Array 1 4870-6877 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPS01000163.1 Acinetobacter bereziniae strain TUM15331 sequence163, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4870 28 100.0 32 ............................ TGAATTTAAAAAAGGGAGCGAACTCCCTTTTT 4930 28 100.0 32 ............................ TTTTCACATGTCGAAGTGTGGGGGGTAAATCA 4990 28 100.0 32 ............................ TGAAAAATTACGCATAAATGAAAGAACTTTAG 5050 28 100.0 32 ............................ TTCATGTACAAACTTAAAAGCCATCTTTGTGT 5110 28 100.0 32 ............................ TGAACTTCGAATCACAACATTATTCCGCGAAC 5170 28 100.0 32 ............................ ACAAAAGCAGATATTCAATATACTGCTACTGC 5230 28 100.0 32 ............................ TAGGAGCTAAAAAATGTCTCAACGTCAACCAG 5290 28 100.0 32 ............................ ATATTTGTCGAAACGTATACCGCATTTACGTT 5350 28 100.0 32 ............................ AATCGACAATCATAGGACGTACATTGTCGACT 5410 28 100.0 32 ............................ TAAAAATTTGTTTGGTATGTATAAAAGTTCTG 5470 28 100.0 32 ............................ AACTCGGTAATCGTGCCCCAAATGTGGAACAT 5530 28 100.0 32 ............................ ACAAACCGAAACAGACCCAACTGGTTCAACAA 5590 28 100.0 32 ............................ GTTGACAGCGTTTCAGTTCAAGCTGTCAATGG 5650 28 100.0 32 ............................ ATTTGGCATTACAAGTACGCATGAATATCTAT 5710 28 100.0 32 ............................ AAGCTCGATTGATTTTGATTTGATGAATCAGA 5770 28 100.0 32 ............................ TCCAATGATTAAACAGACAATAACCATACCAA 5830 28 100.0 32 ............................ TACAGTCTGATTGTGATACATCTAACTTTGTG 5890 28 100.0 32 ............................ ACACAAACGAATTTATACAAATATTGTAGGTT 5950 28 100.0 32 ............................ ATGCCAAAAAAGTTATTGAAATCGAAGAGGTT 6010 28 100.0 32 ............................ ACTAGAAAAAGTCATTAATGCTACTGTATTAG 6070 28 100.0 32 ............................ ATCTTTCACAGATAAGGAGAAGAACATGGAAA 6130 28 100.0 32 ............................ TTAACCCATAGAGCAAGTAGATCAAAGCACCG 6190 28 100.0 32 ............................ GAAATATGTTCCTGTTTCAGACACAGAACTCG 6250 28 100.0 32 ............................ TTGGGCATTTGTAGACTGCTCTACGTTGATTA 6310 28 100.0 32 ............................ TGTTGAATTTTTTAGCGCATTTACAGCAATAC 6370 28 100.0 32 ............................ AACACGGATAAAACAAACAAACAGTCTCCCGA 6430 28 100.0 32 ............................ GAAATATTGAGCATCAAGGACTCGCCAAGCGA 6490 28 100.0 32 ............................ AACACTTACTCAAATGGACAGACATGGAGTTG 6550 28 100.0 32 ............................ ATTCAGGCAATTGTTGATTGAAGTCGATCTCA 6610 28 100.0 32 ............................ TTGGTCTTCTTGGTGCAGTAGTTTATGGAATC 6670 28 100.0 32 ............................ TACAAATTTGAAAACAGACTCAAGCGGAAAAT 6730 28 100.0 32 ............................ TTGATAATCATAGAAAAATTGAGCACCTTTGA 6790 28 100.0 32 ............................ AAACATGCCTATTCATCTTCATACAACTGATA 6850 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 34 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : GCGCTGGGCGAAAACATTATATAAACAACTTGCTAAAGGATTTGGAATTGAATTTATCCGCGATGAAGGAAAAAATTCTCACGATACTATTACAGATATAGCCAACAATTACCTAGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGGATTAGCTTTGCTCTACCTATATTACATGGCAAAACACGCCGAGGAGGCTTAGTTTTTGATCTCGCGGATCTAGTCAAAGATGCTATCGTGATGCCTATAGCCTTTATATGCGCAAGCAAGGGTTTAAATCAAAAAGAATTTCGAATGCAACTCATCGAGACTTGCCAAGATCAAGATATTTTAGATTATATGTTTAGCTTCATTACTGAAATATGTAGTAAAATTAAATAAAATCAATATCTTAAAAACAACTCTTCTCTACGAAGTATTTTTACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTTTA # Right flank : TTTAATCTTTTCAAAATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [85.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8225-7717 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPS01000152.1 Acinetobacter bereziniae strain TUM15331 sequence152, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8224 28 100.0 32 ............................ AAGATCTGGATTGAATTATGAATCATTACCAA 8164 28 100.0 32 ............................ CAATTCTCAACAACTAATTCAACTACAGGTAC 8104 28 100.0 32 ............................ AAAATAATATTGATGCTTCTTCCATATTTGAC 8044 28 100.0 32 ............................ TAATAGCGTTGCTATGAGAAATAGCCACCAAA 7984 28 100.0 32 ............................ TATCGAGACGGCATTAAATCATCCGAGCATGT 7924 28 100.0 32 ............................ TGAAACAGGTCAACAAACTGGTGGTCAATCAA 7864 28 100.0 32 ............................ TTGCTTGATGTCAACGAAGATCAGTTGAACTT 7804 28 100.0 32 ............................ ATATCTGCTATGTAGCCTTTACCTCTTGTATG 7744 28 82.1 0 ......................ATCCT. | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACAGAAAACGCTTTAG # Right flank : TCTAGAAACAGTCAAAACATTGTAATGAAAATTAACTCATCACATCATCCAATACTTTTACCATTAAAATTCTCTTGTATTTATTTTTAAGAGTCAATTTAGACTCCACTCAACTATCAAAAAAATCCCCGCACAATGGCGGGGATTTTTTTATGATCTGAGATCAGAATGACTTACATCATTCCGCCCATACCACCCATTCCGCCCATATCAGGCATAGCAGGTTTATCTTCAGGAATATCTGTGATCATACATTCAGTTGTTAACATTAAACCAGCAACAGAAGCAGCATGTTCAAGTGCAGAACGTGTTACTTTTGCAGGATCAAGGATACCCATTTCTAACATGTCGCCATATTGTGAAGTCGCAGCGTTGTAACCAAAGTTACCTTCGCCATTTTTCACAGCATTGATCACAACCGAAGGCTCATCACCTGCGTTAGAAACGATTTGACGAAGTGGTGCTTCAATCGCACGACGAAGGATATTTACACCTACAGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4689-5378 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPS01000059.1 Acinetobacter bereziniae strain TUM15331 sequence059, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4689 28 96.4 32 ...........T................ ATATTTCAGTTGTCTTTTCCCCGATTAACCAT 4749 28 96.4 32 ...........T................ TTGAATAGCACCAAATTTCTTTTGAGAATTAT 4809 28 96.4 32 ...........T................ TAAATCCAATCTCATTCGTTAATTTTGATCTG 4869 28 96.4 33 ...........T................ TGATTTAAATTTAGCAAAAACAAATACATAGAT 4930 28 92.9 32 .......G...T................ AATCAATGACCCTGAATACAAGGTGATTGAAA 4990 28 100.0 32 ............................ TTGATATTCAAAACATTTGAACGAACTAAAAA 5050 28 100.0 32 ............................ CGATCTTGGTGAAAACGATCAATACCGTTGGG 5110 28 100.0 33 ............................ ACTCAGGGGCATGAAAAAAATCATACTCTGGGT 5171 28 100.0 32 ............................ ACCAAGAGTTAAAAAGTTGCTTACCACCCATT 5231 28 100.0 32 ............................ TGTTTGAACAGGATAGAGGCAGGCAAGCATTT 5291 28 100.0 32 ............................ TTGCTAACATTTTGAATTGCCGAAAAGTCTGA 5351 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 12 28 96.4 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAATATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : ATATAAACGCCTTAACATCTTAGCTAAATTTAGAAAATTACAAATGATATGGAATAATTTTTATAGTAAGTAAAATATGATAATCTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTTCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTGGATGTGAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGTGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 54280-54787 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPS01000009.1 Acinetobacter bereziniae strain TUM15331 sequence009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 54280 28 100.0 32 ............................ TTCATCATCTATGTTTAATTTTCCTACAGTGA 54340 28 100.0 32 ............................ AAGATATAGCGATAACGTAAATCGTCATCAGT 54400 28 100.0 32 ............................ GCACGTAGGTGAAGTACCACAACCGACACAAT 54460 28 100.0 32 ............................ TGCTGGCGCTAACGCTGTGCTCGATGTGTACC 54520 28 100.0 32 ............................ CTTGAGCAGAACTCAATTGACCAGTGATTGCA 54580 28 100.0 32 ............................ AATAATAATTATAAATAAAAATCAATTAAAAA 54640 28 100.0 32 ............................ ATTCAAAAATAAGGGAGCGGACGAACCATGAT 54700 28 100.0 32 ............................ GACTCGTCAAGCCGTTTATAAACAAATAAATA 54760 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATCAAAATGATCTTTTTTAGCAGTTTATTGAGCTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTTTTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCGAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTCTGATGTCATCTTTTTTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTCAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //