Array 1 193364-193217 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKPK010000003.1 Bilophila wadsworthia isolate MGYG-HGUT-01359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 193363 28 100.0 32 ............................ TCGGCGACATGCTCGGAGACTCCCGCGCTTTT 193303 28 100.0 31 ............................ AACCGGAGCGACAGCGCGTTCCCGTCACCGG 193244 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 GTTATCCGCCGTGTAGGCGGCTTAGAAG # Left flank : GTACTCATTCACTTCTCCTAGCTCTTTTGGTTGGGGTCATATTTTCTCCACGAAGTAGCCGGATGGTGAAGTCCGCATGGGCCGCATCAAAGCATGTGTATGGTGATGACAGTCTTTCGCGCCACTGGTCGCGCTCTTCTTTTGTTGGGTTCATATCATTTTTATCCCTTTAGTGCCTTGTAAATACGGACGACAACTTCTTGCAGTTCTGTTTTTTCATTCTGGGCATGTTCCAGTTCCCGGCACAGCCTGAAAATGGTAGCCGCTGACCCCATCTCGTCGAGCGCCTTGGAGTCTCCGAGCATGTCGCCAATGGCGGCGGTTCGGATGTAGTCGAGTTCTTCGGGGGTGATCATATCTTTCCTTTGGCTTCATAAAAAAGTTGTCTAAAAAAGAGATTGAGAATAAGGTAGTTACAAATAGAGAGGAAAAGCGAAGTTTCTGAAGTCTTTTCAGGTGTAACCTACTGAAAAGCAGAGATACTTTTGTAAAAGCCTCTA # Right flank : TATCTGGTCGGACGCCTAGCCACTTCATCGGCATCACCCCCTTCCAGGACCAATTGCCCACAACACCCAAAGAAAAAAGGCGACCCACATCAAAGTGAGCCGCCTTTCGTTTGGGGTCATTCGTCGCCTTCGTATGGTGTTACATCCAGCACGTTGTAGGCGTACCTGTGCCGTCGGGATGGTTTGCCCCCTTCCGTGATGGGGAGCACGCGCAGGTCGTAGTAGGGGTAGGAGGGGGTGAAGAGGATTTTATCGACCTTTGCCGGACTGGTGCCGTCGCGGTCCCATCCGGATACGAGGTCGCCTTCCTTGTAGGGGCAGGCGGCGACGGCGGCGTCACGTTTGGCGATTTCAAGAGCGTTCTTCGCCTGTTGCACGGCGCGTTCGCACCTTCTGACCTCATCAACGAGTTCCATGATTTCAGCGTCGTTCATTACCGTTCCGTGTGATGCGTGTTGAGGTTATGGGTTCATCTTTTGCCTGAGCTGGTCGGCAAGCTC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCCGTGTAGGCGGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTATCCGCCGTGTAGGCGGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 330640-331207 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKPK010000002.1 Bilophila wadsworthia isolate MGYG-HGUT-01359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 330640 28 100.0 32 ............................ ATCAGGAGGGAGCGCACGAAAGTGCGGCTTCC 330700 28 100.0 32 ............................ CTGCGCAGCACGGACACGCAGGTCAAGGCGAG 330760 28 100.0 32 ............................ CTTTGCTGATCATCTGTCCGAGAGCAATAAAG 330820 28 100.0 32 ............................ CGAACGGGCCGCCCAAGAAGCCGCCCGTATAT 330880 28 100.0 32 ............................ TACGGCACCCCTCAGGTCGGCACCCCACAGGT 330940 28 100.0 32 ............................ TGAGAGATGATGTCCCGATCCATGTAGACGGC 331000 28 100.0 32 ............................ TTTTTGCGGGGGCTATCGTTGGGATGGTCGGA 331060 28 100.0 32 ............................ ACCACGCCCGCGGACGACGCGGCCATTTTGTA 331120 28 100.0 32 ............................ GTCGTGAGCGCGGTCTGGATCGCCTCCGCAAC 331180 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTATCCGCCGAGTAGGCGGTTTAGAAG # Left flank : ACGCTGGGCCAAACGTTTGTATGCGGATCTGGCGCGAGGACATGGATTTTCATTCGTTCGCGAAGAAGGCGCGCGACGTTCAACCTCAAAAGCGGATGTCTGCAACGGCTTTCTGGATCATGGCAACTATATCGCGTATGGGTATGCCGCTGTGGCGCTTTGTGGTCTTGGGATCAGTTTCGCCATGCCCATCCTGCACGGGAAGACGCGAAGAGGCGCGCTGGTATTTGACCTCGCGGATGTGGTCAAGGATGGTTACGTCATGCCGCTGGCCTTCGAGTGTGCCAAAGAAGGAGAGACACAAAAAGATTTCCGGCAACGCCTTATCGAGCACTGCCAAGAGGAAGATGTTTTGGACTTTCTTTTTGACTTCATGAAAAACCTGTGTGTAAAAAACACATGATATAAACGTGTTACATCTAGCTCACCAAAACGAAACCTTCAGAAGGATTTGAAATACAATCTGCTGAAAAATAAGTATATTGTTTTCAAAAACTCTA # Right flank : GTCACGGTTGGGGCTTTTTTGCGCCTGCCCTTGACATAGTCTCGTTTATATGGCGAGAGAGGAGGAGGGCATGGCCCTGGCGCGTGGTGGATGGGCTGTTCTTCTGGCAGAGGGAACACTGCAAGAGCAGTTACGAGAGCGAGAGGGAAGGCAGGCAGTCGCCGCCGGAGTTAAGAGAGAAAAAGGCTATTCTATGAATAATAAGCAAGGATTGCCCTATTCCATCCCATACAGTATCCTCCTTCCCCAAAAAGGAGAGAGGTCATGCCACTACCTATGCCAGAGGAAGAGGAAAAGTTTCGCTGTCCACACGGTGAACGTAATCAGGCGTTGATGCTCTGCTCGCTTGATTGTGATTTGTCCGGTGCTCATCCCGATAGAAAGGCGAAAGCGGATGGTCGGTTTATCATCACGTCGTGGTGGTGCCTGCACAAGTGCAGGTGGCTCCCGGAACATCGAGACGAGGTTCGATTTGTGGCAAAGAAGTCGGACTGAAGAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCCGAGTAGGCGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTATCCGCCGAGTAGGCGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 402001-402273 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKPK010000002.1 Bilophila wadsworthia isolate MGYG-HGUT-01359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 402001 28 100.0 34 ............................ TCCCGAGGGCTATGAGGAAGAACCTTACGTTCTG 402063 28 100.0 33 ............................ TGGGGTGGTTTTCTCGCATTCCTCGCAGAAAGG 402124 28 100.0 33 ............................ TCATTACCCAGCTCTGCAACTTTTTCGATACCT 402185 28 96.4 33 ..............C............. CGAACTTGCAAAGCTGCTCGGCTATAAAGATGA 402246 28 92.9 0 ...........A............C... | ========== ====== ====== ====== ============================ ================================== ================== 5 28 97.9 34 GTCTTCCCCACGCATGTGGGGGTGTTTC # Left flank : CTTGCTGAGAAAGTCTTCACGCTTGTAACCAAGAGCGCGGGCAATTTCAGAGGACTTGAACCAAGGCTGATTGTCACGGGTGACGGGGGAGAAAGTGAAATCGTTGAAGCAAAGAAAAGTGGTCATGATGCCTCCGTTGGAACTTTTCAAGGTTCACAAGGCATTTTCCACAATAGAAAATGCCGGGTGTTGAAAACAGCCAACGGAGCTGCTCCCCGCCTTTGGGCCAAAGCCTTGGACATATCGGGGACACCCGGCATCAATGGATGCAATTATAGCCCAAAACACAGCCAAGAGAACTCTTGACTTTGGGAAAAGGGCACAAAAAAGCGCCAAGCTGTCGAGTGGCGTCGTCCGCCGTTGGGTGTTTTCAAGCACCGTGGAAAAGACAACGCCACAAATTTTCGAAAATGTCAAGACTTTTGCGGAGATATTCTCGATATAGAAAGAGCTATCTAGACAGCTTTCTTTACAGCGAGTATCCTCAATAAATCTACAGG # Right flank : CTGTCGATCCTTCTAAAAAATCCCCCCTGATATATTCAGGGAGGATTTTTTTACAACGAACCTGTTTCCTCAGCTGCTTTTTCTTTCATATACTCGTTCATCTTTTCGTAAAAATAGAAAAGATGAACTGCATTTTCCGTGCTCATACCTTTCTGTTTTGCATGAGCAGACAATCCTATAATAATTATATGGTCTTTGTCGTTCTGTACTTTCCAACGAGCACGCAACGCGCGTTCATCTTTCGCCAGAGCTATTGACCATTCAGTCGTTTTTTTCCAGATACTATCCGGTTTTATATCATCAAAAACGTACTCAGGTTCACCGTATTTTGATTCAAGCTGTTTTTGTATCTTTGAAAAAAGAGCTCGTGTCTTCTCTCCAGCAGAGTCATTATCTATCGTTTTTGATAGAGCCTGAATTTTTACTAAACCGTATTTTTCTGGAATGGTGAGTAAGAATGTATCAAAATCGGGATGTGATTTTGGTAAAGAGTAAACGAC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCATGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-11.70,-11.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 430876-430249 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKPK010000002.1 Bilophila wadsworthia isolate MGYG-HGUT-01359, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 430875 28 100.0 32 ............................ TTCCGGCACAAGCGCAAGGTGGTTCGCCCGGA 430815 28 100.0 32 ............................ TTGAGCAGCAACGGAGGGACATTCTGACGGAA 430755 28 100.0 32 ............................ TTACGCCTGACACGGCCCGCCCCCGGGCAAAG 430695 28 100.0 32 ............................ TGATAGGGCTGATTCCCTCGCGCTCACTTTTT 430635 28 100.0 32 ............................ TCCAGCGTCACGGTACCGCAACGGGGCCATTG 430575 28 100.0 32 ............................ ATAGGGAGGGCTTCACCGAATCGCTCATACGC 430515 28 100.0 32 ............................ ACCTGCGCCGAACCTTCCCCGAACTGCTGGAT 430455 28 100.0 32 ............................ CACCTGAGCAGCGCGGCGAGCAGTTCAGCCCC 430395 28 100.0 32 ............................ TCAAAAGCACAGACGATTTCCGTGGGCAGGAT 430335 28 100.0 32 ............................ TGCACGGAACCGAAAACCGGATGGATCAATTC 430275 27 89.3 0 ......................-...GT | ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.0 32 GTTATCCGCCGCGTAGGCGGTTTAGAAG # Left flank : CCCCACGGAAGGCTCACAGGCTGGACGCCACGGGACAGCAGGATTGCCCGCGCCCTCTCCTCGCCGATGTTCATGACGGAAGCGGCCTGTTTCGTCGTCAGGAGTTCCGGTTCCATGCTATGCTCCTATACCGCCTTGCGGGAGGCTTTTCCTCTTTGGGCTATGGCTTCCAATCTGCCGATGATGAAACGGATTAACACGCTGTTTTCGTTGCGCTCTTTGCGGAGCTTCTTGATCTCCACACACAATCTGAAAATGACGGCGGACGGCCCCATCCCATCAAAAGCGCGGGAGTCTCCGAGCATGTCGCCGATGGCGGCGGTTCGGATGTAGTCGAGTTCTTCGGGGGTGATCATATCTTTCCTTTGGCTTCATAAAAAAGTTGTCGAAAAAAAGGATTGAGAATAAGGTGGTTAAAGATAGAGATTAAAAGCGAAGTCCGTGAAGCTTTTTCGAATGTAACTTACTGAAACGTAGGGATACTTTTGCAAAAGGTTCTA # Right flank : TTTAGATGCCGGGTATGAAGCCCCCGGCGAGGCTTTTATGGTGACGCCCCGGAAGGAAGGTGCGGAGCGGTTTGGGGGCTACTCGGCCCACGCCGGGCATCCGGCGCGCTGTTCGCAGTCGGAGCACGTCCAGTCGCTCACCTGCGTTTCGGTTTTCGGACAGGTGATCATGTTGGCGGCGGGGGCGGGTTGCGCTTCCGGCTGCGCGGGTACTTCCGGGGCGTCCTGTTGCGCTCCGTTCCGCATGGCTTCGGCGGCAAGTTGCTTGGCCTTTTCGCACTGCGCCGTGGTCCAGTTGCGGGCGTAGGCGTTCACCAGTTTTTCGACGTCCTCAATCGGGTTGCCCGTGGCCAGCCATGCGTCCGCGGCTTCTTTGCGTCGGGCTTCCATTTCGGCGTTGGTGGGGCGGCTACGCTTGGACGGGGTATCCCTGTCCTGCGCTTCTTCCTTCATTTCCTGCACGGATACGCGATATGTCCCGTCTTCGGCGGGTTCGAGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCCGCCGCGTAGGCGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTATCCGCCGCGTAGGCGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //