Array 1 2082255-2083703 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018620.1 Paenibacillus xylanexedens strain PAMC 22703 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================================================================== ================== 2082255 33 100.0 34 ................................. CCCCTTACGCCGCGCTGAATAGCTGTGCGATGTA 2082322 33 100.0 36 ................................. CCGGTAGGTCGAACTCTACCATGTCACCCGGTCTTA 2082391 33 100.0 35 ................................. AACCGGGATGTACTTTGCACGACACGGATCGGGCA 2082459 33 100.0 34 ................................. TGGTGGATCTACCCATGACTCTCAATGACCGCGA 2082526 33 100.0 34 ................................. CGCTCCTGGGGTAAAGGCCACAGCATCGGATCGG 2082593 33 100.0 35 ................................. TTCTGGGACATGTTCCTGTGGACCCAGGGTGTGAA 2082661 33 100.0 34 ................................. AATGATGTAAAGAAACTATCTGTGTCACCGCCGA 2082728 33 100.0 36 ................................. TGCCATGCATTATCCCTCCCCACCCATGTTCCCGAG 2082797 33 100.0 34 ................................. CGATTACCTTCGCGGCTCCTGCGCTTGATGTCGG 2082864 33 100.0 34 ................................. CGCGAACATGTCCCGTGCTTGTGTCAACACTTCC 2082931 33 100.0 35 ................................. ATGTGGGTGTATCCTCCCTTAGATGGTTTATTGGT 2082999 33 100.0 36 ................................. CTTACCCTGATCAGCACAGGGCAATCACAATTGGAG 2083068 33 100.0 35 ................................. ATTAATAGCTTGACCGATACACTTTCGCGGATTAA 2083136 33 100.0 39 ................................. TAGCATGGGCTTTTATGATTATGTTTAAGGGTGGTACAC 2083208 33 97.0 37 ..T.............................. CCGTCCCGGCACTCAGCGATGGCAAACACCTCGTCTC 2083278 33 100.0 35 ................................. AGATTGAAGCACGATAAAATCTGGATTTGTTCCAT 2083346 33 100.0 88 ................................. TGTTAAGGAAGGGCTTCAGAAGCTGTCTAGCGAGGTCGCACGCGTGGATTGAAATGGTCTCCCAAAATAGGAGGATATACAAGATATG 2083467 33 93.9 35 ......T..T....................... GTACTCATTTCGGGATCACCAGCTTCTGTCCCGGC G [2083486] 2083536 33 90.9 34 .........T.........A..C.......... CCTAAAAAGATTGATTTGGGTGGCCTGATTGGTA 2083603 33 84.8 35 ................C.C..A........GT. ACTCTTAATGATTTCAGGAAGTGGTTCGGGGAAGT 2083671 33 69.7 0 ...A....TTA......T.....T.C.G...TC | ========== ====== ====== ====== ================================= ======================================================================================== ================== 21 33 97.0 38 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : CAGTTCTTCTTTATTATCGAAAAAAGTATAGATCGTTCCCTTGCCCACATTGGCAAGTCTCGCAACCTGCTCCATCGTTGTGGCCTTGTAGCCAAACAGGGCAAAGGATTTTTCGGCAGAATCCATCACCTGTTGCCTTCGATCTATCGTTTTCATCACATATACACCTCCTTGTAGGTTGAAAGGATAATGGGTAAGGTAAACCCTATTTTTTTGACCGATTTACTATTATGGTCAGTTGGTCGTTAACAACTGTAGCACTTGAGCAGGGAAGGTGGATGTGATCTTTGTCATAAACGGATAGGACAGGTGCGAATGTGATGCTCACATGAAAACCCTGGGGGATTCGCACCTCAGAATTTGTCGAAATGGGCAAAATTGTTACCTTAAGGCAACATGTAGGCATAATTTGATTGAATAATGATATGGAAAGTCATAGAATAATAGTGAAAAAACGTGTTTTTGATGGGTCAAATCGTTAAAATACGTACTTTTTCGCT # Right flank : CAAAGTGCGTGAATTGAAATTGGAGGAGACAATGGATGTACCTGAACGTGGTACTTATATTCAGCGCTGTTGGTGTAGAGTTTCATGTATATTTTTTAAAAGAATTAGTGGGTTCAAAAATTCTGGTACACAGTATAGATAGACCATCTATTATTTTCGAGGTGATAGATGTGAGCTTGTCTTTTTAGATTACTGGACGCCCGATTTTGGGGAACATTGAACCTTAATGGAATTAAGAGAGGATCTTTTATTCAAAAGTTATAAGAAATGATATTATATGTGCTAAATCAGGATAATATAAATTACCATTTTTCAAAAAGTAATTATTGGAACTCGTGTAGCATGAACATCAAATTATCTTATTGGAAAGGAGCATCGGTTGTGGTTTTAAATATCGTAGATCAAAGTGAAATGTAGGCAAGTTAACTTCTATAAAGTAAATCTGCACAAACAAAACTCCTTTTTTCAAATTCACTAAAAAGAAAAGTATCTCGCATCGT # Questionable array : NO Score: 8.90 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:-0.20, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 2085475-2086230 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018620.1 Paenibacillus xylanexedens strain PAMC 22703 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 2085475 32 100.0 34 ................................ TGAATTGTCTCGACATACGTCCATGGCCTATGCA 2085541 32 100.0 33 ................................ CCTATCCGAACGTGTGTAGGGGTTTTGTTATCG 2085606 32 100.0 35 ................................ TCAGCTTCAGCTTGGATTCTCTTGGCATCAAGCAT 2085673 32 100.0 35 ................................ AGGAATACCGTAAATTGCTCCGCGATTCTATTTGC 2085740 32 100.0 33 ................................ GAAACTCGCCAACGTAAGTTGATTGCGAAAGAT 2085805 32 100.0 32 ................................ TTCTCGCTCACTGGCGGTTTGTATGTGACCAC 2085869 32 96.9 35 A............................... CAGCTTAGTGGTTTCGCGCTGGAGGTTCTGGAGAA 2085936 32 100.0 34 ................................ AAACCGCAGGCGATATTGCCTGACATTGATTTCA 2086002 32 100.0 35 ................................ GCTGTAGTACTCACGAGTCTTCTGAGCACCTGTTA 2086069 32 100.0 35 ................................ AAAAAGGCAACGTATGCAGCCGATCCCACTGGTAA 2086136 32 100.0 31 ................................ AATCCAAGCGCTTTTATGGGTTATGTGTTCA 2086199 32 84.4 0 ..........G.G.A...A......A...... | ========== ====== ====== ====== ================================ =================================== ================== 12 32 98.4 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TAATGGAGATACCGGAGGAATAATTCTTGCTGAGCACCCCCAAGGAAATGTAAAAGAACTGATAGAGTCAATCGTGGATAGATTGTGTGGAATGGATGCTTTGACATTTCTCACGGATGTCCTTTTGTGGACTCCAGAACGTGTTGATATGAACTTGAAGCTTGATCGATTTCACTAAGAAAATGATATTATATTAAGATACGATGGTCATAGTAGCATTATAGAATGAGATCAAATACATTGAATATTGTCTTTGGTTCTTTAGATGTCGATATATGAAAATAAACTTTCTAAAGTAACATAGATTAGACCTGTAAATAGCTCTATTTAATGGTGCGAATGTTAAGCTCACATAAAATCTCTAGTAGATTCGCACCTCGAAAATTGTCGATTAAGTTTTTACTGGATTATTTGTATTAAGATGAATTTATTATCATTTACTAAATGACAGAATAACGTTAAAAACATCTTTTTGAAACGACTATACGTTACTTTCTGCT # Right flank : TCTTTGTAGTAGCGTTGTTACAGGTACGGGTGTCTGATCGCACTCCGTATGGAATGCAAATCGAATCCCTAAAAAAGTCTTACCTTTCTCATGCTAAGCATGGATAAGTGGGTAGGACTTTTCTATTTCAGAGAAATAAAAAATATTAAGTATAGAAAAAATACTGAAAACTGAAATGTGCTATTAAATGCAGCATATTTTAAGATCTTTTGTTAAACAATAGATTTGACCTATGGTAGAAAAATCAATATAATGTTATTAATTGTAAAATAAGGAGGAAGGGTATGTCGAGGTATTATGATGGATACGGATTAGACTCGACTGTGACACTTCTCAGAATAGCTTATGGTCTTGACAACTGGAGAGAGGTCGTTAAGTTAGGTGAAACACTTTATGAAGAATCACTTCGTATATATAATTTACAAATGTTGACTAAAGAACAGGACATCGTTGAAATACATACGCAACGGGCAATAGTATATTACATTGGATACAGTCGT # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 2096144-2098404 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018620.1 Paenibacillus xylanexedens strain PAMC 22703 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 2096144 33 100.0 35 ................................. TTTCTCGTCGATGAGGGCCCCTGTGAACTCGCCCC 2096212 33 100.0 33 ................................. ATCTATATGGGAACAATCGTTCACGGGTCCGGA 2096278 33 100.0 34 ................................. CACCGCGAGTGTAGCCAGGACAAAAGCCGCCATC 2096345 33 100.0 35 ................................. AAACGATTCCTGGGGATGAACCCCGGACTATCGGC 2096413 33 100.0 35 ................................. ACGGCTGCGGGTTGTGTGTCAAACCGCGCCAGGTT 2096481 33 100.0 35 ................................. CGACCATGTACGATAGGAAACCTTCCGCAGGACTC 2096549 33 100.0 34 ................................. ACCCTTGGTTCCTGATCGTTAGACCAATGCTTGA 2096616 33 100.0 34 ................................. TTCGCGGGAGTGACCGTTGATTTATACGTCACCA 2096683 33 100.0 35 ................................. AACCTTCGGACCGTTAGGTTGCTGATCTCGGGGCA 2096751 33 100.0 33 ................................. AGCTTCGTACAGCGGGTTATACTCCGGTACAAT 2096817 33 100.0 34 ................................. GAAAGCATGGTGGTTACCTCACACCAACCAAACT 2096884 33 100.0 35 ................................. TTGCTTCTCCTAGATCTGTACCTCCGTAACCTTTC 2096952 33 100.0 36 ................................. AGTCTCAGCGTTGTAGTAGTCATCTCGATACAAAAA 2097021 33 100.0 36 ................................. AGTCTCAGCGTTGTAGTAGTCATCTCGATACAAAAA 2097090 33 100.0 34 ................................. GGATACGCCTACGGTAAGCTCCGGCAACCTCGAC 2097157 33 100.0 33 ................................. AACGTCAGCGGACGCGGTGTTTAACAATGGATG 2097223 33 100.0 34 ................................. ATCGCAGAATCACGCGAAGGTTGGCCGATAGCTT 2097290 33 100.0 36 ................................. CCTTTCTTGAACCGATCAGCAAGGCCAGCCCACTGG 2097359 33 100.0 34 ................................. TTCGATGGCGAACTTCAACGGGAGGACGTAAGAC 2097426 33 100.0 35 ................................. GTTAACCCGGCGATCTGATCAGCAAACCCACGTGC 2097494 33 100.0 34 ................................. ACACCACCCAATTCCCGGTTGCCCGCTATGGCCT 2097561 33 100.0 34 ................................. ATCGATAAACTTGGTTTGTTTGGCCGTCAATGCC 2097628 33 100.0 35 ................................. TATATCCAACGCCTTTGTTTCGGCTGAACACGATC 2097696 33 100.0 35 ................................. CCGCATTGGGCGACAAAGATTGCTGTGTTGGATTG 2097764 33 100.0 35 ................................. TTCCAACGCTTGCGGAAGTACTCCAGTGGCTGCCG 2097832 33 100.0 35 ................................. TGCGTCCTTAATGAACATGATCGTGAGTCGGATAA 2097900 33 100.0 34 ................................. TTAAGTGCGGCCTTTAATGGCGTGGCCTGCGTTT 2097967 33 100.0 35 ................................. GTCCATGATGTGAAACGGGATATCAACGTCCTTCA 2098035 33 100.0 35 ................................. TTGCGGACTCTCGTTAGCTGCCGCTTCTAGAACTA 2098103 33 100.0 34 ................................. CAGTAGTCAGAAGGGCTTTTTGCGAGTACATATT 2098170 33 97.0 33 ..................A.............. TACATGGAGTATGAGTGGATTCAAGATTAGGGG 2098236 33 84.8 35 .G......AC.....A........A........ AATGAGCTCGTAAGAGCTATGGACACGGCCCCCTC 2098304 33 90.9 35 .........C...C...T............... TAACCAAGGAGGCATATACAGATGGAGGGCATATT 2098372 33 81.8 0 ...C.....C..G......AT.......T.... | ========== ====== ====== ====== ================================= ==================================== ================== 34 33 98.7 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGATGTAAGCACGATAGATAGTGAAGGCCGTAGAAGACTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTACAAAACTCAGTGTTTGAATGTATACTGGATGCTGCCCAGTTTAGACGATTAAGATTCGAACTGGAAGAATTAATTGATAAGGATACAGATAGTCTTCGATTCTATAACTTAGGTGATAATTACAAAAGAAAAGTTCAACATGTGGGTGCCAAAGATTCCTATGATATGGGTGATCCGTTAATACTTTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGGAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATGATCGGAAATTTGTGATAACCGTTTTAAAGAAGTAGAACTATCGAAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : TATTTGCTCCGTCTATTGTAGCTGCATGGCTCCAGTATCTAATGGCGCTTCAATACCCATATCAACTTCACAGATGGCTGAGCTGTCTGTGTTTTTTTTATGGTAACGGACAGCACAATGGTTGCTACAGAAGTGTTGCTACCTGTTTTTTAGAAAGATCCAGAGATGCCGCTTGCATGAATGAAGTACACCAAGGAACACATTGGCCCAAATAACTGTTCCCTGTTCTTAGGTGTTTATTGAGTTGAATAGCTGATCGTAAAAAGCTCGTAACTATGTCTTAGTTGAATCCGTCTAATAGATTGAGGTGATTGAGAATGAAACCATTTAAATATTGGAGCCAGCGCTTGAGTATACTTTTTGTTCTAGTCATTATTGTTGGCTGTGGAACATCGAATAAGGGTGAAATAACATCCAAACCCCAGGAAACGATTACGAAAGAAGTTTCAAAGGAATCAACGAAGCGATGCCCGGGAACCCTTGAATGGATTGATTTTCTG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //