Array 1 77962-75067 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHBQ010000002.1 Cryobacterium roopkundense strain DSM 21065 Ga0104588_02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 77961 29 100.0 32 ............................. TGCCGCCGACATCTTCAACGCCGTGGGCGAGG 77900 29 100.0 32 ............................. GTGGCAGACGGTTGTGTCGGGTGGGACTTCGC 77839 29 100.0 32 ............................. GCACTCGAGTTCGGACCGGACTGGGACGGCAA 77778 29 100.0 32 ............................. CTCGGCGGCTTCTGCGACCTGCTCAGTGGTCA 77717 29 100.0 32 ............................. TCCCCCGGCTGCAACTGGTGGCTTCCCCGACT 77656 29 100.0 32 ............................. TAAATAACGAAGGCCCCCACATCATCGTGGGG 77595 29 100.0 32 ............................. TCATTATCGAATCGACCGGTGCCGTAGGCAAA 77534 29 100.0 32 ............................. GAAGGCACCGTGTCGGTCTCGACAAGGATGCC 77473 29 100.0 32 ............................. TGACAGACCATCCTGAGTCGCACGCAATTCGG 77412 29 100.0 32 ............................. ACCAGATGTCCGGTCATCGCCCAGGCCGATCA 77351 29 100.0 32 ............................. AATGCGGGTGACTGTGTAGGCATCAACGGCGG 77290 29 100.0 32 ............................. GCCGTTGATTTGGCTATCTACGGTGGTCAGGA 77229 29 100.0 32 ............................. GCGACGCGCTCACCTCCACTTGGGATGCTGTA 77168 29 100.0 32 ............................. ATTGCGATGTGCTCATGGATGAAGTGACCGGA 77107 29 100.0 32 ............................. AGTGTGCACGGATTTGGAGATGCCCCGGACAC 77046 29 100.0 32 ............................. GCCGTTGAGATGGTCGCGGGCATGACTCCCGA 76985 29 96.6 32 ............................T TGTCGCGCTTGCCCGCCGACCATTCCTCGAAG 76924 29 100.0 33 ............................. ACCGTCCGCAAGGGTTCGCTCGTGTCGATCACG 76862 29 100.0 32 ............................. GATGGACGCGGGCTGCGTTGCGGGGATCTGCG 76801 29 100.0 32 ............................. AAGTCCGGTTTCGTTCGGGTCGATGACCTCAC 76740 29 100.0 31 ............................. CCGGCGCGGCAATGCACGCCCCGCAATTACG 76680 29 100.0 31 ............................. CCGGCGCGGCAATGCACGCCCCGCAATTACG 76620 29 100.0 32 ............................. TCAAGTACGAACCGCGGGGCCTTCACGCCGAA 76559 29 100.0 32 ............................. AATCACCGCACTGGCCTGATGACGTGTGCGGA 76498 29 100.0 32 ............................. CCGGGCGACGAAACGAGACAGGGTTGACCGGG 76437 29 100.0 32 ............................. CCTGACGTGGTGATATTCGTCGGTTCTCGGAA 76376 29 100.0 32 ............................. CCCGAAGCCGTGGATCACCATTCCCCTGAGCT 76315 29 96.6 33 ............................G GTGACTGGCTGGCCGTCGCTCCCAATCATGAGG 76253 29 100.0 32 ............................. TCAGTACCGAGCTATCCGCCCATTCAGGTAAG 76192 29 100.0 32 ............................. GCCACCTGCAATAGTGGCGCATCCACACCATA 76131 29 100.0 32 ............................. CCACGCGCCGTTCACCCACACGGCTTGGTATC 76070 29 100.0 32 ............................. TCATTCTTCCCTCGTGCCGTCCGGTGCGCTGG 76009 29 100.0 32 ............................. ATAACCCAGTGGGCGGTGAAGGGTGGCCGGCG 75948 29 100.0 32 ............................. GCGGCATGACGGCGAGCATGCGGGTGTGGGGT 75887 29 100.0 32 ............................. GAGTTTTCGAGGGTCAGGGCGAGCCCAGACGC 75826 29 100.0 32 ............................. TCAGGCGCGCCGTGGTCGTGTTCTGGTTCGAT 75765 29 100.0 32 ............................. GTGTACAACGGAGACTCGAATACGGGCGCTTG 75704 29 100.0 32 ............................. TTCAGTTGCACAAGCCCACTGGTGTCGAAGCC 75643 29 100.0 32 ............................. ATGATCATGCTCGCCGGCCGGGTGTCGCAGAC 75582 29 100.0 32 ............................. AATGGATGCCCGGTCCACGGTGGCGGGTTTCA 75521 29 96.6 32 ................A............ CGCTCCATCACCACGGGGCTGTACCTGCCTGA 75460 29 100.0 32 ............................. GATGCCGCCCACGCTGTCGGCATGAGTCTCGA 75399 29 100.0 32 ............................. GTTTGTGTTGTTGCCCTGAGTGTCGATCACCG 75338 29 100.0 32 ............................. AGCAACACGGTGGCTGATGCCGGCTGGTACGA 75277 29 100.0 32 ............................. CCACTATGGCCGGAATGAATTCTGCCAATGTC 75216 29 100.0 32 ............................. GCCCAGGCGGAGGATGACGTGGCTCCGAAGAC 75155 29 100.0 32 ............................. ACAGATGTCCGGTCATCGCACAGGCCGATCAG 75094 28 96.6 0 .....................-....... | ========== ====== ====== ====== ============================= ================================= ================== 48 29 99.7 32 CCCTTCCCCGCGTAGGCGGGGGTGTTCCC # Left flank : GGTGAGGTCAGTGATCACCCAACGACGCACCCTTGAAGACATGTTGACCATGACCATGCGGATACTCTCGCCACATCTCAGCGACATCGACGGCGACGTCTTGCTTGACGACATTGGAACGGTCGCCGGGCACACCAACTACGGGCAGCCGGAGGTGTGATCCGATGTTCGTCACTTTGCGAATCACCGCAGTTCCAGACCATCTCCGCGGATACCTCAGCAGGTTCCTTGTCGAATATGGCACTGGACTTTACGTGGGAAATGTGTCCAGACGAATCGTTGATTCTCTCTGGTCCCGAGTCACGGACGCCGCCGGAGAGGGCGAAATTGTGTTGGTGACAAGTGAAGCAACCAACGAACAAGGTTTCAAAGTCCGTCTCCATCAAGGCCGGGGCAAAGAAGTGGTCGACATGGATGGATTCGAGCTCCTTAGGAGCATTCCAGAAGGAGCATATTACGATTCGGAGCCTTTTCCAGATTAGAATCCCTGGTCAGGAAGT # Right flank : ATTGCAGGGCAGTACGCCGAAGTGGTGTTGGCCCCCTCCCCGCGTAGGCGCCCTGCGAGAAACAGGATCTGAGACCAGCTATGTCACCCTCAATGCTTTCCTTAGTGACGGCTCAAAATGGCACCTCGCTGACTCGTCTGAAGGGTGGGACCGAACTCAGGGTGGTGAGTTTGATGTGACCAATGACGGTATGACAGTCGTAGTCAAGTTTCCGCTCGCACTCACTGCGGGTCTACCTGACAACTTTGAGTGGAGGACCAGTGGCAGTGGTGCGTGCCTTCGTGGTGGCAAAGACTCGAGAAGTGGACGCGGACAGCCTCCTGATATGATCCGGCGATCGTGCAGTTCTAATAGGGGATCCCGTAGTCGCAGCTCGCTATTCCGTACGCAGCGCTCGTTGTGTTTTGCGCGACTGTCGCTCCGTCCACGACGATCTCGCACGTCACGGTGCCGGTGTCGGCCTGGTTCTGGATCATGATGGAAAGGAACTCGCCATTGCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTCCCCGCGTAGGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //