Array 1 13076-13266 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEX01000013.1 Enterococcus cecorum strain PS2 Contig_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ============================ ================== 13076 26 100.0 28 .......................... AAGGTGGTGATACAGGTATAACAACGCT 13130 26 92.3 28 ...G...................T.. AAGGAGGCAATACAGATACAACAATGCC 13184 26 100.0 28 .......................... GAAGCAGTGATACAGGTACAACCCCACC 13238 26 80.8 0 G.T....A....T.G........... | TA,C [13258,13261] ========== ====== ====== ====== ========================== ============================ ================== 4 26 93.3 28 ACCAGAACCAGGAGATAGTGGAACTG # Left flank : CAAAAAATTAATCAATATCAACCGTTTCTTCCCAATCTCAATCGAAGTGACGAAGCAGTTGTCTTTGCTAGAGAGCTTGATTATCAAATCGGAAAATCAATAATTGGCTCAGAAGAAAACAAGCAGTTAAAATCGTTATTCACAAAAATTGAGCTTTCCTTTGGAAAAGAGATAATGAATGATCCGAATAATGCACATTTGAAGAAGTTATCACTATCACTCAACGAACCAAATAGGCAACCTACTCAATCACAAGAAACATCTAAAATACAATCAGCACCACAACGTTCAATAAAAATGCCATCAATGTAAAGGAGAAGAGAAATAATGAAGAAATTTATATTAAGTAGTTTGTTTAGTGCAACTTTATTAGTAGGAGGTGTGTCTCACACTGCTTTTGCGGAGGAAAATTTACCTAGTAATCCTACAACCCCACCAAGTGAAGAAGTGATTCCACCGTTTACTGAAGACAGTACAAGCCCAAGTGATCCAGTTCTTCC # Right flank : GGCGATAGTGAGCCAAGCCAAGCAACGCCACCAAATACAGAGAATAGTAATGCAGGTAGTAGTGATATCAATAAACCAACCTCACCAAGTTCAGAAAATACCGACACTGGACATACAGGAACGACTCCACCTACAACTCATGTGGGAGTAAATTCAGACGGGACGATCAATTCATCGGGAAATGGAGCACAAATGACTCCTATTCAAACGAATGATGTGAATGAATTGACACACATTCCAACAGCTTCTACGCCAGTTGAAACCGATACGGGAGAAAAAATCGTTTCCGTTGTAGACGGTGTGGCATACAAACAAGCAAATGATGGAACGTTGACGCCTATAACGGCAGAAGTGAAGCAATTACCTAGTGGAAATATTACAGTCAAAGGATCAGATGGCCAATTAAAAGTTCTACCAAAAACAGGAACAAAACAAACAGTTATGATGACGGTATTAGGTAGTCTTCTCACGTTAGGTTCAGCTTTTGTTTGGTGGAAAAA # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCAGAACCAGGAGATAGTGGAACTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 1972-293 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEX01000020.1 Enterococcus cecorum strain PS2 Contig_20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1971 36 100.0 30 .................................... ACGTTCAGCTTGTCTAATTGCGCTTTCATC 1905 36 100.0 30 .................................... TTTCTCGTTCAATTCGTGACTTTACAATGT 1839 36 100.0 30 .................................... GAAAGACATTTACAGTTTAGCAAGTTTACT 1773 36 100.0 30 .................................... AAGTAATTCCTTTTGTACGTCTGTATGTTT 1707 36 100.0 29 .................................... ATTTGCACGTCGTACACTTTATTCGCTTC 1642 36 100.0 30 .................................... CTTTTCGTTTAACACATCTTTTGCCACATT 1576 36 100.0 30 .................................... ATTTATCTTCTTGCCTTAATGCCTCTATCT 1510 36 100.0 29 .................................... GCCGTGAAAGTTGGTCAAACGTTCGAGTG 1445 36 100.0 30 .................................... TATACTCATCAGGTTCTGGCGTAGGTGTCT 1379 36 100.0 30 .................................... CATTCCCATAAATTTCGGTTACTGAATCAT 1313 36 100.0 30 .................................... AAAATAATCTCAAATATTTTTGTGTACTCG 1247 36 100.0 30 .................................... AGATGATGATGAGCGTTTCAGTCCTTATAC 1181 36 100.0 30 .................................... ACCTGTCGTGCGATAATACTTCTTACCTTG 1115 36 100.0 29 .................................... ATTCGTATCTAGTTGCTACTGACGGCTCC 1050 36 100.0 29 .................................... TTTAAATCGTGCGTTTATTAAAGAAATTA 985 36 100.0 30 .................................... GCTAATGGCAAGCTTTACGCATCTACCTGA 919 36 97.2 30 ...............G.................... ACGCATCGTGAATAATCGAGCCCTCGCGCT 853 36 100.0 30 .................................... TGATAAATTCACGTTGTGGTTCGAGTTTTT 787 36 100.0 29 .................................... TATTCATATGTTCAAGGGTGGAGTTGGAA 722 36 100.0 29 .................................... AAGTCTTGCATTATGTGAACACCCCCTTT 657 36 100.0 30 .................................... TTGATATAGTGTTTATTGCAGGTGTAGACT 591 36 100.0 30 .................................... AACAAATGTTGAAAGGAAAAGCCGGAGTTA 525 36 100.0 29 .................................... ATACGAAACATGGATAGTGATCTGCGTGA 460 36 100.0 30 .................................... TCGCGCCAGAGCCGTAACTAGGCACTCCGT 394 36 100.0 30 .................................... TTGCGTGTCTACCGCTACTCCGTCAAGATA 328 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.9 30 GTTTGAGAATGATGTAAATCAATATGGTTACTTAAC # Left flank : GTTTATCAATGAGTTATTCAAGGAAATCAAAGATATCGTTCAATCTGGTGAGTTATACGAGGATTATATTTTTGTGAAATCTGAGTTGGTGAAATTAATGGAGCGGATATCAGAAAGTAATGATTATCCGCTTCAATATAGCGAAGAACTTGAAGTGAGTAGTTTATTAAAAATGATGCAAGTTAAGTTTGACTTTCAAGATGCGAATTATTTTGAAAGATTAATTACATTTGTCCAATTATCACAAAGATTACTTAGAAAAAAATTACTAATTTTTGTTAATTTATCGAGTTTTTTATCCGAAAATCAATTAGTAGAACTTGAAAAGATTGCAAAATATGAACAAATAAAAATATTGCTAATCAATAGTTATCAATTAAACTATTCTTTTTCGTATAAATGGTATATTATTGATGTAGATGGTTCTGAAATTTATTAGAGTCATTCGTTAGGAACTATATTGTTTGATGTGTGATGGCATCTTCATTTTTGAATTTGAG # Right flank : CAAGCAATTGGTTTTCACGCACTTCACGCAGTTTGAGAATGATGGGCTCTTTGTCAAGTAGTGTTGTTGGCAATTAAGTCGATTGGAGAGAAAGTTATTTTATGAATGCTTTCTCTCTTTTTTTATTTTCTTTTCTTTTTTCAATCGACGCTTATGTACGAACAGGTGGTTGGAGCTGTGCAAGGGTGGACTTGTCCACTTGCGTAGCCCTTGCACAGCTGATAAAGCCATCTGTTACACTTTGATTGCGATTGAGAGAAGGTTTTAAGCAGTTTTTCGTCTACATTTTCGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAATCAATATGGTTACTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 244-872 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEX01000046.1 Enterococcus cecorum strain PS2 Contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 244 36 83.3 30 AGACCC.............................. ACAAAAATGAATCATATTTCAGAAATTCAA 310 36 100.0 29 .................................... AGAGTTTAACTCGTACATTTGGGATGATA 375 36 100.0 30 .................................... ATACTTCCATATTCGCTTGTGTGACAAATT 441 36 100.0 30 .................................... CAATTAATTTGTAATTGTTAATCTTTGAAA 507 36 100.0 30 .................................... TAGTAACTAAAACGAAAGAATCTACTACCA 573 36 97.2 30 ...........C........................ GTAAATCTACCCAACCTGTGTCATATAGCA 639 36 100.0 30 .................................... CACACCCGGATACGGAAAACACAGATACAG 705 36 97.2 30 ...........C........................ GGACAAGCAGTCATAAAAAATGTGGTTGCT 771 36 100.0 30 .................................... TAATCATCACGACTATCATATCGCCAATAG 837 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 97.8 30 GTTTGAGAATGATGTAAATCAATATGGTTACTTAAC # Left flank : AAGTGCATCCGTATAAGTAGGGAAAGTAATATTATCATCCTTAATGTTGAAGATATTTTTGATAAAAGTAGTTGTACTTTGACAGGTTTTTTTGATATTATTTAGTAAAGACATCTTGTTTCACTCCTTAAAGGTTTTGGTCGACTTAATTATAGAGGAAACAGATGTCTTTTTCTATTATTTTGATGATAAAAAAAGATATTCAGTGTTATCCCCCATTTGAGTAACAACACTAAATATCATA # Right flank : CTTGCTAAATCAATATCCACTAGCATTGCCTGTTTGAGAATGATGTAAACCAACCTCCCCAAGCTGAGTGATTTTTGGGGAGGTTGGTTTGGTTAGGTTATTCTGCGAGTTTTACGATTTTGGTGCCGTGAAGTTCGTGAATGCCGAGTTGGTGGGCGATTTCTTCGGCGTTTTCGTAAGTGATTTGTCCGCCTGGTAAGATGGTGATGCGACCAGCTGCGTAGTCAATCAGTTCTTTCAAGCGTGGGAGAGTGTCTGAGATGGATTCACTCATTGGACCACCATGGGTAAGTATACGATGGACACCGTGATCAGCTAACCAGTCAATGGCTTCAAATTGGCGTTCGACGGGGATTTCGTCAAAGGCCATGTGGAAGGTAATCTGTAAACCTTCTGCGACTTCAATGAGTTCTTCCATTGCCTCTTCGTCAATCCAGTTACTTGGAGTCAGACAACCAAAGACCACGCCATCGACACCGAGTTTTTTCGCTTCAATCAGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAATCAATATGGTTACTTAAC # Alternate repeat : GTTTGAGAATGCTGTAAATCAATATGGTTACTTAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //