Array 1 482745-489262 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMPG01000002.1 Candidatus Microthrix parvicella Bio17-1 contig_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 482745 36 100.0 37 .................................... ATTCTGTACCGCCTTATCTATTTGTTGAATGAGATAG 482818 36 100.0 38 .................................... AGCACGCCACCATCGTGTCCGGTCCCGACGGGGTCGCG 482892 36 100.0 40 .................................... AGGTAGTTGGCTCTGGTGAGGCCATGGCTCCGGGCTATCT 482968 36 100.0 40 .................................... GGGTTCCGCGCGATCGCTGACCGGTGGGTGTTCGATGGCG 483044 36 100.0 36 .................................... GACCGTCCTGCCGGTTGCTGACGGTACCGACGCCGG 483116 36 100.0 38 .................................... GATACGACACCGATCTTCCAGTCGGCGGTGCAGGCGCG 483190 36 100.0 37 .................................... GGTCGATGGCACCTACATTGCCCGCTGGCCTGATGCC 483263 36 100.0 35 .................................... CAGGTGGCGTCCAAGGCCGGCAACACGAACCGGCA 483334 36 100.0 37 .................................... ACGGTGGCCCGGTCGGTGCTCCGTGATGGCACGATCC 483407 36 100.0 39 .................................... CGCGTCACGCCGGTGACGTCGAACACGACGGTGCCGGAC 483482 36 100.0 39 .................................... GGGTGGGATGCGTTCCCGGAGTCGGCCGGAACGTGGGAG 483557 36 100.0 38 .................................... GCTGGGGTGTTGCTCATTGGGTTGCCTCCTGGCAATTG 483631 36 100.0 36 .................................... GTCTCGATGCTGCTTGCGGCGGTCCGCTTGCTCCAC 483703 36 100.0 37 .................................... CTGATTCACGGTGAGGGTGACCGGTTCGCTCAGCCGT 483776 36 100.0 36 .................................... GAAGTGCCCGAGCTGCTCCACGACCAGTTGGGCAAG 483848 36 100.0 38 .................................... GAGGTGGAGTTGGGTCGACTTGTACCGCTCGCGGAGGA 483922 36 100.0 39 .................................... GACACGATCATCGGCAAGCTCCAGGAGACTCAGGGCGAC 483997 36 100.0 38 .................................... GAGACGGCGAGGAGCCGTGAGGTTTCCTCCGATGTGGT 484071 36 100.0 38 .................................... TGGTTGGATCCGGCCCCGCTGATCGACGAGGCCCGCGA 484145 36 100.0 39 .................................... ATGAGTGCCAGCCGTTGGGCTGGGGGGCCAAACTTGCCT 484220 36 100.0 38 .................................... GGGTCAGCCCTTCGCTGCGGCGACAGCGGAGTTTGCGG 484294 36 100.0 37 .................................... TTCCAGTGCTGCGTTGTCATCAGAACATCAATCTGAA 484367 36 100.0 37 .................................... GAGGTCCGCCCCGAGCGCTGCGCCATGTGCAGGGGTA 484440 36 100.0 38 .................................... AGCGACCTCCAATTGATCCTCCGGGACTAGCTCCCGGA 484514 36 100.0 38 .................................... TGGTCGAGCTAGGCACATCGCCTGTAGGGACTGGGCGG 484588 36 100.0 37 .................................... TCTCTGGTGATCAGCATGGATCACACCAACACTGGGA 484661 36 100.0 38 .................................... AGTGCCTGGTCGACGGGGGACAGCAGGCCGATCACAGG 484735 36 100.0 36 .................................... GTCGAGCAGACGGATGCGGACACATACGATCTGAAC 484807 36 100.0 38 .................................... ATCGCCACGGTCACGTTCGTTGGCTGACCGAAGTCTGA 484881 36 100.0 38 .................................... ACGGTTCGGTTGGCCGCCTTGGGGAACGATGGTTAAGC 484955 36 100.0 38 .................................... ATCTGGGACAACGCCGACCGCGAAGCTCAGCTGCTCCG 485029 36 100.0 38 .................................... GCCGCGACGTCGTCGGTCTCGGCGAGCTGTTCGCGCAG 485103 36 100.0 37 .................................... AGTACTGACGAGATCGAACGCGCTGGCCGCCGGAAGA 485176 36 100.0 37 .................................... GCTGCCGGCGGTGAGTCGGTGGCGGTCGAACTCGGAA 485249 36 100.0 36 .................................... AGCGTCAGCCCCGCCGCCCAGCGCTTCACGTGGCCG 485321 36 100.0 38 .................................... TGGGACTTGATTGACTTGATCTCGGCGCCGCACGCGAG 485395 36 100.0 37 .................................... GGAACGCCGATCGTCATACCGCCGAACGTCGGCCCCG 485468 36 100.0 38 .................................... GTGCCACGCAGGTCGAGGGCGGCACGCAGCGCAGCGGG 485542 36 100.0 37 .................................... TGTGAGACGTGTGGGTCCTCGCCCGTGTAGGGGTGCC 485615 36 100.0 36 .................................... CCAAGGGTCTGGCGGATGCCGCCCAGGTGTCGACGC 485687 36 100.0 39 .................................... GGTCATCGATCGACGATGAGGGGTCAAGGCTGGCCCGGG 485762 36 100.0 37 .................................... ACCGCGAACGGGGCAACCCGTTCGGGTGTTTCCTCGG 485835 36 100.0 37 .................................... GCCGTCGATCCACACGATGCGCTCGTTCACGCTGGTC 485908 36 100.0 39 .................................... CGGATCAACATGCCGACCGGTGTGTCGTCGTGGGCGTGG 485983 36 100.0 39 .................................... GTGGCGGTCGCAGGCTGGCCACTTGAGCCGGATGTCAGT 486058 36 100.0 37 .................................... ACCAACATCGTGGCGGGCAACAACGCCGCCAGCTACC 486131 36 100.0 39 .................................... TGCCCGTTAGTGCGTGCCTCGACGTACTGGCGCCACGTT 486206 36 100.0 36 .................................... TACTGCCCGTTCCAGTCACCGAGGTCGTGGGCCGAG 486278 36 100.0 39 .................................... AGCCACGATGTCGCATGGGCGACGAACTTGGGGTCGCTC 486353 36 100.0 38 .................................... TGCCCCGTCCGCACGTTCGCGATCGTCCTGCGCAGGTA 486427 36 100.0 37 .................................... CCGGGGGTCGGGATCGTCGCGCCAGATAGCTGCGTAA 486500 36 100.0 37 .................................... ACCGAGTCGACGGCGTACCGCCATCACAGTGGGTGCA 486573 36 100.0 37 .................................... CTCCTCATCGGTCAATCATCATCATCGTGACTCATGG 486646 36 100.0 38 .................................... AGGGCGATCGAGACCGTTGCGGTCATCCCTGCGTCCCC 486720 36 100.0 38 .................................... ACGTTGGGGAACGTGACTGCACCCGGCGAGGGCGAGAC 486794 36 100.0 38 .................................... GTGGCGCGTAGGTCGAGGGCCGCACGGAGCGCGGCGGG 486868 36 100.0 37 .................................... TCGACGAGGGGGGTCAGCGTGTCGATCAGGTCGGCGA 486941 36 100.0 38 .................................... CCCTGGATGTTCAGCAACACGTCGGCGACGTCGCCCGC 487015 36 97.2 39 .......A............................ ACCCCGTCGACGTCCGGCGTAGCGTCGCACGGTACCCCG A [487035] 487091 36 100.0 36 .................................... TCGTCCGCCTTGTGGACAGAATGACAGTGTTCAGAG 487163 36 100.0 36 .................................... GCCACTCGCAACGCCTGGCGCACAACGGCCGCCTAC 487235 36 100.0 41 .................................... GGGCAGGTTGCGTTGCCGGTGATAAAGGCGCTGGCCACGGC 487312 36 100.0 37 .................................... GTCTTGGCCATGGCGCTGTTGAGCGCCTGCGCCTCAA 487385 36 100.0 37 .................................... GCTGATTCGTCGTATGCGGATGCGTCGGCGCACGGTG 487458 36 100.0 37 .................................... TCGGTCGACGGGAACGACTTGCCCTGGTGAACAGCAA 487531 36 100.0 37 .................................... GACGAGTCCGACCGGACACAGAAGGGTTGGCTTGATC 487604 36 100.0 38 .................................... TCCGAGGGCGCAGGCACCGCGCTCGCCACCGCATCCTA 487678 36 100.0 37 .................................... CGAAGGTCCGGAGGGCGACACGACGTCGCTGGGTGAA 487751 36 97.2 38 ..................T................. TGGTAGTCCCGCTCGGCCTGCTTACACGCCTCGTCGAG 487825 36 100.0 37 .................................... GGCGACTGGGTGCTCTCACAGTTGGCGATCGGGTTCG 487898 36 100.0 37 .................................... CACCCGACGGGAGGTCTAGCAGTGATGAGCCAGTGGC 487971 36 100.0 36 .................................... TCTTGCTCCGCGTGTCGTGACGACGGTTCCGGTGAG 488043 36 100.0 39 .................................... ACCGGTTACGGAACGGTGTTTCTCGCCCGCATCCTCGGA 488118 36 100.0 38 .................................... GCGTAGTGCAGCTAGGGCCACGCCGTAGGGTAGGCCAA 488192 36 97.2 39 ...A................................ GTGTCGTCGCGGTAGTCGTCGAGAAGCTTCTCGACCTTG 488267 36 100.0 38 .................................... CACGATGATGGGATCACGACTGTGCACACGTGCCCCCG 488341 36 100.0 37 .................................... TGGGTGACGCGGCTGATGGTGACGGTCAGGTAGCTCG 488414 36 100.0 37 .................................... CATCGGCACGTCGACCCCGTCAGGCCACGCCCTGAGT 488487 36 97.2 37 ...........A........................ GCGGGGTCTTTGATCAGCCACGGCAGCTCGGCCCTGA 488560 36 100.0 40 .................................... GAGGATCCGGCCGGCGCGATGAAGGTCCTCGAAGCGTCGT 488636 36 100.0 36 .................................... GGGGCGTCGGGGGTCACTGTGCCAGTGGTGGACGGA 488708 36 100.0 38 .................................... CACAGCCACTGTGCAGCGGTGGCGATCCCGGTGGCCAC 488782 36 100.0 39 .................................... CCCATAGTGCGAGAACGCACCGCACGTTTCCGGCGCCAC 488857 36 100.0 38 .................................... GAGCTCGAGCGGCTCTCGTTCGATAGGTGGGGATCGAA 488931 36 100.0 37 .................................... AACCGGGCGGCGAAGGTCCGCAGCAACACGTTGCGTG 489004 36 100.0 37 .................................... CATCCCCACACACCCCGAAGGAAACACGACCATGACA 489077 36 100.0 39 .................................... GCTTGGCTGGTGTTGTGCACGGTTGTGCTCGTCACAGGT 489152 36 100.0 39 .................................... TAGCCGCCGGTGTCAGCCGCGCGTGTCTTGTACCCCCAG 489227 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 89 36 99.9 38 CTTCCCCCGGCCATCAGGCCGGGGCTCCATTGCGGC # Left flank : GAGCGGTACGAACCGTTCGTCACCAGGTGACGGTGCCATGGCTCGGCGCAGATTCGTGGTCTGTTACGACATCGCCTCGCCAGCGCGGTGGAGGCAGGTGTATCGGATCATGCAAGGCCATGGCGAATGGATCCAGCTCTCCGTCTTCTTGTGCGACTTGGACGACGTGGAACGAATCCGACTTGAGAGTCTGCTGGCTGAGGTGATCCACCACCGGGATGATTCCGTATGCTTTGCCGACCTTGGCCAAGTCGAGAAGGATGCAGTGAAGGTAGTCTTCATGGGCAAATCACGAAGACTGCCAAATCCCGGGCCGGCGATCTTCTAAGCGAGCGCTCGGGTGATGGACATTCCCCCGGGCAGCGCTCGAAACCCTTGAGCCACCGGGAGGTTTGGTTGGTCTTTGACAACAGCATCAGGATGCGATGACCCACCGTCGTTGGGACCGCTCGAAATCGCCCGAAAGATACCTGCTCTCCCAAGGGCTCCCATCAGGGGCC # Right flank : CCGCTGGACAGCCCCGTGGCGGTGCAGTTCCTGCACCGTTGGTTGGCGGTGGTCGTTGTCGTCGGCGCGTTGGTAGAGGCAGCCAGGTTGTACCGGGCGGGGGCACGGCCCCACGCGTTGGCGCTCAAGGTCGCCGTGGTGGCGCAGTTCCTACTCGGCGTATTCACGTTGGTGTACGCGGTGCCCGTCGCGTTGGGCTTCGCCCACCAGGCGGGGGCGGTAGTGCTCCTGGTCGTCACCGTCGTGGCCGCGCACTGGTCGATGGGTGGCGCCCGCGGCACTGCCGGGCAGCGTCGGGAGGCTGCTCGCTAATCCGTTCCGTGGCACCGCGGCGCCGTTCTCTTCACGGTGAGTAGCGGCACGAACGCGCTCCGAAGTACTTTCAGAAATAGGTTGACGACGGCCTGCTTTTCCGTCATACTCGAACACATGTACGACTTGGAGATCCCGGGCGAACCAACCCCGATCGACCCAACTTCAACCGGAGGCCCATCCGCCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCCCCGGCCATCAGGCCGGGGCTCCATTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-16.30,-16.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //