Array 1 54-3671 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZPM01000052.1 Methanobacterium sp. A39 contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================ ================== 54 30 100.0 36 .............................. ACGCAACAATAAAAGCATTAGAATTAACCAGGGCAA 120 30 100.0 33 .............................. TATGGTGCTGTTTTATGTTCGTTTAAGTATTTG 183 30 100.0 37 .............................. AGAAGTACAATGGTCGGATCTTGCAGGAACGACTTAT 250 30 100.0 37 .............................. CGAGCAGTTCAATCAATCGAAGAAAAACTCAGAGAAA 317 30 100.0 36 .............................. GTATCTGAAATGGAAAATGTTACAATTACAACAGTA 383 30 100.0 36 .............................. AAGAACATTGACTTGCTTAATACTTGCGTGACTTTC 449 30 100.0 38 .............................. TACAAAGTTTGGAAAACAAAATAATAATAAATATCAAA 517 30 100.0 36 .............................. GTATATGAATATAGAAATCCTATAATGGAGGCAGTT 583 30 100.0 37 .............................. AACATTAAATTCCTGTTTATATTTCTCTATTTCTTTA 650 30 100.0 38 .............................. TTAAAACGGATTAGTTTTATATGCTTTTTTGCATCTAT 718 30 100.0 37 .............................. GAAAGTGTGAAAGCAATACTGGCATATCTGAAAAGAG 785 30 100.0 40 .............................. AGATGTAATTCATCTGAAGATAACAAATTTTTAATTGAAA 855 30 100.0 36 .............................. ACAACCAACTATGGATAAAAGGCAGATGCAGAAAGA 921 30 100.0 37 .............................. TATGTTATTGATGAGAATGGAGATGTAAGTTTAGGAA 988 30 100.0 36 .............................. CAATTATTGATGTAACCTTTGTAAAAAATGATTTAC 1054 30 100.0 36 .............................. GGGATTGGAATAGGTGAAGGGGTTGATTTAGGGTGG 1120 30 100.0 36 .............................. AATAGCAAGCACGGGTATTCATTGCGGTAGAATAGA 1186 30 100.0 37 .............................. CAATATTTACATGAGACAGGTACAACTTCAGCATTTA 1253 30 100.0 36 .............................. ATAAGTGAAGAACCAAGACAATTTCAAGCCAAATTC 1319 30 100.0 35 .............................. TCAAACTCGTAGATTTTACCATATTCGAGTACTTC 1384 30 100.0 37 .............................. TCATAGATTGCATATCTCAAATCACTGAAATCACTGT 1451 30 100.0 37 .............................. CAAATTTTAAAAAGAATAAAATAATTTTGATATTACC 1518 30 100.0 37 .............................. TATTCATCCGGGTTTTCTAATGCCTCCTCTAAGAAAT 1585 30 100.0 37 .............................. CTTCCGTAACATCAATATCTGCTGGTTGATTTGAAGC 1652 30 100.0 36 .............................. ATAAGCCAAAAACCAGGACTATTCCCAAAAGACCAA 1718 30 100.0 36 .............................. AGTTTTGTGTAAGAGTTGTGGTGGAAACTTAATGAA 1784 30 100.0 37 .............................. GCATAAGGGAAGTCTGTTGCAAGTAAGATGTTAGGGT 1851 30 100.0 37 .............................. TTATAACACGTCCTCGTATGGGTCATCAGTTGCATAA 1918 30 100.0 37 .............................. ATATAATAACTTATAAGTAATAACTTATAACTAATAA 1985 30 100.0 36 .............................. TTCGCTGAAAAGGCTTTATTATCTGATGAGGCTCAC 2051 30 100.0 37 .............................. ATTAAACGAACCTAAAATATTAAAAGTTCCATTTACG 2118 30 100.0 37 .............................. TTGCCCCATTCCCTTGAGGTTTTACAGTTACTATAAT 2185 30 100.0 36 .............................. CTTTAGATGATATTAAATCATGGCTAGGAATTAAAG 2251 30 100.0 34 .............................. AAAACAAATTCATTTAGTTGAACATATTGTGTAC 2315 30 100.0 35 .............................. GCACGATTCAAATCAAAATTAATAATCACACTCAA 2380 30 100.0 37 .............................. ACAGGAAAAATAAAACAACGTTCCGAAACATGGGCAA 2447 30 100.0 37 .............................. ATCTTTTGAATTATATGTGACAGAAGCACTTATTCCA 2514 30 100.0 36 .............................. AAAAAAGTTTACAATCAGTATCAGCAGAAGCGACAA 2580 30 100.0 37 .............................. TATAATCGCATCAAAACAAAACGTAAACGCCATAAGA 2647 30 100.0 37 .............................. ATTAGGTGCGGTAATCCTGATTTTCCTGTGAATCTAA 2714 30 100.0 36 .............................. AAACGATTAGAAGAAGCAATAAATAGACTAAACAAT 2780 30 100.0 41 .............................. TTAACTGAATAAAACAGTAATCTAATCAAAATTGACAGCAT 2851 30 100.0 37 .............................. AAATGTTAGTACAACGGTTAATGCTCCACTTACTCCG 2918 30 100.0 35 .............................. ACATTTGAAGCAGTGATAACTCTATTAGGGATAAG 2983 30 100.0 36 .............................. CGCATAGCAGTACTAGAAAACGAACTAGGAACAAGA 3049 30 100.0 35 .............................. TTGGAATCTCATTAGACAGTAGTGAAGGAGTAAGA 3114 30 100.0 36 .............................. AAACCACAAAACCAACAAGTTACTTCTGCAATAACT 3180 30 100.0 36 .............................. AGTCATATCCCAAATTGGAACAGTATCTTTTGGTAG 3246 30 100.0 41 .............................. TACGATGAGCTGGTGGCTTACCAGATTGACTTTGACGGTTA 3317 30 100.0 37 .............................. ATAGAATATATTGCTAATAGGGTGTTATGTAATTATC 3384 30 100.0 35 .............................. TTTAACAGGTGTTTGTGGCATTTCAGAAAGATCTC 3449 30 100.0 37 .............................. TACATTTTGGACAAACTCTGTTATCCCTTCTTGTTAT 3516 30 86.7 96 ......................C.CA...A AATTTCTTTGAAATTTTTTGGCGCCCCAAAAATTCTTCGAATTTTTGAGGGGATTGAAATATTTTTAACATCTTGAATAGTGGGCCATTTGAATGT C [3537] 3642 30 93.3 0 ......................C....T.. | ========== ====== ====== ====== ============================== ================================================================================================ ================== 54 30 99.6 38 GTTAAAATCAGACTATTTTAGGATTGAAAT # Left flank : ATTTTAGGATTGAAATTGAAATCTTCTAAACATTCTTGGCTTGCGTAATGAGTG # Right flank : TCAACATGTATGTGGGTTTTTAGCCAGAACCAAACTCTAAACAAAGTAATTGTGGGCATTGCTGCAGGATTGCTGATGTTGACAATATTTCAGTCTGCTTTTTCAAGAACCCGCAAGTGGAAAGAATTTAAAATTAATTAAGTCCTGTGAACTGTTTTTGCATATTTTTTTTACTGAGGAGATATTGGCGTAAAATTAACATGGCCAGATAAAATCAAAATAATCATTGATAATACAAAATGAGTATATACTGCAATCAACGTTTTAAAATGAGTTATACGTGAAAAATAGTATAGTTTAACCTTTTAAAGGATATAAGCTTAAAATTTGTCATTGGTTGCATTATCCTTTTAACATTAGGTTAGAAAATTAAGGTATAAAAACTTAGTCATCAAAATTAAATCAAAAAATACTTATTATATTATTTAAATAGCTACAGCCGGTGATATAATGGTTGTAAAAATAGGAATCATTAAATGTGGTAACATAGGTACCTCTCC # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTATTTTAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 132083-133359 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZPM01000003.1 Methanobacterium sp. A39 contig_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 132083 30 100.0 33 .............................. GCGGCTAACGTATCTATTTCTGCAAAGGGTACA 132146 30 100.0 35 .............................. ACTGTCACTTCAGCTAATTTTGAATTAACAATTCC 132211 30 100.0 37 .............................. CAATGATGTTTTTGAATTTAAAAAAAGTTTATTGCTC 132278 30 100.0 36 .............................. CTTCTCTTAATTCTGCGTACTTTTTTTCTTGTTTGT 132344 30 100.0 36 .............................. TTGAGAGCAGCTATCCATTTAAGCATAAACTTAACA 132410 30 100.0 33 .............................. GCATCTACTGCATCATCATATTCATATTCACGG 132473 30 100.0 36 .............................. TTAACCGATGATAATAACAATGATTTATCATACTAT 132539 30 100.0 34 .............................. CTTAATCACCTTCAAAATTACATAATAATCTGTA 132603 30 100.0 35 .............................. AAAGTAGTTAGTTATCCTGCAAGTATTAAACCATT 132668 30 100.0 37 .............................. AGGACTACTCTTTTTGATTCATCAGAAGAGGATCCTT 132735 30 100.0 37 .............................. CCATACTGGACAGAACCTAATAACTGGCCATTATAAT 132802 30 100.0 36 .............................. ATTAACGTGGATAAATTAGATAATTACGATGCATCT 132868 30 100.0 35 .............................. TTTTTTAATTCAATAGGCTTAACCATCTATAACTC 132933 30 100.0 33 .............................. TTACTGCATTTAACCTCTGCCCTGATGAACTCA 132996 30 100.0 38 .............................. TTGACATGACTCTATCATCAAATAATATTCTTTTAGTT 133064 30 100.0 37 .............................. TGAATCTTTCAAGTAGTACTTGGTTTAAGTCGTCAAT 133131 30 100.0 37 .............................. GTTACTGTAATGCTGTCTATAAATTCTAAGTTTCTCA 133198 30 100.0 36 .............................. TTGAAGATGGGCCTGCATCATATACCTCGCCAGAGG 133264 30 100.0 36 .............................. CCAATAAATGAAGCAGTAAATAAAGTTCCTACCTCC 133330 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 100.0 36 GTTAAAATCAGACTATTTTAGGATTGAAAT # Left flank : CGAACTTGAAGAAATAAAAACAGGTTTGCTTGATATTATAAACAAAAATGAGGATTCTGTGATAATATACCGGTTCAGAACAGATGATGCTTTCACCAGAAAAGTTTTAGGTGTTGAAAAAGCACCTATAGATGGAATACTTTGATTTAAATTAGTTTATTTTGATTTAGATACATTTATTTTAGTTTTTCAGTGTTTAAAGCGTAATTAGTGGATCGTTTATCAATTGAATTTTTAACTCCTGATTAAAATAACTTTAGGTTATTTTATCTTTAACTTATTTTAAAAGATGTATAACATATTTATTTGGGTTTTACCATGCTATTTTATCTTCAAATAAATAAAAAATATATATAAAATTCTAATTTTTTAAATAAAACAATTATTGAAAGTCGTTGATCCATATAAAGGAACTTAGGAATTATAGATCGACAATTTTAAGTGTTCAAAAGGCCAAAGAATAGCATGTATTTAGAGGATATAGGGCAATTTTCTCGCCT # Right flank : TTTGGTATGGTATTTTTAAGTGTTCCGGTTTTATGGTTAAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATCAGACTATTTTAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //