Array 1 177073-178388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQI010000001.1 Butyricicoccus sp. MSJd-7 MS-7_ctg0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 177073 33 100.0 34 ................................. CCAACGTAGCTGTCAAATTCAGACTTGCGTTCCA 177140 33 100.0 36 ................................. CTTCAAAGCGTTGGCTCTAGGGTCTTTCTTCTTCTT 177209 33 100.0 33 ................................. AGTCACGAACATCTCAACGATGATGTGATTGAA 177275 33 100.0 36 ................................. CGGTTTACGCGGCGGATGATGGATAACAGCTATTGG 177344 33 100.0 36 ................................. GTCCTTCCGGCTGTACAGCGTGATTTCCACCACGTC 177413 33 100.0 36 ................................. CATGTCGGTTAAAGAGCCGTCATACCAACTTAACCG 177482 33 100.0 33 ................................. CGGCTAGATATTGCCAGAGGTCAGTTAGCCTAC 177548 33 100.0 34 ................................. GTTTACGCGGCGGATGATGGATAACAGCTATTGG 177615 33 100.0 35 ................................. TTTTACAAAATCCATATGCGGCAACAGGTCATTGC 177683 33 100.0 34 ................................. TTTTTCAGTCACGGTTAATCACCCGACCCAGAGG 177750 33 100.0 34 ................................. GCTGACCAGCCAGTTCTTCGTGATTGATGATTTT 177817 33 100.0 32 ................................. GCCGATAAACTGGCAAAGGGCATCACAGCCCA 177882 33 100.0 34 ................................. GCTATTACAATTCCAATCTTTATCGTCAATAAAC 177949 33 100.0 36 ................................. AAAGGGCTATTTTTAAGGTTAAAAAGGTGTTTTTGA 178018 33 100.0 35 ................................. AGTTGCAAGCAACTCACAGACGTTTTTCAACGCCT 178086 33 100.0 34 ................................. AAGTTGATAATGACCCGCGCTGGTTGACGGTCAC 178153 33 100.0 34 ................................. ACGAATGGGAGGAAAAAGTACCGTTTGAAACCTC 178220 33 100.0 34 ................................. TCATTCATGCTTCGGTTAACGCGCTCGATATGGT 178287 33 97.0 36 ..................C.............. TTTATTGCATCTCAGAGTTCTTCTATGCTTTCGCAC 178356 33 90.9 0 ..............T...C.............A | ========== ====== ====== ====== ================================= ==================================== ================== 20 33 99.4 35 GAAACAACTTACGCCCCGTCAGGGGACGAAAAC # Left flank : ATCCGTGGCGGAAGCGATATTGTCCGCAATATAGACGACGTATGCCGGAGACTGCTTGGACAAACTAGCAGATTTCAAAGCATCTGCGTGATGATACCGAATGCAGTCGAGAATATCCGGCTGGTTCCAGACAGCTTTCAGCTTTTTATAACCGCTCTCGCTGTGCGAACCGCTTTCGCCGGCGCGGTACAGGATTTTTCCCAAATCGTGTACCAATGCACCGTAGACGGCATATAGCGTTTGATTGTGTTGCTCCATAATCTTCCCCCAATTCTCACAAATTTCATATGGACAGTCTAACACTTTTTGGACACCTTTTCAAGACGCGGTGCGAAGCAATCTGTATCTTTTTAGATTTTTTTACAGAAAAAAGAGGTTCGCACCGCGAAATATATAATTTTTTTCGAAAAAGTCACGAAATACATTGCATTTGCAAGAGATTTTCGATATACTGTAACAAGAATTGCTCCGGCAACATGCAGATTTTGTGCCCTTTTGCC # Right flank : AAGCTCCTTACCCATGTGGATAAGGAGCAGAAGGAGGTTGATACATATGAAACGTATTTTATTTAGCTGTGTTGGTTCGACCGATCCGGTGCGCGGTTTACGTGACGGCAGTATGCTGCACATTATGCGGCACTATCGACCGGACAAAGTTGTATTATATCTGTCTGCAGAAATTCGGGAAAAGGATGCAAAAGACCATCGGTTTCAGCGGGCATTTGACGATTTCGAACAGCGTGTGCCGGATTATCGGCCGGAAATCGTCCGCATAGAAAGCGATATACGTGATGTGTCGGATTTTGACTGTTTTTATGATGAATTTGGCAAATATATCCGTGAATTGCAAACAGCAGAACCGGATGCGGAAATCTTGTTAAATCTTAGCTCTGGCTCAGTCCAGATGAAAATGACGCTGGCGCTGCTGTCAGCAGATCTACGTTTTCGCACCAGAGGCATTCAGGTGAAAACACCAGAAAAAGCTGCCAGCAAGGCACAGCGCACAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAACAACTTACGCCCCGTCAGGGGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 228329-229490 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQI010000002.1 Butyricicoccus sp. MSJd-7 MS-7_ctg0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 228329 32 100.0 33 ................................ AACCGACTTAATACCATCCACAGTCATCAGCAG 228394 32 100.0 36 ................................ CATCACGTATGGCGTGTACCTCAACGAGTGTTATGT 228462 32 100.0 34 ................................ CACCCTCTGGCATCGTTGCAAGAGTCCAGTCCAA 228528 32 100.0 36 ................................ GAGTCCAGCCCAGAGTGCCAAGCCTGCACCAATCAA 228596 32 100.0 35 ................................ GACATTGTGCAGAACGCTTTGGACTTGACGGTAAT 228663 32 100.0 33 ................................ CTCTTTGTAGGTAAGATAAACGTAGGGCGCAAG 228728 32 100.0 35 ................................ GCCAAGATGATAAAAGCGGCACTGAAAGACTGACC 228795 32 100.0 36 ................................ GTAGGTTTCAATTCCCGCTCTTATGATGACTACATC 228863 32 100.0 34 ................................ TTGTCATGGTAAATCCCCTCTCTAATATCATAAC 228929 32 100.0 36 ................................ GTAGGTTTCAATTCCCGCTCTTATGATGACTACATC 228997 32 100.0 34 ................................ CGGAAGGATGGTGGATTAAAGAATATGAACAAAA 229063 32 100.0 35 ................................ CGACACTGTTTTGGTATTGGAAGGTGAATCAGTAC 229130 32 100.0 33 ................................ AATGTCCTAATGGACGATATAAAAGACGTAGGC 229195 32 100.0 33 ................................ CACGTTGCTCTCTACCGCATGTTTCAATGCCGT 229260 32 100.0 35 ................................ TCACCAAACCTTTTTTGGTAATTGACTCTAAGGTT 229327 32 100.0 36 ................................ AAGCAATCCGGAGAGTAGTTGTCCTCGCACAGCAGC 229395 32 100.0 33 ................................ TTGTGTCTACAGTAGATAAGATAGACATTAAAA 229460 30 87.5 0 ....................--.T.......C | T [229489] ========== ====== ====== ====== ================================ ==================================== ================== 18 32 99.3 35 GTTGCAATACGCATGTGAGTGCGGGTTGCCAG # Left flank : TCAATACGACCACATCACAGATACGTATACAAAAAAGTTACTGCGTCAGCGTTGGGCTGAATTAGGAAACGGAGACCGGATACAGCGCGATCTATATTCCGCTTTTCTCCTGATGAACAGCCAGCCATCTCTCCAGTCAACCGACCGAGAGCGATGCAGCAAAACCTATTCTCAATTCAAATCATTGCACGACCAAGAGATTTATCGTCTCCAGCAAACTCCCGAAAGACATTTAAGCAGTTTTGGCATCGCGTAAGTGCGAACGCCAATCACACATAAACACAATAGAATATTCGCACAAACTTCAGAAGGACAGGGCATGTCCTAACTTATGCATACACGTATTTTGGCTGACAAAATACGTAATAAGAAATGCTTTTCGGAACGATATTCAGTGCTCACTCGCCTTGATTTTTTCAAACCGAGTGAGAGAAGGTATCCATGTACGAAAAGCCCTGCATTTACGAACTCTGCGTGTTGTAGTATTGTGCATTTTTGCC # Right flank : CATTTAAAGATGTAAGTTTGCTCCGTGAGGACAAACGAAAACCCTCAGAGGCGCAATCTCCGAGGGTTTTCTATTCCATTTTTGCAAACACAGCAAAAAAGACAGTCGATTTCTCGACTGTCTCAAAACTTGGAGCGGATGACGAGGCTCGAACTCGCTACCTCCACCTTGGCAAGGTGGCGCTCTACCAGATGAGCTACATCCGCATATTTTGTTTTTCGTTTTCGTCTGTTCCCTGACGACGGTGTTTATTATACGCGAGAATTCCCCTTTTGTCAACAATATTTTGAAAGTTTTTTTAAAAAACTTTTTGAGCCGGAAAATGGCGCAGCTCCCCACTCCGAAGCTGCGCCTTGTTTATTCGTCGGAATCTAAAATCTGTAGGATTTGCTCCGGCCGATGCACGAGGACATCCGCGCCATATTTCAATAGCACCTCTTTGCTGCGGAATCCCCATGTCACGCCCACCGCATACAGACCGGCGTTTTTCGCCGTCTGCA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATACGCATGTGAGTGCGGGTTGCCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //