGGTTTTCAGCGATTTGCATCTGGTGCTATGACTATTCCCTATGTTATGATTCAATGGTTCGCGCAACTGCACCTTGAAAACCAAATACAGCAGCACTTTCAGATGCCAGCG # Right flank : AAAATACCCCAAAAATCAAAAGACGCTAGTAATATTGCAATTCATCAAAATCCCTATTAGGGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 29093-29780 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000038.1 Nostoc sp. NZL contig-5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 29093 37 100.0 36 ..................................... ACTCAAGCAAATATATGATGCAATAATGGCGGTCAG 29166 37 100.0 35 ..................................... ATCGAATACCGCTAAACCTACTTCGCCGTTGCCGA 29238 37 100.0 35 ..................................... CGTATTTAAGGTGGCTGGCAAGAATGCATCGTCGA 29310 37 100.0 35 ..................................... AAAAGCTCTTGTGCCTTAGAGAAAGCTGCCATTGC 29382 37 100.0 34 ..................................... TGGTGAGATTAGGATAGAGAGTAAGGACGACATT 29453 37 100.0 35 ..................................... CAATAATCCTTGAACAACATCATTGACTCGCCCAA 29525 37 100.0 34 ..................................... ATCCTAAGAACTGGCAAGCCTATTGGTACTGTTG 29596 37 100.0 39 ..................................... CATGAACCGCGCTAAAGACTTCTATACCCTGTTGCTCAC 29672 37 100.0 35 ..................................... CTGTATCCTTGGCAAGGACGACACCCAACTCACCA 29744 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 100.0 35 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : TATGTTTTCTCTGTTATTCATAGAATTAACAGACCTCATACGCAATTCTTCGCTGGAAAGGGGAACGAAAGAAGTTCTGATTAAAACAGCTTTTAGGGAGTTTGCTTGTGCAATAACAGACTTTGAAGACGTTGCCAAATAAAGTTGGTTATGGTGGCGCTGGTATTGCTTAGGCATAGCCCAACCCAGGCATCGCACTGAAGTCAGCTAACCTAATCGAGTAGGATATCTATAAGTAAGCAGCTTTCCAATCAGATTAGTTTTTTCGCTGAATGCGCGGATTGGTAGGTGTTGGGGAAGGGGTGACTACAAAAATGGCTGAATTACCTTATATACAAGAACTTGAGAGCGTTAGCATTTCTAAATCATCCGCGCACCTTATGGGGACTTGTTTTCAGCCATTTGCCTCTAGCCAACTCACAACTCCTCATGTTATGATTTCTGCATTCGCGCAACCGAACCTTGAAAACCAAATAAAGCAAGACTTTCAGAAGCCAGCG # Right flank : AAAAGCTCTTGTGCCTTAGAGAAAGCTGCCATTGCATTGCAATTACCTAAAATCCCTATTAGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 12146-10893 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000083.1 Nostoc sp. NZL contig-12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 12145 37 100.0 35 ..................................... GAGTCATTGAAACAAACATTATTTGGCAATCCTGA 12073 37 100.0 34 ..................................... ATCTTTTTTTTATAGGGTAGTGTGCTATCCTTTG 12002 37 100.0 36 ..................................... ATATATAGATGTATTTGAGATAGTGTCTATTTGCTC 11929 37 100.0 34 ..................................... AAATTTATAAGATTGAAAACGGGCATCGATTAAA 11858 37 100.0 36 ..................................... AATTCTTAATCCTACAATGCCGCTAGTTGCACCCGA 11785 37 100.0 33 ..................................... CTCTTAATGATTGGAGCATATGAAGAGGGTAAC 11715 37 100.0 35 ..................................... TAAAAACCGTGTACCTAAGTACGATAGGCCTCACA 11643 37 100.0 34 ..................................... GCACTATCTAGCTCTTTACTACTTTCACTGTCAA 11572 37 100.0 36 ..................................... GAGCAAAACCTTGATAAGCATCCAGAGCTACGTTAG 11499 37 100.0 35 ..................................... GAGAACCTTTCTGATAACAGAGCGTGCTGTACTCT 11427 37 100.0 34 ..................................... ATAATTATTTGACTCAGTGCGAGTGCTATGAACA 11356 37 100.0 34 ..................................... CTCCATAAGATAAAGCTTGTATTATGTAGTTTTG 11285 37 100.0 34 ..................................... AAACTACTCAAGTTGATATGAAAATTATTAAAGA 11214 37 100.0 34 ..................................... TAGAGATGTTAATTGCTCGGCCCGCACAGACTTA 11143 37 100.0 33 ..................................... TCATCTACATCTACATATAAGATACTGGATAAA 11073 37 100.0 36 ..................................... GCTACAAAAACACCTTCAGGCGATATTACCTATATC 11000 37 100.0 34 ..................................... GTAATAAGATGTCATACTACTTGCTTCTACTCTT 10929 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 18 37 100.0 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCGGTTCTCAAGTCTTACGGACAATGGATGCAACTGAGTGTGTTTGAGTGCGATATCACTCTCACTCAGTATGCTAAACTGCGATCGCGTTTAGCGAAATTAATAAAACCTGACACTGATAGCGTGCGCTTTTATTTTCTCTGTGGCTGTTGTGAGCGAAAAGTCGAACGTATTGGCGGAGAACAGCCACGGGACGAAACAATTTTCTTTGCTGAGTCCACTTCTAGCTAGATTTCTGTATTTCAAATGCGCGGAGGGGTAGGTGTACAAATTCGACAGCCCCAAAAAAGTGCCCCTATTGCAGCTACAGTAAAGCTTTCAACCCATTGTTCTCCTACTCGTCATCCGCGCAATCTCTGAAATGCTTATCAAAACTCGATTTCAGCCTTGAAATTTTCCTGACGCTCTTTCCAAACGAATTCTCTAATGCTATGATTGCCCTTGAATCGCGCAACCGCACCTTGAAAACTAAATACAGCTTGGGTTTGAGGCTCCCGCC # Right flank : TGAGCAAGGATGCGCGATACAGCGCTTCCGGCTATTATGCAATACAGTTTTTCTCCTTGCCCTCTCCTATCAAAGTTTTCAGATTTGGGGATGTACCTCATAGCTGCCGTAAGTGCTGTAAGCGATCGCTTACGGGTTTGGAGAGAGGTCAAAATCAATACAGTTCGGATAAGGTTTTTTGATGACACGCCGCCAATCGCAAAGATGCGATAAGTAAGTCGGTGCAATAAAACCAAACTATGTAAATAAAAGTAAATAAAGCTCAAACTCTTTCTCTCCCTGCTCCCTGCCTTATTGCAACAATAATTATTTACGCCGACTTACTTAAATCGCCGTCTTTACAATAATCAGTCCTTTGTAGAGACGGCGATTTATCGCGTCTCTTGCCTTAACCGAACCGTATTGAGGTCGAAGTGTATTGCATACAAACGAGCGATCGCGGTATATTCCTTTCAAACAAAAAAATGCAAAAATGAAAGGGTGAGCTGCTGCCCACCCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 1-1970 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000132.1 Nostoc sp. NZL contig-19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1 37 100.0 35 ..................................... CACAAAAAAACGCAGCACTTCAACCGGTTTACCCA 73 37 100.0 34 ..................................... TTATTTTATTGACATAATAAGAACTATCTCTTAA 144 37 100.0 33 ..................................... GAATCGCTTATTAAAACTCAAGATGTAGAAGTA 214 37 100.0 32 ..................................... TAAATTCAAGCTTCCCTCTCTACCCACTCTGC 283 37 100.0 34 ..................................... GGAGCGTGGTTTGCAAGGTGAATTAATTAGATTG 354 37 100.0 34 ..................................... GAATGGTACAAGAGTTTTACTTCTCCCCCTCTCG 425 37 100.0 35 ..................................... GGTAAAGTTTTGGTGGAAGATGTCACCAAAATCGA 497 37 100.0 35 ..................................... CATTATTTTAAATACCTTACTAAATCAGGGTTACA 569 37 100.0 34 ..................................... CTGAGAATCTTCAAGTATTTCATGACTCGATTGG 640 37 100.0 31 ..................................... CAAAATGATAACGCCACAAATATCGAGTGGA 708 37 100.0 36 ..................................... CACCACATTGATGGCAACCAATACAATAATGCCATT 781 37 100.0 34 ..................................... TTGACGGCAAGGTAAGCGACTTGGTACAAATGGC 852 37 100.0 34 ..................................... GTTTTAAAATCCTGATTTGAGTGTGATGTGTAAA 923 37 100.0 35 ..................................... CAGTTAGCAGCAAGTATTTATGTTTCCCAGTACCA 995 37 100.0 35 ..................................... GCTAGTCCTACTGCTTACCTAGCATAGGATTTAAT 1067 37 100.0 40 ..................................... TTTTGATTCTCCATCCATTCACTTATAGATTTACCATCAG 1144 37 100.0 34 ..................................... AAAGTATCACTAAGATTAAGGATTGTTAACGTCA 1215 37 100.0 35 ..................................... AAGTTCAAGGACAATTATCAATTGAATTTTGGTAT 1287 37 100.0 38 ..................................... TTATGACGGCGTTTACTAATGGGCATATAAGTAATTTT 1362 37 100.0 35 ..................................... AATTTCTACGTAAGAAACAGTAAAGCCCCCAACAG 1434 37 100.0 35 ..................................... CTTTCCATACCTTGTATTGTTTCTGATGCGGTTGA 1506 37 100.0 33 ..................................... GCCAGCTTCACCAGCTATTCAAATCCTGGTAAC 1576 37 100.0 32 ..................................... TTAGCAGTGCGATGCCTGTCCAGCACTGCTAA 1645 37 100.0 35 ..................................... GGGAAATTAAATATTTCTCTTTCTTGGCGACAAGA 1717 37 100.0 35 ..................................... CACTATCCAGCTACACGATACATTAAAAGAACAAA 1789 37 100.0 35 ..................................... TTTAAGTGCTTCTAGCGGTGAACCAGCTAAAACAT 1861 37 100.0 36 ..................................... GAATGTATGAGGCTAGAGTTTCGGGGCTGCTACCAA 1934 37 75.7 0 ..........................ACCCAA.TTG. | ========== ====== ====== ====== ===================================== ======================================== ================== 28 37 99.1 35 ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Left flank : | # Right flank : CTAGTTATCAAAAAACGCTTCTTTTTTAAATACAAATATCTAAAATTTAGTATCTAAAAGTACTAAAAAATGGAGTTTTTGTATCTTTTTGATACCATTATGTGACACTAACTAGCAACTTACGTTATTAGGGATTGAAACCCGGTGTAATATCTGGCACATCCTTCTTAAGCTGACAAAATGTTTGGTATGATTAAGAAGTGTAAAGTTATGTTACACTCAGTTACGAGTTAGGAGTCGAGCGCAACCGACATCTGACAACAGGCCAATTTATCAAACATTCCCATAGAACTCAGAAAATGACTCTATCGATTCGTCCCGATCTAACTTCTGCCGATCAGGTACTGTCATCTTTAGCGACTGGGCAACAGCAAACTGTAACAGAAGCTCAAATGATGCAGGCTGTGCGTACTTTGCTGATTGGATTAGGAGAAGATCCAGACCGCGAAGGACTAAAAGATACTCCGAAAAGGGTGATGAAAGCCTTACAGTTTCTCACA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTACCTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 49860-49028 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000116.1 Nostoc sp. NZL contig-2000016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 49859 37 100.0 35 ..................................... TTCTACAGGTTCATCAGCCTTCGCTGCGATCGCAC 49787 37 100.0 35 ..................................... GGCAATTCTAAATCCTTGGATTTTCCAGTAGACTT 49715 37 100.0 34 ..................................... AGTACGGGCGTTGCTTCTGCGGATTTTAAAGCAA 49644 37 100.0 39 ..................................... CACTCATTTGAATGCAATCATTTAGTTGAGCGATCGCAA 49568 37 100.0 35 ..................................... AAAATTTTTCCTAACCTAAAATGAACAATGACCAA 49496 37 100.0 34 ..................................... AAAATATAGGCTTTGATCTGCTGTTCCTTAGACA 49425 37 100.0 33 ..................................... TTTGATTTTCTTTTTTGTTGCTAACTTTTCTTA 49355 37 100.0 36 ..................................... GCTACCTATTCTGATACTTGTGAAAATGGAAATTAT 49282 37 100.0 35 ..................................... GTGGAATTTCAACCGTACAACCTGGATGCACTGGT 49210 37 100.0 36 ..................................... ACTTCTGGAAAAGCGATCGCCTTTGCTGAATACAAA 49137 37 100.0 36 ..................................... CAAACTCGTTTATGTACAAGAGGATCGGGTAATGGC 49064 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 100.0 35 ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Left flank : CGGCGTGTTATTTCTTTCATCATCTCTACCTTGAATTGGCGAAAATCTTTATTTATTCTTTGTTATACGTACAGTACTACGACAACAAATACTACAATTTATGAATTAGTTTACCGTAATATTAGCTTCGTTTACCATCCAAGCGTTCTTGCTGTGTGGCTGTTGTCAGCGAAAAGTCAGACGTATTAGCAAAGAAAAGCCACGGGACTAAACAATTTTCTGTGCTAAGTTCCCTTACAGTATGGTCAAATGCGCGGTAGGGTAGGTGTACAAATTCCAAAGCCGAAAAAAAGTGCTTCTATCTCAACCCCAGCAAGCATTTCACCCCACTAATGCCCAATTTTCATTCGAGCAATCTCTGAAATGCTTACAATCAGTAGGTTTTAGCCTTCAACCTTTCCCGACACTCTTTCCAATCCAATTCTCTAATGCTATGATTGCTCTTGAATCGCGCAACCGCACCTTGAAAACTAAATATAGCTTGACCTTTGGCTCCCGCT # Right flank : CATACTGATTAAAGGTTGTAGTACACTTCAGTGGACTTACGCTATTAGCCAAGAAATAAATTTCTTGGCCGAATGTTGGTAGGTGCAAGATATAACTAAAGCCTATCCTTTACTTTATTGACTGTATCACTTGCAAACTACCACCAGCATATAAAGTTGGCTCACTCACTTCAAACCCAATCTCAGCCAATAATCCAACCAAATCAGTTTTCAACAATTCCCAAGCTGTCTCTGTTTCAAACAACAGCAAAAACAGTGATACCCCAGGCCAAAATATCGGATTCGTAGGAGCATGAAAATCCACCAGCGTAAACACCCCTCCTGGCTTCAGCACCCGATAAACTTCATTAATAATTTTTCGTAATTGCTGAGGCTGCATCTCGTGTAATGCAACGCTGGTATGCACCACATCAAATAGATTATCTGCAAATGGCATTTCCTCAGCAAAAGCTTCGACATAGGAAGCTAATGGTACATTTTGCCGTGCCCTTAGCAAAGAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 46126-45813 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBKL01000210.1 Nostoc sp. NZL contig-2000031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 46125 37 100.0 34 ..................................... GTTTATGTGTGGAGACACATTCATTGAGGGAAAT 46054 37 100.0 34 ..................................... GCTGCATTGGAGGACATCCCCCTGCAACCCTCAT 45983 37 100.0 31 ..................................... TTATAGTATCCTTGCCTATCGCTACCTCAAA 45915 37 97.3 29 ..........T.......................... CATTAATGGGCATGGGAGTGCGGTCGCCA 45849 37 86.5 0 AT.............T......CA............. | ========== ====== ====== ====== ===================================== ================================== ================== 5 37 96.8 32 GGTACAATGACCCTTCCCGTGTTGAGCGGGTTGAAAG # Left flank : CGAGATTTAGCGATCGCTGCTTACCATTTTCGTCAAAATAAATCTTAATCTTCAGATTGAGCAAATATACTGAACCTTGACAATAAAATAAGTAATAGCGCCGCAGTTCATGTTCTTTGTAACCGCTGAACTGTGAAAAATATGGGGTAGTTTGACTATTGGAAGATAGTCTTGCTTTCTGACCCTAGTAGCTGCTCACCCTGATGCTGCTGTCTCCAGACAGGAATAAGGTGCGCTCCCAGCAATAAGGGCGCAGATATACTGCTGTAGTGGCTACTAAATCACCTCCGACCAAGGGGGAACCCATACCAATCCTTGTTTTCAGGCATTAGAAGAGATTAAAAATTTTCAGTCGATTCGCGCTTGCTTGCGGTGAAAGGGTTTTAGCGTTTAATGGCACACAAATTGCCCATTCAAACGGTAGTTGAAGAAGGGTGGAATATAGATCCGCGCTATCAACTCTGGAATCCTTCACAAAACAAGGATTCTATACAGGAAGG # Right flank : AAAATTTTCTATATCGACCCCAAGGGCGATGGTAAGTTACAATTCCTTCCGGCAAAAATGGATTGAAGATGTAATACCTAACGATGAGCAAGAAAGGACAAGTTATATAAATTTTTCCAGTGCAGGGCTGGTGAAAATATAAAGATTACGAGATATGGGTATGGGTTGAAAGGGTTCAACTCCAACCTGCTTAACTATAAAGAACAAAAGTTCTCTGTTTAAGTAAGGTAGAGTAAAAGTTTTTAGAGCTTAAGTTAAACTTAAGCTTATGGTCTCCTATTTGGCAAATCTGATGTTGACCTGTCACCGCTCAAAGTCGATAAGTCACTAATATTGCGACATTAATTTGTGAACGGTTGTCTCAAATGAGCTACGACAGCAATTAGTGAAAGAGCGACATTAATGTGTGAAAAACGACATTAATTTGTGAACGGCGACATCTAATTTGTGAATGTACAACTAGGAGCTGAAACCCTTATATAATCGTTTTTTTAAAGTGG # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTACAATGACCCTTCCCGTGTTGAGCGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //