Array 1 1411071-1406170 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014504.1 Pedobacter cryoconitis strain PAMC 27485 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1411070 46 93.5 30 ..................T...C...............G....... CAAGTGGGCAATTGGGCTTTTCCGGCAGGA 1410994 46 100.0 30 .............................................. CGGCTGATCTTCCTTCTTGCAACTCGATCC 1410918 46 100.0 30 .............................................. CTGCAAGTTTTCAACAATGGCCACCACCGA 1410842 46 97.8 30 .......................A...................... TAAAAGCAGATACCGTGTTATCCCGTTATC 1410766 46 100.0 30 .............................................. CTTAAAATTCCAGGCCTTATCGGTTTACAT 1410690 46 100.0 30 .............................................. ATATTGTTCGCAATTCATTAAGGATATGCT 1410614 46 100.0 30 .............................................. AAACAAATATGGGTAGAAAAGGGACAGTTG 1410538 46 100.0 30 .............................................. TTTATAATTATTTTATGAACTGGTTCAACG 1410462 46 100.0 30 .............................................. ATAAACGTATAAGAGAACTGCAGGCGCAAT 1410386 46 100.0 30 .............................................. ATTAGAGATAAAGTAAACGAGTATTAAGAG 1410310 46 100.0 30 .............................................. TGTGACGCTCTGATAGTTGCGGTCCCATTA 1410234 46 100.0 30 .............................................. TGTGGATAATTTAAAATAATTTGTTAATGC 1410158 46 100.0 29 .............................................. CGCAATAAACATTGCCACTAAACCCACTA 1410083 46 100.0 30 .............................................. CGCTTGCGATAACTCCGTCTTTAACTGTAA 1410007 46 100.0 30 .............................................. AGGGAAAGCGCAGAGCCTTCAATTCCACCA 1409931 46 100.0 29 .............................................. AAAGCCATTGAGAGGCTGTAACCGCTTTG 1409856 46 100.0 30 .............................................. ATAGGATTCAAAATGTATGTGGATGGCGTT 1409780 46 100.0 30 .............................................. AAATGCAGTAAAACAGAGGTTTCTTGACAA 1409704 46 100.0 30 .............................................. ATTAAGTTCCCTGATAGTACCATAAAAAAC 1409628 46 100.0 30 .............................................. GTAAAGGAGGTGTCAAATGGGGGCTGAAAG 1409552 46 100.0 30 .............................................. GTTAAAGGAGATCATTCTTTCAATACCATG 1409476 46 100.0 30 .............................................. ATAAACGTATAAGAGAACTGCAGGCGCAAT 1409400 46 100.0 30 .............................................. TGCGATTATTTTAGCTGTTGCTGCTCTTGG 1409324 46 100.0 30 .............................................. TATTCATCCGGAATGGCCTTCATGTCACGT 1409248 46 100.0 30 .............................................. TATTGAATTATTTTTCTTAGGAAGAAGTTT 1409172 46 100.0 30 .............................................. CAATGTCAGATTCTGAGAGTACTAATCTTA 1409096 46 100.0 30 .............................................. AAAATGACCAATAATCTAGATTCATTTTTA 1409020 46 100.0 30 .............................................. TACGGAGCGTAAGTTTATCGACTATTACGT 1408944 46 100.0 30 .............................................. TCCTAGTATTAAGCAATTCGCTGATTCTTT 1408868 46 100.0 30 .............................................. CGTTGTCATGAAAAAAGAATTGCGGGCGCG 1408792 46 100.0 30 .............................................. CATGATGACCTTTCATTTTCATCAGAACAT 1408716 46 100.0 30 .............................................. CCCAGATATGGTAATAACCTTCAATCCGTG 1408640 46 100.0 30 .............................................. TTAGAAAAAGCAATGCGCGACTATCCTGCA 1408564 46 100.0 30 .............................................. TTTACTAATACTATCAATTTGACTTTTCGT 1408488 46 100.0 30 .............................................. ATGTTAGCGTAGCTGCAAAGGCAATGATAT 1408412 46 100.0 29 .............................................. TATTTCAACCAGTTCCAAAACTCGAATGA 1408337 46 100.0 30 .............................................. ACAACACACAAATGCAAGTTTAATGGTATA 1408261 46 100.0 30 .............................................. TTTCTAAGTATCGTAAAAACTGTTTGGCGG 1408185 46 100.0 30 .............................................. ACAATGGTCCTGATCGATAAAAGAGATAAA 1408109 46 100.0 30 .............................................. GAAGCGCAACCAACGACACTTGGTCTGTCA 1408033 46 100.0 29 .............................................. GGTTTGCCGGAAAGTACTCGTAGTGCTAC 1407958 46 97.8 30 ......................................G....... TTGATTTCGGCACCGTTTTTTAGAGCACAA 1407882 46 100.0 30 .............................................. CAAAGCAAATAGATAAATATCACGGTTGGG 1407806 46 100.0 29 .............................................. AGAATCGAAGGCACATTAAGAGGCAATTA 1407731 46 100.0 29 .............................................. ATATCATCGTAAAGGATAGCACCTGCATC 1407656 46 100.0 30 .............................................. CAAGGATACAAATACTGTTCAAAGTTATGT 1407580 46 100.0 29 .............................................. ATAAAATAGTTTCCTAAGTTTCCAAAATG 1407505 46 100.0 30 .............................................. CGGAGGTTTTCTTTAACCTTTTCCAACTTA 1407429 46 100.0 30 .............................................. TGGAATGTAAGTGATGGTTACAGGGTGTTG 1407353 46 100.0 29 .............................................. CTACAAATAAATCCAAGCAGTTCAATTCC 1407278 46 100.0 30 .............................................. AAAGAAGGCCCTACTCACGAGATCAGGACT 1407202 46 100.0 30 .............................................. GCCTACGTTGAGTATAATCAGCACGCACTG 1407126 46 100.0 30 .............................................. TTCCACCGCTGCGTCACCTTCGCCGTCTTC 1407050 46 100.0 30 .............................................. GGCACTCAAATACCGTTCGATAAGAAAATA 1406974 46 100.0 30 .............................................. AGTCGCCTTTAGCTGTTCATGCGTTTTGGC 1406898 46 100.0 30 .............................................. TCACAAGGGAATAAATGGGACGTAAACCTT 1406822 46 100.0 29 .............................................. ACAGTAAAATAAATAAATATAAAAAAGAA 1406747 46 100.0 30 .............................................. AATTTTCCTTATCCTCCGTTGCAGTTGCCC 1406671 46 100.0 30 .............................................. TGATTCGTCGGTTGTAAAGGCGAATGTATT 1406595 46 100.0 30 .............................................. AAACAAATTTGGGTAGAAAAGGGGCAACTG 1406519 46 100.0 30 .............................................. GCTCAGGAATTAACGAAAGATAATTTGGAA 1406443 46 100.0 30 .............................................. AACCTGCCATCTTCGCTAAAGAACTGGCCG 1406367 46 100.0 30 .............................................. TTTGATCTTTCAGGTATTCTGTAAATTCAT 1406291 46 100.0 30 .............................................. TAAACGGTGATAAAGGCAAGCAAGCAAGCG 1406215 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 65 46 99.8 30 GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC # Left flank : ATAACCATCGCCCTTCCAGCCAACTTTAGGCCTAAAATGAACAATTATTTTAGCATCTATTTGCTTTGATGGTATAATTGGCTCTCCAAAAACAATACCATCATTTGAGTTCTCCACAATTTTTCCTGCGGCATTTTTATGTATTGTCTCCGCAAAAATAGTATAGTCATTCTTTGACATCTCATTAAAAACACCATTGGATATTTTAATAATGTTTCCTTTACTCATAATTGAAAATGTTTACGACTACAGTATCACTTCTCTTGAAAATCATGTATATAAATTATGAGCATGTTTATAAATAAAACTTATCAGCAAAAATTTTGCCACTTAAAAATGAAGTTAAATAATCTATAGTAAAAAATTATTTAACTTCTATAAGAGAAATGAAAAACCTTTCACCACAACCTTCTACCATTTCTCACCCAATAAGCCATCCGGTAAATACTCTTACTGATATTTACAACAACACTTTTGCGATGACACCACGATCACTGAAA # Right flank : ACGAACTACAACAAACGTTTATATATCAGATAGTTACATTAATAAATAGAATTAAAAAAATCCGGACAAAAAAGCTTCCGGATTTTTATTCTATGTGTTTTTACTTTCGTAAAGTTGACATTTAAAATAATTCGAGTTGTTGAGGAGTATCCGGTAACACTTTTTCTTTCTTTCCATAAAATAACTCCATCATACCAAATTGTTTATCTGTTACTGTCATAATTCCAATATGCCCTTTTTCTGGTAACAGTCTTTTAACCCTATTAATATGTACATCTGCATTTTCTCTACTGCTGCTATGCCTCAAATAAATGGAAAACTGAAACATTGCAAAACCATCCCGTAAAATCTCTTTGCGAAATTTAGACGCAATACTTCGTTCTTTTTTAGTTTCGGTTGGCAGATCGAAAAAAACTAATACCCACAAAATTCGATATTCATTTAAACGCATCAATTAAAATCATAATTTATTAGAATCTTCTTTCTTACTCTATTGTTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //