Array 1 64539-65845 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGTJD010000014.1 Klebsiella pneumoniae subsp. pneumoniae strain EC3089-F-N716-1-636 NODE_14_length_159667_cov_40.927339.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64539 29 100.0 32 ............................. CCTCAATATTGGGATTTACTGATTGAATTGCG 64600 29 100.0 32 ............................. GCACACCTCAAAATACTGTTAATATATACAGT 64661 29 100.0 32 ............................. AACCGGTAAATTATTAAATGTTGGTGCGGCCT 64722 29 100.0 32 ............................. CATGGCTTACGATCAGCTGGCTGAGCGATTTG 64783 29 96.6 32 .........A................... TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 64844 29 100.0 32 ............................. AACTGATAGCACATCGCCTCAAGCTCTGTTGT 64905 29 100.0 32 ............................. GCAATAACGCCCTTCGGCATCACGCCTAACAA 64966 29 100.0 32 ............................. CCTGGCGGGGCGGTCTTCTTTTCTGGCCGCCG 65027 29 100.0 32 ............................. TCACTACTGCAGCCGCCCTCACTGCAGCACCG 65088 29 100.0 32 ............................. ATTTAAAATCTCCATTCAGTTGTGTTCGACAA 65149 29 100.0 32 ............................. GTCATATCATGGACGTCAAGCGGCATTGACTT 65210 29 100.0 32 ............................. GAGGCAATCAGGATTACATTTACCGGACATAC 65271 29 100.0 32 ............................. CGTGGCGGGTTGACCAGATCGGCGATCTGCCC 65332 29 100.0 32 ............................. ATTCCTGCGGGACCTGATAATAAAAAGGTCAG 65393 29 100.0 32 ............................. TACGATAACGCGCAGCAAACAGGCTATATCAC 65454 29 96.6 32 ............................C GGTCCAGTTTGGTTCTTTAGGGCGAACTACCT 65515 29 100.0 32 ............................. AAGGTACTCCATGTTTTTCATAAGCGGTATCA 65576 29 100.0 32 ............................. TTTTTTGGTACAGGTGGGAATACAGGCAACCA 65637 29 100.0 32 ............................. GCGGGAGTGCGAACCGCCGTCCCCGTTATTGT 65698 29 100.0 32 ............................. TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 65759 29 96.6 29 .........................G... GGGTTCACTTGGGTGAAACTGAACTAACT 65817 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 22 29 98.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGGCCGTCTGTGGCTGACGCAGCGCGTTTTGCGACAGCAGGGGGCCATTCGGATGCCACAATCTGCCCGATTATTGATTGAATCCGTCTACGGGGAAGATATCGCTATTCCCGATGGTTTAGCCAAAGCCGAGCAAGCGCAGTTGGCAAAATATTACTGCGATCGCGCGTTTGCTCACCAAATGCTCCTGAACTTCAAGCCGGGATATAGCCCCGATAGCAGTGATTTCCTGGCTGACAAGCTCTCTACTCGCCTGGCAGAAGAGTCGATCACGCTGTGGCTGGCGAAAAACGTCGATGGACAGTTGCTGCCTTACGCCTGCGGCGCGCATCAGTGGGAAATGAGCATGCTGCGGGTGCGGGAAAGCTGGTGGCGTAAACACAAAGCTGAATTCACGCTCCTGGCTGAAAAGCCGCTGCAGCAGTGGTGTGTACAACAGCATCAAAACCCGGATTTCGCCGTGGTGATTATTGTTACAGACTCGCCGGATTGCGGTTATT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //