Array 1 45103-46643 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVD01000003.1 Ligilactobacillus salivarius strain FJSWX10_2 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45103 36 100.0 30 .................................... ATCGCAGATAGGGCTCACTATGGTTGATCT 45169 36 100.0 30 .................................... TCCCACAAATCGCTGATGAAGCAATGCAAG 45235 36 100.0 30 .................................... AATGAAAAGAGGTGTGTTTTATGAAGTTAA 45301 36 100.0 30 .................................... TAAGGCTGTCGTTAAGCTGTTTGATTGTAT 45367 36 100.0 30 .................................... AGTTACAATTACACAGATTGCCAAAGACTA 45433 36 100.0 31 .................................... TCAAACCCCAGTAAATGATGACCAGACTTCA 45500 36 100.0 30 .................................... TCGGTGGTGAGAAAAGTGTTGCTGCAATAT 45566 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 45632 36 100.0 30 .................................... AGTCCAAGTTTGCTAATCAGCATCGCTATT 45698 36 100.0 30 .................................... TCAATCCACACGTCATTGACGTCAAAATGT 45764 36 100.0 30 .................................... AGATTTGTTGTTTAGTGAACAGGTTTCTGC 45830 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 45896 36 100.0 30 .................................... AGCACGTTTGAACAAGTACGCTAAGCAACG 45962 36 100.0 30 .................................... GTATGCAAATCTATAATGCTGCTTATTATA 46028 36 100.0 30 .................................... CCTACTTCTTTTTTATTAATCGCATTATTG 46094 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 46160 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 46226 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 46292 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 46358 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [46391] 46424 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 46542 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 46608 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 23 36 97.6 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTAAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //