Array 1 304135-303781 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRFD01000011.1 Anaerocolumna xylanovorans DSM 12503, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 304134 30 100.0 34 .............................. GCCAGGTACCTGGCCAGATAGAGTTTAACTACGA 304070 30 100.0 35 .............................. TGCGCTTTGTAAATGCCGCAAACAAGGCAATAACC 304005 30 100.0 35 .............................. AAGACAAGAGTAGCTTATGGAGAGCACAGCAACGG 303940 30 100.0 35 .............................. TCCAAGATATTAATTGTTCTTGATATGCTATCTCG 303875 30 100.0 35 .............................. CGGCGAAGATAGTAATATCCCAATTTTCGGCATCA 303810 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 6 30 100.0 35 ATAGAACCAGAACATGAGATGTATTGAAAT # Left flank : ACTGCCGCTTGCAATAGCTCCTGTGTTATATT # Right flank : TTTTAGTAAAGAAAAAGCTGTGAAGGCTGTGCTCTATCTGGATGCACAAGTATTAAACTCCGACAGGTTAAGCATGCTGATAAACGAGGAGCTGGCAAAGCACTCTTTTATTACGGGGGTTTACTGTATAAATGAGGTAGACAAGACTCTGAAAGGGATGGAATGCATGGTTACTGCAGATTGTGCTATTTTGGAACAGATATAATAAGTTATTTTAACTTAAATAGTTATTTACTAAGAGACAATATTCCTGATTTATGGCTGATGATTTTCTTAGCGGAGGTTTTAGAAAATGGATCAGGAGACTGGAGCCATTTGAAAAAAGAAATTCATGGGAGAATTTATTCTTATTAATAACCAGCAATTCGCTAAATTCCACTGCTATGTATCCGTTATGCAATGCTAAAGAACTTATGGAATGGCTTAAGCAGCATACATTTTAATAAAAAGGGTCATCTCATTTTCTTAGTTCGATAAAAAGGAGTGGTCTGTTTTCTCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGAACCAGAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 59818-59599 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRFD01000008.1 Anaerocolumna xylanovorans DSM 12503, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 59817 24 100.0 41 ........................ CACATTAATTTGAAGAAGGCAATTAACCTCTGTCAGTTTCA 59752 24 100.0 41 ........................ CTTTTGTAAGCTCTTATCGGCTTTTCTTCTTCAAAGTTTCA 59687 24 100.0 41 ........................ AGGAAAATGAGTACAAGATTTTTTAACCCAAGTCCGTTTCA 59622 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 4 24 100.0 41 AATCCTTATAGGTAATCTATAAAC # Left flank : TCTTTGTTGCAGGTATCATAACAGTAACCTTGCATTTTAAGGTTGCAGTCTTCTTATTCTTATAGGTTATCTTAAGATTTATATTGGTTGTTCCCTTGGCTACTGCTGTTACATAGCCTGTTTTAGGATTTACAGTTGCAATTTTACTGTTAGATGAAGACCATTTTTTTGTTTTTACTTTTGTATTATCCAGATTTTTAACGGTTAAGGTAAACGTGGAACCAACCCCTACCAAAGATCTCTGCTTAGTCGACAGAGATGGTGCAGCTGCTGCCTTAACAGTTATGGAACCTACCGAGGTAAGTAATGGCAATAACAGCGCAGTAATCAAAAAGGCTGCCAATACTTTTCTCATCCCATTTTTCATATCATTTCCTCCTGTTCTTATCGTAGTTTGACTTCTATTATTGTACATCATAATGGCTTATTTTGTCAAAGTCTTGTCAGAATTTATAAACATTGTTCGTAGAATTCATGACATTCACATTCGCTTGTTTTTT # Right flank : TAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCTTATAGGTAATCTATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 322198-322489 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRFD01000008.1 Anaerocolumna xylanovorans DSM 12503, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 322198 30 100.0 36 .............................. GAGATACAAATAACAGCTTATGCCGGATGCGGATGG 322264 30 100.0 35 .............................. CTCATATTTTATTCCTTTCTTATGTGTTCCGGCTG 322329 30 100.0 36 .............................. TCCAAGAACGTTAAAAAGAGGATATGCCAGCATATA 322395 30 100.0 35 .............................. CTGCATATTTAGATGATGACAATGAAGCGGATACA 322460 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 36 ATAGAACCAGAACATGAGATGTATTGAAAT # Left flank : TTAAGGAGGGGATGTAATGGCAGCAAATAAGAAAAACATGAATTATAATTATGCATTCTTGTTTTATGATGTAAATGAGAAGCGAGTGCAGAAGGTTTTTAAATTGTGCAAGAAATATTTATCCCATTTTCAGTATTCTGTTTTTCGAGGTGAGATGACACCTTCAAAATTAATCAAATTAAAGGATGAGTTAAATAACGTAATTAATAAAGAGGAAGATTTTGTGTGTATTATAAAATTAATGAATGATAATGTATTTGTTGAAGACATTTTAGGTTCGCCAAGTAAAAAAACAGGTGAGGATTTAATTATATAGAATATAAAATACTCAACCTTTTATATTTACCAGGTAAAAAATGATAATACAATGACAACCTGCTAAATATAAAGCTTTCTTGATTTTAACAAAAAAATATCTTCGCCTGGTAAAATTTGAGATAAGTATTGAATTTACTGGAAAATAGGAGTAATCTATATTCGTATATGTAGTAAATATGCGG # Right flank : TAGT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAGAACCAGAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 26680-26910 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRFD01000010.1 Anaerocolumna xylanovorans DSM 12503, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 26680 30 90.0 36 T...A.........A............... TCTGATAAATCGGATTCTATCCCCGACAACTTTTGA 26746 30 100.0 37 .............................. TGTATCTGTAATGTTCGATTTTCTCATAGGCAACCTG 26813 30 100.0 38 .............................. CTATCCCCAATAATTTTTGAAATATCATTCATTTTATG 26881 30 96.7 0 ..............A............... | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 96.7 37 GTTTCAAATCCTTAGAGGTAATCTATAAAC # Left flank : TATTCGTGACAGTACTTATCACTCCAAAGCTGAACTTCAATATATGTGTACTGCTCTTTAACGCTGCTTAGAAACCAGCTGGCATCCCCATTAGATTTGAACTTATGTTACTAAGCGGTAATTTGATGATTTTACCTTTATCAAACCTATTGTATAACCATTCTTCGGTTCTGATTCTTCACGGATAATAATTTTCAAAATCTGCAAATCGACCAAATGCTGTTCCGTTATATTTATTCGATAAATCTTTAGTCTTTGCAAAAGCTTCTGTCTTTGATAGCCTTGTAATACTATTTAAAGGAGAATGATTTTGATTACAATAATTTATTTATAGTACATGTCTCCTGCCTATCTTACTAACCATGCAATCGTATATTATATAAATCACCTCGGGTTTGCATTTGCCAACAGATACGAATTAATTTGTACTATTAATAATACACCTAGATACATAATTTTACCACATCAAGTAATGTATGAATCAGTTTTTTCCAAAGTTG # Right flank : CTTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATCCTTAGAGGTAATCTATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //