Array 1 103343-104601 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQVS01000008.1 Buchananella hordeovulneris strain DSM 20732 Scaffold8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 103343 37 100.0 33 ..................................... ACTGCCGTACTGACTATAAGCGCCACCACTAGC 103413 37 100.0 34 ..................................... TCTTCCGTCGGGGTTTTCAAACCCCAGCGATACG 103484 37 100.0 34 ..................................... ATCACAAGGGCAGCCGTGTATCGCGGCCACCCTC 103555 37 100.0 36 ..................................... TCGCTGACAAAGAACCGGAAGCCAGCGGCTTCCGGT 103628 37 97.3 34 ..A.................................. ACTTCCGGCCGGCGGACCACGTGCCCCTACGGGG 103699 37 100.0 35 ..................................... GCGCCGTGAGCACCCGGTTGCGGCCGAATGCCCGG 103771 37 100.0 36 ..................................... ATGAACACCACCCCCTCAGTCGGCTCGGGCAGGCCC 103844 37 100.0 34 ..................................... ATAGTCGGACTCGGCGTCGGGTCCGGGGCTGGGG 103915 37 100.0 33 ..................................... GTGGGTCAGGGTTTCCCCTGGCCCTCCACGAGG 103985 37 100.0 36 ..................................... GTGCCGTCGGGCGCCGCCAAGGCTACGGGTTCACCG 104058 37 100.0 37 ..................................... GCCTGGAGGGCGGCGCGGTGGTCGGCGTCCGTGTAGG 104132 37 100.0 36 ..................................... CCGCGCTGACTACCCTCCTTCTGAACCTCCTTCAGA 104205 37 100.0 34 ..................................... ATACTGCCCGACGCAGTATGTACGGTGTAGCGAT 104276 37 100.0 36 ..................................... GGGTGATGGGCAGCCTCTCTCCTAGGACGATGTCAC 104349 37 100.0 35 ..................................... GGTGGCTCCGTGGCGTGCTCGGCGTCTCGGTAGCG 104421 37 100.0 34 ..................................... CGGTCCTGGCCAGCGAGAGACTCGTAATTCTCCC 104492 37 89.2 36 ...................T........A....G..T TTGGAGTTGGTGACCAGGCTGGGCTGAGAGTCGGAA 104565 37 70.3 0 T.T.G...A.C..........T....G.TTC..C... | ========== ====== ====== ====== ===================================== ===================================== ================== 18 37 97.6 35 GCCAACAAGCACCTCGCGACTAAAGGTGCATTAAGAC # Left flank : GGCGCGAAAATCCGCGAGTTAACTCGCGTATCCTGAAACAGATGCACCAAAGTGCTGGAATCGCGTAAGTTTGCTTCAGCAGCAACTTTGTTGCTGAAGCAGTCGGGGCGCTACCTGGCTGCTATGCCTAGGTCCAGCATAGGGGTAGGAGGGCGTTTGTGGTACTTGCTCCAGGCCGCAAGTGTGGCGCATGTCACTGTGGATGGGTTTTTTGTTGGTGTATCAACGAAAAGTCTAGGTGTGTGACTGTTGCTCCGCGCATATGTCAGGGCAATCGTGTGCATGCAAAGGGTGCTGTATGTAGGGCAGAAGAAGGGGGGAGTGGTGTGGACTGCTGTCAACAGCGCGAACTGCTGTTATTGTTCAGGTTATTGTCAGGATCAAGTTTGGGTGCGTGAACGTGACGAAAATCAGCGCACATCGTTCAGCTAAGTGCTAGCATGGGGGCGTTGGCGCGGTCCAGGCCGAGACGGCGGCCCTCAGCTGACTCTCAGCGCAGG # Right flank : CCTGAGCTTCAAGGTTTCGTCTGGTCGGCCACCGGGCTGCCGCACCCAAGCCCGGCCACCGGGCCGCTGCACCTAGTACCGCGCCACCGCATCCCGCGCCGCCCGCCCCTACCCTTCCCCGTCGTGCACTCCCGGGGCGAGTGCGGCCCGGGCGGCGGCCGGGTTGGCGCGCCGCAGCCGTCGCAGGTAGCGCTGATACCACAGCGCCGCCGAGCCGACGAAGAGCACGAGCCCGCCAATGTTGTATGTCAAGGTCAGCCACAGCGGCTGGGCCAGCGGAATCGTCCCGGCGACGAACACGACGCAGCACCCGGCGAGCAGGGGCCCGATGACGGCGAGCGCCGCCCGGCGGGGCAGGAAGCGGAAGTTGCGGGGGACGGCGTCGTACTTCCACCGCAAAACCAGGTAGGCGTACATGATGATGAGGCTCGGCAGCAGCGCCGTCACCGCCGTCATGTTCACGACGATTCGCAGCAGTTCGTTGATGTTGCCGCTGCCGA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCAACAAGCACCTCGCGACTAAAGGTGCATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 34855-41890 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQVS01000009.1 Buchananella hordeovulneris strain DSM 20732 Scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 34855 29 100.0 33 ............................. GTGTACTTCCCCGTGTAGTTGTACTTGTGAGTT 34917 29 100.0 33 ............................. GTCCCCTACTCTATCCTACTTAGGGCAGCGTAT 34979 29 100.0 33 ............................. TAGCCAGGACATTGGCGTTCAGACCTTTTAGCT 35041 29 100.0 33 ............................. CCCCATTGAAAGGACCGAAACCAAATGGAAAAC 35103 29 100.0 33 ............................. TGGAAGACAGCGTTGCTTCAAATTTGAACTACT 35165 29 100.0 33 ............................. GGGAGGTCGCAAAAAGCCAAACTCCCACGAACC 35227 29 100.0 33 ............................. TGCGTCATTCGCTATACCAAAGAGATATATTTT 35289 29 100.0 33 ............................. TATCCTTGGTGTGCCTCCATGCACCCGGTTTCC 35351 29 100.0 33 ............................. CCGGCCCGAGGGCCCGGCCGGGATTTTCCTCGA 35413 29 100.0 33 ............................. GTCCGGCGCCCAAAACTTGTCGATCCACCACCC 35475 29 100.0 33 ............................. GTGGGAGCGCCTGGCGAAATCCAACGCCGAAAA 35537 29 100.0 33 ............................. TTCATGAGTTCACTCATTGCTGTTTCCTTTCAT 35599 29 100.0 33 ............................. ACATGGTAAGCCTATCGATATAGGCTTTCAGTT 35661 29 100.0 33 ............................. TACCCCCGCTGGGCGTGCCGCCAATCCCGCTGC 35723 29 100.0 33 ............................. GTTTCAGCGGTGGCTCACCCACGAGGTGCTGCC 35785 29 100.0 33 ............................. TCCGGGGAACAGCTGTTCCATGTTCTTTAGGCC 35847 29 100.0 33 ............................. TAGCAGATGACTATCTCCGGCTGCCGTCGGAGA 35909 29 100.0 33 ............................. TCAAGCTCCTACAAACTCGCATCCGGACCGCCG 35971 29 100.0 33 ............................. CCCGAGGGGCCATCCAACGAAACCTCATCGAAC 36033 29 100.0 33 ............................. GGCCTGGACGACTAATGCCCCGGGGCCCCGCAC 36095 29 100.0 33 ............................. GGCCGCCGTTGAGGCCGCCACCCAGACGGGTGA 36157 29 100.0 33 ............................. GCTCGTAGAGGTCATATCGACGGTGGTTATACC 36219 29 100.0 33 ............................. TTCGCTGTGTAATACCTGAGAACGCGGCCCCGG 36281 29 100.0 33 ............................. TGCTTAATCACAATGTCCGAGACGGGCGCGGAA 36343 29 100.0 33 ............................. GGTTAGCTGGGAATAACCTGAAAGCCTTCGGGC 36405 29 100.0 33 ............................. CACCAAAGACGTAGACTTTAATATCGTTCTTGC 36467 29 100.0 33 ............................. GAACGGGAATGACATGTATGCTGTACCTAAACT 36529 29 100.0 33 ............................. GGCCGATAGCTCAGCGCCAGTGATGACCCCGTG 36591 29 100.0 33 ............................. CAAGGATGGACCTAAAGTGAAGATCAATTTGGA 36653 29 100.0 33 ............................. TGCCTGCGAGACGGGCCAGGGCGGGGATGGAGT 36715 29 100.0 33 ............................. TCCTAACGCTAATGAGTTTGGGTTAACGTATTT 36777 29 100.0 33 ............................. CACGTTAGCTTCGATCGGGATGATGATCTCCCG 36839 29 100.0 33 ............................. GGCTCCCCCTGCCGGACGTTTTTGAGCGCCTGC 36901 29 100.0 33 ............................. CAGCCACCCCCACCAAGACCGCACCCGTGGGAT 36963 29 100.0 33 ............................. CGTACACTAGCTTGGTGGCGACGATGCCACAGT 37025 29 100.0 33 ............................. CACTAACAGCATCCCCGGCCGCTTGTCAAGCGA 37087 29 100.0 33 ............................. GGGCAGCGCGGGATATATCATTTCTTCAACCAC 37149 29 100.0 33 ............................. CCGCTTGCGGCCCCACATGAGTTTGGATTATCG 37211 29 100.0 33 ............................. GGCGGGCAGGGACTCGGCAAGCCATAGCGTTTC 37273 29 100.0 33 ............................. GGCTGTGACGCCACGGTTCCCAGCCCCAAGGGG 37335 29 100.0 33 ............................. GCCCTGGATGTACGCCGTCCTAAACGTCTCTTA 37397 29 100.0 33 ............................. TTGCCATTGACGCGGAAATCATATCCCGGGAAC 37459 29 100.0 33 ............................. GGTGGGGACGGCGGCCATAGCAGGGCTCGTGGC 37521 29 100.0 33 ............................. GCCTCAGTCAGTCGCTGTCCTGAGGGGTCCGGG 37583 29 100.0 33 ............................. GCCAACCCCATCGACGGCGAACCCGACTCCCTC 37645 29 100.0 33 ............................. CGCGCCGCGGCCGCCCCAGTTAACTTCGTTATA 37707 29 100.0 33 ............................. CGTCCCCGGCCTGCCCGCCGCCGCCCCGCAGGG 37769 29 100.0 33 ............................. GCGGTCGGCCCGTTTCCGGGCCTTCGTGGACGG 37831 29 100.0 33 ............................. CAACCTGCCCCCATACGTGACCGTCAACTACAT 37893 29 100.0 33 ............................. CCAGGCGGTGGGGGCGTCGGTGCCGAACCAGGC 37955 29 100.0 33 ............................. GCAACCCTGCTACCCGAGGCAATGTTCGTCCAA 38017 29 100.0 33 ............................. GAGTACTTCTGCGGGGTGTGGGATTCCGAAGCA 38079 29 100.0 33 ............................. GCGCGCGGGTAGCGAGCTGTAGCACCCCAGGTC 38141 29 100.0 33 ............................. CGTCGCCGCCCTGATCCCCGCACCCCCCGCCCA 38203 29 100.0 33 ............................. CTCTCCGCCCTCGCTGGCCGCCGTCAGGCGGCG 38265 29 100.0 33 ............................. GTGAATCCCTCGTCGTCATCCCGGATCAGCGTG 38327 29 100.0 33 ............................. GGATTGGAGCGCCAGAAAAGCTTGGCAACGCAA 38389 29 100.0 33 ............................. CACCGATAGCCTGCTGCGGGCGGCCCGGCGCGA 38451 29 100.0 33 ............................. GATGCTGCGTATCCCGTTTATGAAGTCATTGAA 38513 29 100.0 33 ............................. TCCTTCGGTCAGGTTGAACACCTCGCTGTCCTG 38575 29 100.0 33 ............................. GTCGAGGGAGGGCAAGTGGGACCGTAACTCGAT 38637 29 100.0 33 ............................. CAGCCATGTTTGTTAAGGTCGATACCATTAAGG 38699 29 100.0 33 ............................. AAGGCCGTTAACTTCGCGAATAAATGCCCCATC 38761 29 100.0 33 ............................. GAGCTGTTCCATGTCGTCCTTGTGCTGTTCGGG 38823 29 100.0 33 ............................. TATCAAGCGTATAATCGTCCCCATCTACCGGAT 38885 29 100.0 33 ............................. GTGCGGCATGGCTAGGCCCGGCCCTCCGCCTCA 38947 29 100.0 33 ............................. TCCGCCGGTCGCACCGCCTCCAATGTCCTGGCC 39009 29 100.0 33 ............................. GCTGCGGGTGGTTGATGGGCAGGGCCCAGGTCG 39071 29 96.6 33 ............G................ GTTCGCCTTGCGCAGGCTCTGGCTCCGGCACAG 39133 29 100.0 33 ............................. TCACTTCTCGCATAGTATAATGCGAGAAGTATC 39195 29 100.0 33 ............................. CGACGCTGCGCCGATGGAGATCAGCGAGAGAAA 39257 29 100.0 33 ............................. ATCCCGCTTGACGTTTCGGCTGAGGCGGGGAAT 39319 29 100.0 33 ............................. CGGCAGGTCGCGGAAGTCCAGCTGGATGTCGGG 39381 29 100.0 33 ............................. CCGTCCGCTGGTGGACCGCGTGGCAGTCACGCC 39443 29 100.0 33 ............................. GTCCCTGTCATTCATCCGCAGGAAGGCGACCAG 39505 29 100.0 33 ............................. TCTCCCGGCGGGCGGTCAGTGCTTCGGCTTCGG 39567 29 100.0 33 ............................. CTAGACGCTTGACGTAGGCCAGTAGGTCTAGGT 39629 29 100.0 33 ............................. CAATTTCCCGCTGAATAGCCTCATCCCGTGTAG 39691 29 100.0 33 ............................. GACGCGGTACGGGGCGACGAGGGCGCGCTGGAA 39753 29 100.0 33 ............................. CCCGCTGGGCCTGGTCCCCCTGAAGATCGGCGG 39815 29 100.0 33 ............................. GGGCGAGCTGGACGACCCCCACGCCCTACACGT 39877 29 100.0 33 ............................. GAAGAAGCCCGGATCGTTTAACGTGTATGCCTC 39939 29 100.0 33 ............................. GGTCTCCCAGCACGGCGTTGGCGATTGCTTCGA 40001 29 100.0 33 ............................. CCGTGGCTGCGCGACATCCTGTCCGTCTCTTAC 40063 29 100.0 33 ............................. GGCCTACGCGCCCGACGAGCCGTGGGCCTTGAA 40125 29 100.0 33 ............................. GTTAACCAGACTCACCCGCACCCGCTGCAGCTT 40187 29 100.0 33 ............................. GTGCTTAATCATAATATCGGAAACGAGAGCGGA 40249 29 100.0 33 ............................. CTCCAGAGCCGCTCCCACAGCACGTGGTCCAGA 40311 29 100.0 33 ............................. CGTCGAGGACTTGCAGTCGGCCAGCGCGGTGGT 40373 29 100.0 33 ............................. GGCTGAAGGCCGCGGGGTCGATCCCTGGAGTCA 40435 29 100.0 33 ............................. GGGGCGAGCATCGATCGCTGCGACTCGTCCAGT 40497 29 100.0 33 ............................. TGGCGTCCCAGTCTTCGGGCCGCTCGGTGGTGA 40559 29 100.0 33 ............................. GGCGCGGGCACGGACGACGGCAGGTGAGTGCGC 40621 29 100.0 33 ............................. GGGAAGGGCAGGGGATGGCCCGGCCCAACACGT 40683 29 100.0 33 ............................. CCTTGTCCATTTTCCCCTCCTTTCTGGGGTGTT 40745 29 100.0 33 ............................. GCCAAACTCCCACGAACCCTGAGGGGGACAAAA 40807 29 100.0 33 ............................. ACGCAGTCCGCCCAGCGTCTCCGTGGGAGCTGA 40869 29 100.0 33 ............................. CCGGGTCATCCCTCGGGGCGCGCGATACAGGCG 40931 29 100.0 34 ............................. CGAAACTGCTGGGGATGCTTATGGAGCCGCCCGA 40994 29 100.0 33 ............................. CCCAGAAAACCGACCCCACCCGGTCCCGATATT 41056 29 100.0 33 ............................. CTGGACCCCTACAACCCGGGGGCCTGGCGCTAC 41118 29 100.0 33 ............................. GGGTATCTATTTCCAGGTCGCGACAATGGCCAT 41180 29 100.0 33 ............................. GTGGGAGAAGCTGGCGAAATTCAACGCCGAAAA 41242 29 100.0 33 ............................. CAGGACGGACTGCTCCAGGGCGCGGCCCCACCG 41304 29 100.0 33 ............................. GCTGATCCGCGCCCATGAGCTGGACGTGATGAA 41366 29 100.0 33 ............................. CAGTGCTGTTGGCTACTCGTTCCCAGTTAGCGC 41428 29 100.0 33 ............................. TCCAGCCGGACAGCGGTCGGGAACGGGGTATAT 41490 29 100.0 33 ............................. GTCGCCCGGCTCGGGCTCGTAGTGCCCCAGACT 41552 29 100.0 33 ............................. TGGACCGGGTCGGTGGCCGAGATGGCGCGGTCC 41614 29 100.0 33 ............................. CGGTCGGCCTCCTCACGAGACGCCGGGCGAATC 41676 29 100.0 33 ............................. GGGACGCCACAAGGGCAAGCCCCACAACCCCAA 41738 29 100.0 33 ............................. CCGGGACACGTCCATTGACGAGGTCAAGTCCCG 41800 29 100.0 33 ............................. GTGTCGAACGCCATCAGCGTGCGACCACGACCC 41862 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 114 29 100.0 33 GTCATCTCCGCGCGTAGCGTGGATAATCC # Left flank : TGAACTACGCCGAGGATGCGGCGGGGGAGTGGTGAGCAATGCTGGTGCTGGTGCTAACTGCCGTTCCCAAATCACTGCGGGGCGCCCTGACACGGTGGCTGCTTGAGATAGCGCCGGGAGTATTTGTGGGGTCCGTGTCGGGACGAGTGAGAGACATGCTTTGGGAAATGGTCGCTGAGGAACTAGGTGGCGGACGGGCGCTGCTCGTTCACTCGGCGCCCACGGAGCAAGGCTACGCTTTGAAGTCTTTGGGACACGACTGGGTGCCGGTCGACCTGGACGGGCACCTCGGGGTCCGGCGCCCAGTGACAGGAGGCAACCCGATGGCCACTACCGTCACCGCAAAGAAGGGGTGGAGTAGCGCGAGGCGATTCCGCAGACGGTAGTAGGATAGGCTGCGCCTCAGCGTGACAGTTGCTGCGAACCGTTCTCAGGTAGCGAGTAAAGGAAAACGCAAAACTTGCCGAGCTGAGGTGTTGGCAGTTCGCCGATTTGGAAGT # Right flank : CGAGGGCTGCTGTCGGTAGGGCGATCAGCCTTCGTTGTCCCTGCGTAGCAAGGATGCCTCTCGTGCTGTTTTTACACAAATGCATGCAGCTGTTTTGGCGTTTTGGGGAAGGTATTTTATAGGTCTTGTGTGCTTGCTCCAGAGTTTGCTAACTCGCCCCGCAGCACCTCCCAGAACCGCGGATCTTCCGCAGTAAGAACATCGCGCACGAAATACCACCAGAAGTAGCCGCCAACATACCGGTTCCCAACTATCTCCCGCAGCTTGCTGTCTAGTCCGTGGTAGTAGCGCGCCACTCGCTCCTTCTCGGTGGTGTCGGGTTCCGGCAGCCCGTCCTCGGCCCCTTGGGCGCCGATCTCCCCTATCCCCAACAGTGCCCGGGGGAAGCGCGCCCCGAGTTGGTTAAGCACCTCCCCGAGAGGCTCCGCGTCCGGGTGCTGCGGCGGCACGCAGGCAGTCTCGTACACCGACAAGAACACGTAGTCCGGCTCGAAATCCAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCTCCGCGCGTAGCGTGGATAATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //