Array 1 2376256-2376940 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042266.1 Streptomyces qinzhouensis strain SSL-25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2376256 30 100.0 37 .............................. ACCAGCAGGCTTGCCCGCTTGCGCGATTCATGCAGGG 2376323 30 100.0 35 .............................. AGGCTTTGGAGCTGCCGCGCCGCAAGCGCCGCGCG 2376388 30 100.0 36 .............................. AGCTGAAGCTCGGTGCCGCGGTGCCTGTGGCGGCCG 2376454 30 100.0 34 .............................. ATCTTCAGCGCGGCGCAGGTGTCCGGCGGGGGCC 2376518 30 96.7 36 T............................. GTGACGATCGCGACGTGCCCGGGCCAGAAGACCAAG 2376584 30 100.0 36 .............................. GCTCATGGCTAACCCCCAGGTGCGTTCAACCTGTTC 2376650 30 100.0 36 .............................. GTGCGGCGGGTGCCGAGGCGGGGCCAGCCGAGACTG 2376716 30 100.0 36 .............................. GTCGTGGGTCCGGTCTGGCCGGCTCCCCTCACCGCC 2376782 30 100.0 35 .............................. AGAGGTACAAGAACAGTCGTTCGGGCGCGGTACTC 2376847 30 96.7 34 C............................. GCAAGCTGCGCGGCAAGGGCGTCCGACCGTCCGT 2376911 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.4 36 GGTCGTCATCAACCCAGGAGGGTTCGCAAC # Left flank : CGTTCAGCGGCTGCGGTGAGAGCTTGCGGGCGGCCCGTCGGCGGGCTCCATGGGGCGGCCGGGAGACCGGTGGCATTTTGGCCGGGGGCTGTTACCGGCGCCTATGGCCCCCGACACCTTCCCGAAGCATCCGGGAACGGGTCCGCTATCCCGGAGAGGACTCGGGAAGCCACTGCGAAGCTCGGTCACACCACTGGATTTCGCCAAACTGAGCGGTCAGGCTCCCACCACCGGGTGGCCCGGGTCCCCGATGAACGTCGGGAACGACGGAGACTGGCAGACATACCGGCTGCGACAGGACACTTGACGCTGTTGCCGGGTGACGCAAGAACACCCCCGAATCGGCCCGGTCCTGACATGCTGAAGGCGTCCTCCTCAACGTTCTGCCAGATTTCGAGGACACGCTCTGACCTGCGCAGATGCACTATCGCCTGAACGCTGCAAAAGTCGCGTGCGCGAAGGCTCACGAATGCCGGCTGACCTGCGACTTTACTCTCGGG # Right flank : CAGCACTGGTCGGCAGGCCTCGGCTGCCCAGTCGATGTCGACATCAGCAGCTCCAGCGCCGCCGCGTCCAGGAAGCCGAGCCCCTGTGGTACCGGAGCCACGTCGATATCCCAGCCCTGGGGCTGCGCTGCGGTGATCAACTTGCGTGTCACCTGCAACTCCGTTGGCCTATAAAGCGATGTACAGAAAGGGCTTCCTCCCTCAGCCGCTCAGCGCCTGGCACCTTCACCGGCCGTCACAAGCCTCGCGACCTCTTCGGCGCACCCCCATGAGAGCGTGATGCCGGCACCCCCATGGCCGTAGTTGTGTACGACCACAGTGCCGTCCTCCTGCTGCTCTGCCTCCACGCGGACAGTGGCTCGGGTCGGTCGAGCACCGATTCGGTGCTCGACAACGTGGGCCTCGGCGAGACGGGGTTCGACCTCGGCACAGCGAGCCAGGATGCCGGCCGCCGCCTTTTCATCGGGAGCAAGATCGCCCTCACCGTCGATCGCGGTACC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGTCATCAACCCAGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 2385360-2386831 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042266.1 Streptomyces qinzhouensis strain SSL-25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 2385360 29 100.0 37 ............................. CGCCGCGGCTGGCCGTGGTCGCGGCGGCTCGGACTAG 2385426 29 100.0 36 ............................. GAGTACGTGGCGGTGGCGGCGAGTGCCCCGATCTCG 2385491 29 100.0 36 ............................. CCGGGCCGGGACTCCGGGGGCCGGGAGGTCAATCCG 2385556 29 100.0 36 ............................. GGCCCCGGCCCGTGACGGGGGCACAGGCCGGGGCCG 2385621 29 100.0 36 ............................. CCGCAGCCGCGGGGAGCGGCAACCGCGTCCTCCCCG 2385686 29 100.0 37 ............................. GAGGTGACGGGCGGCGGGGTGGCTGTGCGGTCTTCGT 2385752 29 100.0 40 ............................. GCGTTCACGGGGCGGATCAGGGACGCGGGGTCGAGGTCGG 2385821 29 100.0 36 ............................. AGGGCAGAGGCGATGAGGAGCAGGAGCGATAGGGGT 2385886 29 100.0 37 ............................. TGCCACTCGGGCTCCTCGCCGTCCTCGAACGGTTCGA 2385952 29 100.0 36 ............................. AAGACGATGAGCCCGTTGCACAGGACCGCCCAGCCC 2386017 29 100.0 39 ............................. ACTGCCGCGACGATGGCTGAGAGCTGCTTAGGGGTGGGC 2386085 29 100.0 36 ............................. GGCCGGCTGCTCCGGCTCCCCTCACCGCCCGCCCGG 2386150 29 100.0 36 ............................. GGGTGCAGGGCAGCGGGGCCGGTCCGATGAACACCT 2386215 29 100.0 36 ............................. CGGCTGCGACGAGGTCGACCGCCCATCCCCGGGCCG 2386280 29 100.0 35 ............................. GCTGACCTTCTGGTGGCCCTGCTGGATGATCCGGC 2386344 29 100.0 36 ............................. TTCAGGGTCAGACGGGCCTGCGGCCGGTCGGAGGTC 2386409 29 100.0 35 ............................. AGGATCTCGGCGGAGGTCCAGCGCCGCGCGTCGGG 2386473 29 100.0 36 ............................. ACGCGGGCGGCGCTGACGCCTCCGAGGAGACGCCCG 2386538 29 100.0 36 ............................. GCCCCTCCTTCGGTGAACCACGGCACGGAATCCCAC 2386603 29 100.0 40 ............................. ACCCACCGCAGAGAGCGCTGCATCAGGGCGGCGAACTCCT 2386672 29 96.6 37 ....................A........ ACCACCCGGGCCCCCGCGTACGACACCGGCGTCCCCG 2386738 29 100.0 36 ............................. CGGGACCCCAAAGGCAAGCGCCGCTCGGTCGGTGAC 2386803 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 23 29 99.9 37 GTCGTCATCAACCCAGGAGGGTTCGCAAC # Left flank : GCCGTTGAGTGGGTGCGGTGAGGGCCCGAGGCCGACCGGACGGCGGACCCAGGCGCGGTGGCCGGGAGCCCGGCTGCGGCCGCTCGGGAACTGCTGGCCGACGGCTGTTCTTCCTGGAAACCTCGCGAAGTGTTCGGGGTGGGCTCTCTGCCTCGGGGAGGGCTCGGAGAGTCGCTGCGAAGGTTGGACGCACCGCTGGATTTCGCCAAACTGAGCGGCCAGGCTCCAATCACCGGGCGGCCCGGGGCCTGATGAACGTCGGGAACGAAGGAGACTGGCAGACATACCGGCCGCGACAGGACTCTTGACACTGTTGCCGGGGTGGCGCAACAACGCCCCTGAATCGGTGCGGTCCTGGCATGCTGACAGCGCTCCCTCAACGTCCTGCCGGACTTCGAGGACATGACCTGACCTGCGCAGATGCACTACCGTCCGACCGCTGCAAAAGTCGCGTGCGCGACGGCTCACGAATAGCCGCTGACCTGCGACTTTACTCTCGG # Right flank : CCGCTAAGGCGCCGGGGCCGGCGCCATGCCAGACCCACCCCGTCGAGCTTTCGGCCATCACCCACGCCGTCATTCGCCCACTGGCTAGACCTGACCCGCCCAGCCACGGCTAGAGATCATCTCCGCGCTGGACACGATCGTCATGCGTCCAGCGCCGCCCCAACGCCTGCCCTACAGTGCAGCAACTCCTCGGTAGCGCTAACCCCCAGGTCAGAGCGATTCAGCAAGCCCACCCGCGTGGGCGCAGACTGGCGCTAGGCCAAGGCGCACACAGGCAACACCAGCGCGAGTCCCAACCTGGCTCCTGGTTCATTGGAGCCGTCCGGATCAACTGCGTCCGCAATCCGGGCTTGCGTGCCGCGCCGCCGATACCACACATGGGGTGATCCAAACGCTATATGACAAGAAATCATCATCCGACCGCACGATCCCCACTAGCTTCGCTTCATATGGGAGTTCGGTTGATCGGATGCACGCGTACTTCATGCAACGGGTGGTCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAACCCAGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 2395448-2395811 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042266.1 Streptomyces qinzhouensis strain SSL-25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 2395448 30 100.0 36 .............................. GCCCCGGATGGCTGGCAGACGAGATCCGCGAGTACC 2395514 30 100.0 38 .............................. TGGGGGTGTCCGCCTCCGGAGTGGCGGCCGGGTCGGGG 2395582 30 100.0 43 .............................. GTGAGCAGCGAGCGGATTCGCGCGACGCTGGACGGCCAGCGAC 2395655 30 100.0 34 .............................. ATCGCCCGGACGATCAGCGCCCGCGCATCCGCCC 2395719 30 96.7 33 C............................. AGGTATTCGTCGGCGGCTTGCCGCATGTCCTCG 2395782 30 93.3 0 .....C.......................A | ========== ====== ====== ====== ============================== =========================================== ================== 6 30 98.3 37 GGTCGTCATCAACCCAGGAGGGTTCGCAAC # Left flank : AGGAGCTCGCGACGACGGTCCACCACCGGGGCCTCAAGCGGAAGGTGAGCTACGAGGAGCTGATGCACCTGGAGGCGCTGAAGGTCGTCCGATTCTGTCTCGAAGGCACGCCGTACAAGCCGTTCCGGCCGTGGTGGTGAGGGGTCGTGTTCGTCATCCTCGTGTACGACACGGCTGTGGAACGTAACCCGAAGGTGCTGAAGACCTGCCGGAAGTACCTGCACTGGACGCAGCGGAGCGTCTTCCAGGGCGAGCTGTCGGCAGCGCAGTACAGGGCGCTGATGGCCGCGCTGGGCACGGTGATCGATCCGGAGTACGACAGCATCGTCACGTACACGGCCCGGTCACCGGAGATGGTGGAGTCGGCGACGCTGGGGGTTGCTCTAGGTGGCCCCGGAGACATTCTCTGACCTGCGCTGATGCAGTACCGGCGGAGTCCTGCGAAATCGCTACGCGAAGGCTTAGGTGAGTGCCGTCTGACCTGGGACTTTACCCTCGGG # Right flank : ACGCTCCAGGCGCGCGGCAAGGCCGGCGCGCGGCTTCTGTCGTCGTCAACACCCAGGAGGGGTTTCCCGAGATCCGCCGAAAACAGCCCGCTTGCTTGCCTGCCCAGGCGGCTACCCGGGCAGGCCAGGCAGTGCTCGTCAGCCAGGCGTGGCAGAGGCCGTCAACGCGTCTCCGGGTCAAGGAGGTATGGGTCGTCGAGGCGGGCGTCGGCCGCGCGGTCGTGTATGTCGGTGAGGAGCCAGGGCAGCAGTTCCGGAGTGGCGTGGTATTCACCGTAGAAGCCCATGCGCAGGTCCGTGATCTCCCACTCGAACAGCACATCGTCGATGAAGTCCGCCAAGTGCGCGTCGGCGGCCGGGTGGTGGGTGGCGGTCCAGATGTTCAGCCAGGGGCGTATGTCGTTGGTGACAACGGTGAGGAAGCTGAGGGTTTCCCTGATGGAGACCGGGCTGGGGTGCGTGTGCAGGGTGTCCTCCCACCAGGCGGACCAGACCTCGCT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGTCATCAACCCAGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 4 4978800-4978949 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042266.1 Streptomyces qinzhouensis strain SSL-25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4978800 28 100.0 33 ............................ GGGGCGGGAGGTCAAGGGCGCATTCCTGGAGGC 4978861 28 100.0 33 ............................ TATCGGCCAGGCCTTGACGAACCTGCTCATCGC 4978922 28 92.9 0 ....G...................T... | ========== ====== ====== ====== ============================ ================================= ================== 3 28 97.6 34 CTCGACCCCGCGCCCGCGGGGATGGTCC # Left flank : CGCCACACCCGTCCTGCACACACTCCGCGTTACCCGCGGCACCAAAAACACCCCATTCTTCCTGGAGCACCTCCGCACCAGCGGCAGCCAAGCCCAGCTCGCCTACCGCATCACCGCCGACACCGCCCGCCCACTTCAGCCAGTCCGGAACTGACCCGGAAAGGTGATCGGTCCAAACCTTCTTCACTTACTCAAGGGCGTGCCTGCGCGCCGGGCGACACCGCCTCGCCACCGGAGCCACCCCTTGCCACTCAAGCCCCGGACACACACCACCGTGACGTTGCTGGACGGGAACGGACAGCATCGGGAACGATGGCGACACGACACGATCTCCCGAAACAAGGGGCTGCCGAGTGCCTCGTGCCAGCCTCCCGGCCATCATGGTCATGACCATGGCGCTGTCCGATTCCCGTCAAGCTGGCTCGGTCGGTAGCCGTGGCCCCGCGTTCCAACTAAACGAAACCAGCGTGAACCGCTGAAAGAACCCCAGGTCAGCAAGC # Right flank : CGACGGCGGCTCGCCGGGACCTGGTCGGCCTCGGGTCGGCCCGGCGGGGGCTGCGAACAGCGTGGCCGGGGGCCGTGGCCTGCAGGGCTTTAGCAGCTCCCCTGGAGCGCGCCTTGAAGAGCAGGGGTCCCACTCGGGCCATTGCGTGCAGGTCCACGGACTGCCCGAGCCGCGCAAGCTTACGGGCCCCACCATCGGCACCGGGGTCCCACGTGGATCACCAGCCGGCCCCCCCGTGAAGCTGCCAGACGAAGGGGTGGTCCGGCCCGCTCAAGGCGCCCGTCAGGGCCGGAGCCGGCCGGAGCAGCTACGGCCCCGGGGTACTGATCACCGCCAACGGCAGATACGCCGCCGTGCAGAATACGACCAGTAAGAACCAGCACAGACGCTGCCTCACGGGGAACCACCACCCGACGACGACACGGGCCGCCGTAAGGCGCACGCGCCACTGTCCCGGCAGAACACGAACACCAGGCGCCGGGTGCCACCGGGGCGACCAG # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGACCCCGCGCCCGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 7607971-7607043 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042266.1 Streptomyces qinzhouensis strain SSL-25 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7607970 28 100.0 32 ............................ CCGGTGCAGATGATGATGGTGAGGATCGGTTT 7607910 28 100.0 32 ............................ GAACCTGTGACGACGTGTTTCATGGCGTGTCA 7607850 28 100.0 32 ............................ CGGACGGCGCCGTCGGATCCGGTGGAGACGAC 7607790 28 100.0 32 ............................ ACGAGCCGTACGTGAGAGTGCACCTCGCCCGG 7607730 28 100.0 32 ............................ CCGGCCTCCTCCTCGCCCTCCTCGGCGCCGTC 7607670 28 100.0 32 ............................ TGGACGCCGACGGACTCGCCGGTGAAGGACCG 7607610 28 100.0 32 ............................ GTGCTGTGCAGGCGTGCGATGTCCTCCGTGCG 7607550 28 100.0 32 ............................ CTTCCTTGCTGGCAACGGCTGTCCGGATGAGT 7607490 28 100.0 32 ............................ TAGTAGGCAGCGATGACCGGCAGGCCGAACCC 7607430 28 100.0 32 ............................ TGCGGGCTGCCGGTCGCAGGGACGGAAGAGAC 7607370 28 100.0 32 ............................ GCTAGGCAGCCGCCTCCACCGCTCGCTCGTAG 7607310 28 100.0 32 ............................ CTGACGGCCGCGTTCCGCGCTATGCCCCGGCT 7607250 28 100.0 32 ............................ GTGAGCGCCCAGGCCGTGCCTTCCAGCATCGC 7607190 28 100.0 32 ............................ CCCCACATGCCGTACACCGAGACGACCATGCC 7607130 28 100.0 32 ............................ ATTCTCTTCACGGTGCTCGTGGTTGCCGTCAT 7607070 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 GTCCTCCCCACCGCGTGGGGGTGTTCCG # Left flank : GAAACCCCGATACCTTCCCGATATCGTGCAGCCCGGCGCACAAGCCAACCAGGCTCCGCGCCCGCTCCGGCTCACCGGCCAGACCCAAGCCCCGCTCAATAGTCCTTCGCTGGCCGTCCGACAAGTAGACATCCCACAAATGCAGCGCCATGGCAGCGGCGTCAACCAAGTGCCTGACCAGCGGGTATGGAGGCAGCCCCGGGTCCAGACCTCGCGACTTCGCCCAAATCGACTCATCCGCCATAGCCCTGGGCACACCCATTCCCGCACAACCCCTCACGCGCTCGCCGGCCAATGAGTCAAGCAGACCGCACCGACAACGGGCCCCATCCACACCACAGACCGAAGCAGTCCGCCCCTCACAGCACCCGCCATCACAACCACCAGCCCCCGCGATACCCCACGGGATCCGCAGCTACAGTGAGGGAACTACATCCGGGAGGCACAGTGCCATCAGCAAAGGCAAGGCAAAGCCACTCCTAACGTGCAGGTCAGAAAGG # Right flank : TTTTCCTGCTGCTCTCCCCACCGCGTACGGACACGGACCAGCCCACACCGCACCCCCATCCTCTGCATAGAGCCAAGAGAGTGACGACGGGCAGCGGGATTTCCCTGGGACTTATCTGGGACTTCCGGCTGCATCAACGGCCATGACCATGAAACAACCGAAAGAACATTTGTGCAGGTCAGCTGCGCGGTACCAGCAAACACGGCAGGTCACAGACCTGACTGGTCTCTTCCGCGACATCTGCTCACAGCTTCGCTGGAAAGCCCCCAGTCCCGCCCCCGCTTTGACTCATCCCCCAGGGGCGGCCACCACCTGCACGCTCACGCTCAGTCACAGAACCAGGCCGACTGGCGACTGGCGACTGACGCCGAGCCTCGGCGCTCATCTGGGTCACCTTGGGCTTGACGCTCATATGACGCTCGGGACCCAGAATTCGCCACAATCGTGCCCACCAAATAGCCTCTGGCCTGCCCCTATCTTCAACCAGGCCAAAGCCGACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACCGCGTGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACCGCGTGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.50,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //