Array 1 3955-3324 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHLEN010000014.1 Lactiplantibacillus pentosus strain LA0445 assembly_contig_14, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	============================	====================================	==================
      3954	    28	 100.0	    33	............................	TAACGACAATGCAGACCAAACCAGTCAGACTGT   	
      3893	    28	  96.4	    33	..G.........................	CAGCACATTGATGGATGTGCAAACAGCGGTTCA   	
      3832	    28	 100.0	    33	............................	TGACGCTATGAAAATCTTAGCTTATGACAATTA   	
      3771	    28	  92.9	    33	..G....................A....	CATTGCACATGTGGCCAAAACGTCGACGCCGTA   	
      3710	    28	  92.9	    33	..G....................A....	CATTGCACATGTGGCCAAAACGTCGACGCCGTA   	
      3649	    27	  82.1	    36	..G............A..A..A...-..	CTTAACGAAACCGTATTCTGCTGATTTGTCCTGGCA	
      3586	    28	  89.3	    34	..G........A...A............	TTAACACGCCGGTAGTCCCGTTTTTGGGGGATTG  	
      3524	    28	  85.7	    33	..G...T........A.....C......	CATGACTGCGCACTATACTGAGTCAGCCCGACT   	
      3463	    28	  78.6	    33	..T.....T......A.A..A.....T.	GAGGTGCACTCTCGTGAGAAGCGTAGACGCTAG   	
      3402	    28	  82.1	    23	..G...TT...........A...C....	TCGCTGAATCGATATCCACCATT             	Deletion [3352]
      3351	    28	  78.6	     0	T..............A......CAG..T	|                                   	
==========	======	======	======	============================	====================================	==================
        11	    28	  89.0	    32	CTATTCCCCGTGTATGCGGGGGTGATCC	                                    	       

# Left flank :   ATATTAGACTGCCGGGGTATTTATAATTCATTGCACACTAATTTTCGCCACAGCGCTAGTAACTGGAACACCAGCGATAAACGCTTGTACGGCGTGAAACATATGGCTAGTCTGATAAGCTGGTATATATCCATCTTTAAAATCAGAGTAATACCGAATGCTCCCCCAAAAAACATTCGTTAGTTATTCATTACTACAAACGCTCAATCAGTAAGACCGATTAATTTGCGGGCAGCAAGCTATTGGATTGATTTTTTAAAATTCCGGATATAGTTCAAACATTCACGCCTATTAAACGTGGTTATAATCATGTATATCTTATATTAACATTTAGAAATTAGAAAATCATCTACAGTTTTGTTGCGTTTCATTGCAGACATTCATCTTGCTTGAAATCCCAGTTTCTTGTATAGTCCTAGTTGTAGATGTCAATTCAACAAGTTGATGTAAATTTCGGATTTACTGATTTCATATTGTTGATATAACGGGATTTGTTTAGT
# Right flank :  TGTACCGATTCATGACATAATCAGCATTGCTATTGTCTCTAACACATACAGGACTATTTCAGCATTTATACAGAGCGATCAACAACATCACTTCATCAACAGGGCAATTTGACTTCTATGAGAACCAATGGCTAAAATTTTAAGTTCACACCACCAATCTTCCTTATGAATCAAACTTTCATTACACAAATAGTGTATCTCTCAGATGTGTTCTAAATTTTTAACTTTTCTACCTTACTCAATGCCTGAGCTAATGCCAACGTCGCCCGAGCATCTTCTAGCGCATGATGTGGTTTTGAATTCTCAATTTCGTATGCTGACAGTACTGTCGCGAGCCGATAGTTATCTAAAAACGCATTAGTACGCTTCACAATTGGCATCAAATCCATGGTTTGACTTCTTAACGCTTCCAAATTATTGCTGATAAACGCCTGCTTTAAGAAGGCCTCATCAAAATGAAAATTATATCCCACGATTGCGCAATCACCTATGAAAGCATT

# Questionable array : NO	 Score: 4.97
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:0, 6:0.25, 7:-0.05, 8:1, 9:0.32,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTATTCCCCGTGTATGCGGGGGTGATCC
# Alternate repeat :   TTCCCCGTGTATGCGGGGGTAATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [17-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//