Array 1 683851-683463 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849628.1 Acinetobacter baylyi DSM 14961 = CIP 107474 acMah-supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 683850 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 683790 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 683730 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 683670 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 683610 28 100.0 32 ............................ ATTCACCGTGACACGTGTACCCGCCGTTTCTG 683550 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 683490 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : TTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 715924-717510 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849628.1 Acinetobacter baylyi DSM 14961 = CIP 107474 acMah-supercont1.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 715924 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 715984 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 716044 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 716105 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 716165 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 716225 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 716285 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 716345 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 716406 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 716466 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 716526 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 716586 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 716646 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 716707 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 716767 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 716827 28 100.0 32 ............................ TTCCACCAATCAAGAGTGGATTGGTCAATAGT 716887 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 716947 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 717007 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 717067 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 717127 28 100.0 26 ............................ TACTCGAACTTGTCTGTCATATTGCC 717181 28 100.0 32 ............................ TGAATACTCAAATGACAATAAACAGGATAAAG AC [717184] 717243 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 717303 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 717363 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 717424 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 717484 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.3 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCTAAATCATTAGGTGTAAATGCGATCTGCCGCTGAAGATTACTGATTTCAATCGTATCTGAGTCAATGAGGGTAATTTTGCCGACCCCAGCACGTGCAAGCAACTCAGCCGACGTACAGCCAATTCCACCCGCTCCAACAATCAAGACATTGGCAAATTTTAATTTTTCCTGAGCATCAACATCCCATCCATCTAGTAAAATTTGACGGCTATATAAATGCATTTCTGCATCGTTAAGCTCTAAATCCAGATTGTCCTGATCGTTCACTCGCGATTATCCCAATTTATGAATACTAAATTTATAACTATAATTATAAAGAGAAGCTTGTGTCGTGAGATGTTTTATTTTGACAAAAGTAAGCTTTTACCCCAATATTTTATTTACTCTTTAACAGCCAAATAAAATCAAAGACTTAGTTAAAGTCAAAATAAAATGGGTATTTCCATTTTATTTGCTTTAATGGATTGTTTATATTAATTATTTTTGCACTTTCTTACT # Right flank : CAAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 795294-798500 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849628.1 Acinetobacter baylyi DSM 14961 = CIP 107474 acMah-supercont1.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 795294 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 795354 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 795414 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 795473 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 795533 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 795593 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 795653 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 795713 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 795773 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 795833 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 795893 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 795953 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 796013 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 796073 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 796133 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 796193 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 796253 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 796313 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 796373 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 796433 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 796493 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 796553 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 796613 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 796673 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 796733 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 796793 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 796853 28 100.0 32 ............................ TGGATCTCTGCAGAAATCACATTGTCCAAATA 796913 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 796973 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 797033 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 797093 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 797153 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 797213 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 797273 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 797333 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 797393 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 797453 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 797513 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 797573 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 797633 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 797693 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 797753 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 797813 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 797873 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 797933 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 797993 28 100.0 32 ............................ CAAATGTAATCAGGATTAGTCGATTGCAGCGT 798053 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 798113 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 798173 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 798233 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 798293 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 798353 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 798413 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 798473 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 54 28 99.9 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : AGCATGTGATCACTAATGATTCGGTTTTTGTTCGTCATCGCATAGATGATTTAGAAATATACTCCTTATATGTAATTTACGCGTAAACCGTTCGTCATCGCATAGATGATTTAGAAACACTACATTTATACCCGCCGTTTACGCTCTTAGTTCGTCATCGCATAGATGATTTAGAAAGTTTAATGTGGCGTTCAGGTCTTGTTCGCCAAGTTCGTCATCGCATAGATGATTTAGAAAACTCAGTTGACCAATCTTACTGCTTCACTTAAGTTCGTCATCGCATAGATGATTTAGAAAAGAAGATTTGGTGGGCAAAAATATGGAATATAGTTCGTCATCGCATAGATGATTTAGAAAATTCTTAGCTGCATCACGCAAGATTTGCTTTTGTTCGTCATCGCATAGATGATTTAGAAACTCATCGNNNNNNNNNNGCTTTTGTTCGTCATCGCATAGATGATTTAGAAACTCATCGAAACATACATTGAGAAAAATCATTT # Right flank : ATATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //