Array 1 1759331-1758901 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP059679.1 Mammaliicoccus lentus strain H29 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1759330	    36	 100.0	    30	....................................	GTGATAGTACAGGTATAGGACAATATGGTA	
   1759264	    36	 100.0	    29	....................................	ATGGCAGAGAAAAATTACCGTTCATTCAC 	
   1759199	    36	 100.0	    30	....................................	TAATAAGTGGTTCAGATTACGCAGAAGTAG	
   1759133	    36	 100.0	    30	....................................	AATGATGCAGTGAATAGAATTGCAACGCTT	
   1759067	    36	 100.0	    30	....................................	TACACATGGATTGAATAAGGAGGGCGACAA	
   1759001	    36	 100.0	    30	....................................	AGAAAAGAATACGCAAAAACGTGATAGGGG	
   1758935	    35	  88.9	     0	............................TA-....G	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  98.4	    30	GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT	                              	       

# Left flank :   ATTATCAAGCAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGACTTAGTATTAAAGAACAAATAAGGTTCAGGAAAATACTAAACAACTTACCTGTTCCGGTTATTGTTTTAACCGAATCACCATGTTTTTTATCTGAGAGTATTAAAGGACTAAATTATTTTATTAATAATGTTCAAATGATTACTGAATCATTTTTTGAAGATAGCTATTGGAATGCGCCAATTAATGTGGAAAAAGAACAGATTGAAGAGAGGTTTGAATATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCAATTATTTCTAACTATTTGCTTGCGGATATTATTGTTTTTAAAGATATTGATCTTTATATCATTATTTCATTTTTAAAACATTGTAATTTAGAATATCAATTAGATATCGATAAAACAAAAATTTCATTAGCGTTATCAACTTATCTATTTTCTTAATTATATTTCAAGGTTATAATTGTGCTAGGG
# Right flank :  CAAGTATCCTAAATGCTCGATTCCAATCGTGAGCATCTTTAATTCATATATTACAAAATATGACTGCCATATTTTGTGTTTTTTATAAAGTATATTGAGTAATATGTAATTAGGAAATGAATGTTTTAAAAATGCTTCAATAATGTAGAGTAGTACATTTATAGCTTCTTTAACTCAATCCTCTCTTTTTGTTTCTTATCATATGAATCTCAGACAAAATAACTACAATTTAAATTACTTGTTTTTGAGAATTTTATTATTCTAAGTATTTTCAGTTTATTGTTTGGACAACAGAGACTTTGCATGAAATATAAGTGAAAATCTCAACACCCAATGGTTTTTTAATTCAAAATATCAAAAGCAAAAAGGCGATTTGTCCGTTTAATGCACAACTGTTCAAACTATAGAAATAGTAGCTAATATTTATTTGAATTCTAATATACACAAAAAAATACTTCAAACTAAATAACTACCAAATGAATGATCATTTTTATATCAAG

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATAAGGTATAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-3.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//