Array 1 184304-183890 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOE010000003.1 Streptomyces sp. CAI-24 NODE_3_length_280978_cov_586.988, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================== ================== 184303 29 100.0 32 ............................. AGGACCCTGCCCTCGGACTTCCCCGACCCTGT 184242 29 100.0 32 ............................. GCCTGGCGGCGGTCGGCGAGCCAGCCGGTCAT 184181 29 100.0 32 ............................. TCGTACGGGTCGTCCGAGGCCTTCCCCAGGTA 184120 29 100.0 32 ............................. CGGCCGTACAGGTGCTCGCTCAAGACGCGCGG 184059 29 100.0 32 ............................. GTCTACCCGAAGAGGTGGAAGTCCGTGGTCAA 183998 29 100.0 51 ............................. GGCAACGCTGCCGCGACCGCTGCCGCCCCTGCGGTCCTGGACCGTCTCGCA 183918 28 82.8 0 ...........A..C......G..C-... | A [183892] ========== ====== ====== ====== ============================= =================================================== ================== 7 29 97.5 35 GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Left flank : CACCGCCCTCACCGCAGGCCTCCCGGCCGAGATCAACTCCCCGGTGGGCTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCACCCCACCTGCCCCCGGCGACCACCACTCGCCCCACCCCGGCCACTCCCGCCGCCCGCGTCCTGGTGGAATGCACGGACTGCGGCACACCGGGCCCCTCCGAGGCCCTTCCTGACGGCCTCTGCCGCCCCTGCCGCGAAACCTGCGCCACCGGGCCCGGCGACCCGTCACCCACCCTGCCCGCACCACCCGATATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCACCCTATTCAGGGGAACGGGGGTCGGCCTTGGCAACCGAGGGGCAGAATCGCCTCTGGCAGGGCGAGCAGCCGACCCAACGGCGATCAATACGGTGGGGGATATGTCCGTTTCCCAAGAAGTAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGACCT # Right flank : TCAACGAAGCTGGGCTCCTGCCGGTCGCGGCCCTCGGCGGATGGCGGCCGCCGGAGAGTGTCCGGCTGATCATGACGGCCTGCGGAGGGTCGGGCCGTAGCTACCTGGCCACCAGCCGTGACGGTGTGGATACGGCGCCCCGTATCATCCCGCCATGATCATGCTATCTATTGACCCCGTCTCGCGGAGCTACGCCGATGGCCAGGCAGTGGGGCAGCTTCTGGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAGCCACCGCCATCGCCGTACGGCGTGGCAACATCGTCCGCGGAGTACTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATTTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGCCCCAAAGCCTGTCGCCCAGTCGCCCTCCGCCACGACGGGGCCTGCGGAGATCAAGCGCG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8288-9111 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOE010000050.1 Streptomyces sp. CAI-24 NODE_50_length_45870_cov_518.551, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 8288 29 100.0 32 ............................. ATCACGCACCGCCTTCCGTGCCCGTGATCTCG 8349 29 100.0 32 ............................. GTCACCTCGGAGCGGCTCGGGGACTGGGCGGT 8410 29 100.0 32 ............................. CGGGGCCGCTACCAGGTGACCGGCCGCCGGGT 8471 29 100.0 32 ............................. GAGGGGGATCCCCTCCCTGCCCGCCGCTGGTG 8532 29 100.0 32 ............................. GTCTCGGCGGGCATGGGGTTCATCGGTCTACT 8593 29 100.0 32 ............................. TTCGTCCCGGCCGGGGTGGTCTTCCATGCCAC 8654 29 100.0 32 ............................. CCGCCGCGGATCCCGTGGCGCCCCGACAGGCC 8715 29 100.0 32 ............................. ATGGAGCAGCGGCGGCGACGTCCCAGTCCGCT 8776 29 100.0 32 ............................. TCACCATGGCGGTAGGGCCGTCCGGCGAGCGG 8837 29 100.0 32 ............................. TCGCGGTTGTCGGGACCGTCCGTTCTCTGGCC 8898 29 100.0 32 ............................. AAGGGCACGGTCAGCAAGCTCGTGAAGTCGCT 8959 29 96.6 32 ..G.......................... CTAAGGCACATGCTGGCGGGCATTGCCCCTGA 9020 29 93.1 33 ..G.........................T GCCTCCAGGGGCATACGTAGGAACCGCGCAAGT 9082 29 89.7 0 .....................AC.....G | A [9107] ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.5 32 GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GGCGGCCATCGACTCCCCCGTGGGCTTCCTCCGCCACCGCCTGACGACCAAGACCCCACCCCAACTCCCCACCAAAAACACCGGATCGGGCACCACCGCCCCCACCGCCTCCAGCCTCCTCGTCGAATGCACGGAGTGCGGCACCCCGGGACCCCCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCCACAGCAAAGGGCCCGGGGACCCTTCGCCCGCGCCCGCCGCAGCACCGGACATCAAGGCCCGCATGGCCAACCTCCGGAACCTCCTCAGAAGCGTCTGAGGCAGGCGACGGCGGTTCAGGATCGATTGGTCGGCCTCCTATCCGGGAAACGAGCCGCCAGCCTCGGCCAACAGGGGCAGAATCTCCCCAGGCAGGCCCCGAGTCCGGAAACGGCCGTCTGCACGGCGAGGGAGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACGAGCCTCACGCCGCATAAAACCGCAGGTCACGAACT # Right flank : GCCTCCGTGGTCGATCCCCCACCGGGCAGTCGGCGCACAGGAACCCTGCTTGTCCGGGCAGTCCGCGAGGTCCGCTGAGTCCGGGCTACAGCGCCTCGCCGGGAATCGACAGATAGGCCTCGCGGAGGCGGCCCAGCAGCGGGTGCTCGGCGGCGAACCCGGTCCCGTCGATGGCCGCCAGGGGGCGGACGCCGATGCCCGCGTTCGTCGCGAAAGCGGCCACCATCACGCGGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTGGGCGGGCGGCGTCGGGTGCTCGCGCAGCAGGGCCATGGTGACGCCGGGCAGTACGCCGGATCGTGGCCACAGCACGGTGCCGTCCCGGTCGATGAGGCCCACGTTCCAGGTGGCGCCCTCGGTCACGTACCCGTCGCGGCCCACGAACAGCGCGTCGTCGTAACCGGCGAGCTGCGCCGCGCGCCGGGCGTGCAGGGCGCCGAACAGCCCGGTGTGCTTGACCTGGGAAAAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 117144-116444 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOE010000004.1 Streptomyces sp. CAI-24 NODE_4_length_245767_cov_492.751, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 117143 29 93.1 32 .....................G...T... GGGTACGGGACGTCCTCGGGCAGGTAGTCGTA 117082 29 93.1 32 .....................G...T... GCCGCCCAGAACGAGGCCGTGACCATGGAGAA 117021 29 93.1 32 .....................G...T... GACGTGACCGTGTCACGGCGCGGCGGCGGGTC 116960 29 100.0 32 ............................. GCACTGAACTCCATGATCATGCCGCGTTGGAA 116899 29 96.6 32 ...............A............. GTGACCGTCGGTACTACATATTCATATTGACT 116838 29 100.0 32 ............................. CGGCCAGGCCACGGAGGATTACGGACAGAGGG 116777 29 100.0 32 ............................. ACGCCGGACGGCCCCGTGGCCGGATCCGCCGA 116716 29 100.0 32 ............................. GTCCAGCGCGCGTGGAAGAAGGCGAAGAAAGG 116655 29 96.6 32 ....A........................ GGCTTCTAGTACCTCAACGACACGGTCAAGAA 116594 29 100.0 32 ............................. GGCGTCGCTCCACGTCGGAGCCCTCCTCCGGT 116533 29 96.6 32 .........................C... CCGGCATACGTCGAGGTGGGACGGAAGGTCGT 116472 29 82.8 0 ...............A.....CCCC.... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 96.0 32 GTGGTCCCCGCGCACGCGGGGATGGACCC # Left flank : GCTGCCAGAGGAGGAAATCGCCATCAAACTTGCCGGATTGCCCGGCTGGGCACGAGAAGGGGACGCGATCACCCGCACGTTTGGGATCCGCTACCACGGCGGCGTCGCGATGATCGTGAACGTCGCGGACGTCGAACGGCTCATCGGCCACCACGCGGACATCGACCTGCGCTGGGACCACGTGAGGTTCCGCATCACGACACACGACGCCGGACACCGCCTCACCACCGCCGACTTCGACCTGGCCGCCCGGATCGACCGCATCGCGACGGCACACGAAGCGCAACCGCACAACTCTTGATCACGGCACCCGCGTTGTACCCGCAATGTTCGGTGAACGGCCTTTCGGCGGTGAAGATGAGGCACTCTGGGCGTGCGGCCGGGAGAAGCCCCGTCCGCCGCATTCAGCCTCGGGACATATACAGAAAGGGGATATGTCCGCTTCTCTGGAAGCAAGTAAAAACATCCCCTCAGCCACCTAAACCCGCAGGTCACGAACT # Right flank : GATCCGGCTCTCCGCCACTGCCTGCCTCCGCCGGATTCGCGGTGGCCGGGCCTTCACCGTCGGCCTCTCGACGGTGAAGACCCGGCAAGTGGGTACGGTTGAACGGCAGTCGGCCGGCCAGGCCGGTCGGCCCGAAAGGTGAGCGAGCTAGAGGAACCGCCCCGTTCGCGGTGCTCGTCGTCGCCTTCGTCCAGTGCCCGTGCCGGTCACGCCTTCGTGAGATATTCCAAGAGACGGAAGTTGGCGTTGCTGCCGTTGCTGACGAACTCCAGGACACCCAGCTCGGTGCGGATGAGACCGGCCTCCTCCTCCAACTCGGCCAGCTTGTCCCAGTCGCCGGAGTCGTTGAAGCCGAGGAAGAGCCGACCGCCGTCGGTCAGGTGCCGGGGGCCGTCCACGAGGAAGGAGCGGTGGGAGACGTAGCCGGCGTCCATGATGGCCCGCTGCATGTAGTGGGTGTAGGTGAAGTTTTCCGGTGCCAGCAGGGCGTTGGAGTCCCA # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGATGGACCC # Alternate repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGACCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 126488-126337 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOE010000004.1 Streptomyces sp. CAI-24 NODE_4_length_245767_cov_492.751, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 126487 29 100.0 32 ............................. CTGATCAAGGTGTCGCGCGAGCTGGTCACCGA 126426 29 100.0 32 ............................. ACCCCGGTGATCGTGCGCCCGATCAGCTCCAG 126365 29 82.8 0 .....................A.AGC..A | ========== ====== ====== ====== ============================= ================================ ================== 3 29 94.3 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : ACCCCGAGCCTTTCCTCGACCACTACCAACTCCTGCTCCCCAGCGGGTGCTTCACCGAGCCACTGCTCCAGCCGCCCTTCCTCCTCCAGCAGATCCCACTGGTCCTCGTCCAGCAGGTCGGCCAGTTCCCGGTCGGAAGCCTCCTCTTTCATGTACCGCTCGTCGTACTGCTCCAGAAAGCGACGCCACTCCTCGGGCGTGGTCAGGACGTCAGTAACTTCACTGTCTTCAGGCTTGGTTGTCTCATCCATGCGACTCATGCTCGCAGGCGCCTATGACAACGCCCCCTGCCTCCGGGGCGGCGGACGGGCGACGGGAGCCGCACCGACTGCACGTGGCTGGCGCTCCTGTGCCACGCGCAGCACCGAGGAAGGGCAGAATCACTCCTGGGGTATTCGGCTCAAGCAGGGGCCCTTTCCCGAGACCGGAAGGATATGTCCGTTTCTCAAGAAGTAAGCCAAAACAGCCCCCCAGCCACATAAACCCGCAGGCCACGAACT # Right flank : GAAGCTCACAAGGCCCACAGGACCCGCCGTACCCGAATGAAGCCATCGGGCGTCGGCTGACGGCCTGCCATGCTTCCGTGCCGCCCACGACCCGAGCACCGAGCACCGAGCACCGAGCACACGTAACGCCGTCCTCCTCCGACTCGTTGTCGCGAGAGGCGAGAGACATGGGTGGTCGACGCCCGCGGAGCCCAGGAGGCTTGGGAATCATGATCGAAGAGGGCGGCCCCGGGGGATGCCCGGCATCGCGGGAGGAGCCGCGCGTCGCGCACTCCCGTACGCTGCGGTTCTGGCTCGATCCGGCGAATATCGCGGTGCGCCTCGGCCAAGCAGGCCCCGTCGCCCGGACGAAGGCCGGACCGGCGGTCGCCTTCCAGGTCAACGACCCGTCGCTGCTCAGAAAAGTCGGCTGCGGGGAGGACACCTTCCAGGCCTGGAGCGCGGACCCGTGCCTTCGGGACTTCACCGGGAACGGTTTCGCCGGATCCGAGGGGCAGGCC # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8434-9377 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOE010000070.1 Streptomyces sp. CAI-24 NODE_70_length_21561_cov_490.354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8434 29 100.0 32 ............................. CGCGCGTCCTGGACCGGCCGCACAGGGGACTC 8495 29 100.0 32 ............................. ACCGCGGTCATCCTCGGCCGTACGGTGCACCT 8556 29 100.0 32 ............................. GTCACCGACCTGGCGAGCGCCTTTGAGCTGGA 8617 29 100.0 32 ............................. ATTCCGGCCGAATTCTCCGATCCGTAGATGCC 8678 29 100.0 32 ............................. CCCTCCAGCAGGCGCAGGTAGGGCAGGCGGCC 8739 29 100.0 32 ............................. GCACCTGGATCATGGGTGCAGAGCTTGAAGTT 8800 29 100.0 32 ............................. CGGGACTTCCCTGCCCCGGTGGTGCCGAAGAC 8861 29 100.0 32 ............................. CCGTCGCCCTCGCCCAGGAGCTGCGGGGCGCC 8922 29 100.0 32 ............................. ACGACGCTGGCCCGTCAGCTTCTGGATCGACG 8983 29 100.0 32 ............................. TACCGGGCCGCGCGCGACATCCTGTGGCCTGC 9044 29 100.0 32 ............................. CCCTCCGAGGCCGGGGCCTGGCAGCAGTCGCT 9105 29 96.6 31 .T........................... GACACGTCCAGTGACTACCGCTACCACAACC 9165 29 89.7 32 ...A....T........A........... ATCCACTGCACGATCGTGACAGCGGCGGAGCC T [9167] 9227 29 86.2 32 .T......T........A..........A ACAGACCGCGCCGACGCGAGGCTGATCGCCTC 9288 29 89.7 32 .T......T........A........... GCTCCGCCGCCGCTGCCCTGTCGTTCGGCTAC 9349 29 89.7 0 ........T..A..........C...... | ========== ====== ====== ====== ============================= ================================ ================== 16 29 97.0 32 GGGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : ACCGAAGGACGTCTTCGCCCGCGCCCTGCACATGGCGGACCTCTTCGCGGACTCGAAGCAGGACTTCCCGGGGGCCGCCAGGATCATCGACCGGGTGCTGAACCTGAAGGACGAACAGCCGACTCCGGTGCAACGGTTGCGGCTACTGGTGTTGCGTGGGGACCTCGCGCAACGGCTGGGGGACGCGGAGGGGGCACGGGGGTGGCTGGAGGCGGCGGAAACGGTTCAACTCACCGCCGGGGAGGAGGCCTTGGCCCGCGATGCGCTGGCTCGACTGGAGGAGCTACGGGGGTGATGGAGCAACCGGTCGGCCGATGGGGGCTACCCCTCCAGGCTCGGCGGGGGCGCCCCCTTACGACTCTCTGCCGAACCAGTCGCCATGTGGACGGCTCACGAACCAACTGCGCCCGGCCGCCCGCTCTGTGATCATGTAGAGGTGAGCACGCAGCTTAAGGGTCAAGGACTGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGTG # Right flank : GGCGCTGATGCTCCTACCGGCGGCGTCGGCCGAACCGACACCCGAGTGGGTACTGACCCGCCACCAGCATTGGGCGACCGAATCCGCACGGCACGCACTGCCCTGAAGGTGTCGCAGGAGCGCCTGTGCGAACTCAGCGGAGTGGACCGGCAGGCGATCAATCGCATCGAGCTGGGCCGTCACGCCACCGCATCGACACGCTGTACCGCATCGCCCGGACACTGAGGGTCCCGCTGTCCGGCCTCGTACGCGAGTAGGGCACGGCCGCGCGCACGGCCATGCCCCCCTGTGGGCTATGTCCTCCTGGGCTGGATGATCGCGGCCGGGTCGCGGAGCCAGATGTGCTGGCCGCGGTCGGTCACAGTCATGCCGAACTGCTCGGCGTCCGGCAGGCCGGCCGACTCGTACTCCTGCCAGGCCTGCTCGATCTCGTCCCACAGGAGACCGGGCCCGTACTGCCATGCCTCCTCGCCGGTGGCGGCGGTGGCCGCGGCTCCGTC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 14214-17091 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANOE010000070.1 Streptomyces sp. CAI-24 NODE_70_length_21561_cov_490.354, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14214 29 100.0 32 ............................. ATGCAGGACGCCGACCATCTGTGGATGCGCGA 14275 29 100.0 32 ............................. TTGTCGTTCGCTGACCGGGTGCCCGAGTACCG 14336 29 100.0 32 ............................. GCATCCCTCTCCGCGCGCTCCCGTGCACCGTC 14397 29 100.0 32 ............................. CACCCGAGGGGCACCCCCACCCACCCCGTGAA 14458 29 100.0 32 ............................. ATGGGGATGGGGTACTGGCGGACATAGCCGAG 14519 29 100.0 32 ............................. TCGTCCCAGTCCGTGGTCTTCACACCAGCGTT 14580 29 100.0 32 ............................. TGATCTTCCGTCACGACGGAGCCTTCTGGCGG 14641 29 100.0 32 ............................. ATGACCGGCAGCGCACCCCAGCCCGACCAGCG 14702 29 100.0 32 ............................. AACCCGCAGCAGTCCCCGCCGGAGCCCGCCAA 14763 29 100.0 32 ............................. AGATACCCGCCGGTCTGCTGCTTGGAGGCGTG 14824 29 100.0 32 ............................. GACGGAGGCCAGGACGTTGACGCGTCGCTGCT 14885 29 100.0 32 ............................. GAGTCCGTTGGGTACTCGGCGGTCGGCGGCGT 14946 29 100.0 32 ............................. CTCAACGGCCCCACCGTCGCCCTGTCCCGCGC 15007 29 100.0 12 ............................. GCCGGTCTCGTC Deletion [15048] 15048 29 82.8 32 AC.AA...G.................... AAGACCACCCGGCAGATCACCACGTGGCAGGG A,G [15053,15055] 15111 29 100.0 32 ............................. CTCTGCATCCCTGCTCCGAGCACGATCGCGAA 15172 29 100.0 32 ............................. TTTTCCGTGGCCCCGCTCGTCCATGACTCGTG 15233 29 100.0 32 ............................. GCGGAGACGACCCCGGCGGCCGAGCCGGTCAC 15294 29 100.0 32 ............................. CGGGTCCCCCTCGGTCAGCGGATGCTGATCGC 15355 29 100.0 32 ............................. GTCGAACTCCTTCTTCGGGGCCTGGGGGTGGT 15416 29 100.0 32 ............................. TGGCCGGGCAGGTGGCTGGGGAGCAGATCCTC 15477 29 100.0 32 ............................. GCCGAGGCGAGGTCGCCACCTGGAGGGGTGAA 15538 29 100.0 32 ............................. GAACGCCTTGGACCCGGCATGTCCTGCGAGTG 15599 29 100.0 32 ............................. AGCCTGGTCATCGGTGTCGCGCTCGGCGCGCT 15660 29 100.0 32 ............................. CCGCCCGCGAGGGACGGCGACGCCTGCGCGAG 15721 29 100.0 32 ............................. TGGGCGGTGTAGGGGCCGTGGAGGGTGGCGCC 15782 29 100.0 32 ............................. GCGCGGGGCCTGGAACGAGTCTGGGAGGACTT 15843 29 100.0 32 ............................. GGCGGGGCGTCGTGCGGGGGGAATGGATGCGG 15904 29 100.0 32 ............................. TACTCGTGCCTTACGGCGGTGTACGCCAGAGC 15965 29 100.0 32 ............................. ATGCGCGGAACCTTCGCCGTCGCCAGCGGTCA 16026 29 100.0 32 ............................. CCGACCGGTGACGCCGTTCCCAGCGCCATCCG 16087 29 96.6 32 .............A............... GCGCCGCCCGCCTTCTCTCGTTGTCGTGGGGC 16148 29 100.0 32 ............................. GCTGGACCCATGCCCGTCACCGTCACCGACAC 16209 29 100.0 32 ............................. GAGGTCATCGCGCTCCCGGCCCAGGCCGTTTG 16270 29 100.0 32 ............................. TGGTCGGTATAGGTGTGACCGGTCCTCACCGC 16331 29 100.0 32 ............................. TTCATTGACCACCTTATTCCTCAGCTTGGCCC 16392 29 100.0 32 ............................. GGGCAGCCCCTGTTATCCCGGGTCGGGGGTGT 16453 29 100.0 32 ............................. TCACAAGCCCCTGAGCTTCGAGCGCCTTGTAG 16514 29 100.0 32 ............................. TGTTCGGACTCGACACGAAGTCTCTCGTCATC 16575 29 100.0 32 ............................. CACGAACTGTTCCGGAAGACGGGCTTCTCCGC 16636 29 100.0 32 ............................. GAGGAATCCCTCACGACCCGGGGCCTGAAGAT 16697 29 100.0 32 ............................. GTCTGGGTCTCGGCCGACGACACGACCGTTCG 16758 29 100.0 32 ............................. CTCATCGGCATCGGCGACCCGCTCCAGCTCCA 16819 29 100.0 32 ............................. CGATACCTCACTCGGTACGTCCCCACACGCTT 16880 29 100.0 32 ............................. GCGCCCCGGAAACTCCCGGCCGCGTCTACGTA 16941 29 100.0 32 ............................. TTGTCGCCTGTGATGGGGCGGAGAGCGCCGGT 17002 29 100.0 32 ............................. GCTTCCCCTTCGTCGTCGATGGCGGTGTTGCG 17063 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 48 29 99.6 32 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CCAATTTGGGCGCCCAGGAGGAGGATTCCAGAAGCCAGTTCACCGATCGCCTGTGGTGAACCAGCATCCGGGGGCCCGCCGTACCGACCCGTCCTGTCTCCGGGCGCGGCGGGGAAATCGGGCGCTTCGGCGGAGGCGGGGTCTTCGGCGGGTGGTCCGGGGCGTGATCCGACACATTGGCTCCAGGGGCGGCGGGGCGCCCATCGTATGGCCGCTCATCACGGCTCTTGCCCCCGATGAGCCGCCCCTTCACCCGTACAGATGGGGCTCCCCGTACAACTTGACGCGATTTTGCGCCAGGTTTAGCAGGCAGGAGGGGACGCGGGGGACGTAGGCGCATACCTGCACAGCGCCTTGCGGTATGCCAACGCAAAGCGCTGCCCGTGCAGCAAGACGTTTGCCGTCGCTGACTGTTCCAGCTCTGTCACCATGTCAGGGTGAGGACGGCAGGCATGAGTCAAGAATTGGCAAAGCCCCTATAAACCAGCAGGTCAGGAAGA # Right flank : GCGGCCCCAGGCCGAACGCGAATGTCATCGCTCTCCGGCAATACACAGCAGCCCGGCAGCACACAGTTGTGCTGGTGTTCAGGTAGATGCGCGGCGTGCCGCGCCGCGTGGGGTGAAGAAGCTCGCTGCGGCGATTCCGCTGGTGATGAGAAGCAGGGATGCGGTCGCTGCGATGGCAGATGGTGCTTGGTGCAGGGGCCAGGTCCATGGGTAGGGGCGGCCGCCGGGGGCGAGTCCGATGAGTGCGCAGAGGACGGGGACCAGGGTGACGGCCAGCGGGCCGTACAGGTGGCCGAGGAGTTGCTGGATGATGAGGCCGGTGCCGAGGTAGCCGACGAAGTTGCGTGCTGCGGCGAGGGCCATGGAGGAGTCTGCGACGCAGGTGGCGGCGAGTCCGATGGCGACGGCGATCAGCGCGGTTGTTGCCAGCATGCCCGCCCGGTAGTTGGTCACGGGGCGGACTGCGGTGGTGTCGTAGACGCGGGGAACCCTGTTCAGGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //