Array 1 79819-79181 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJZ01000010.1 Elstera cyanobacteriorum strain CGMCC 1.15802 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 79818 29 100.0 32 ............................. CAAAATTAGCTCGTGCCCGGCGCGATAAAAAG 79757 29 100.0 32 ............................. CGCCCGCAGCTTTCGGACCTACGCGAATCCGG 79696 29 100.0 32 ............................. AAGAACAGATCGGCTCGACTTACAGCAAGGCG 79635 29 100.0 32 ............................. AAGACTTGCTTATCGGTTCGGATTGAAAGCGA 79574 29 96.6 32 .............G............... GACGGCGATGTGCCGATTGTTTTCCCGACCAC 79513 29 100.0 32 ............................. TTTGGGGTTACGATTGCGCGGTTACAAGGCGA 79452 29 100.0 32 ............................. CTGATGAAATTCCCGCCGCGCTGCCCCAGGGC 79391 29 100.0 32 ............................. GTCGAACCGCCGCCGGAGGTGACGAAGGTTGA 79330 29 100.0 32 ............................. GCTGCCGAACTCGACTTCAATATCATGGTCAA 79269 29 96.6 32 .C........................... CGGGCGGGGCTGGACGGGCCGTGGCAGGAGGC 79208 28 93.1 0 .........................-..T | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.8 32 GTGTTCCCCGCACCTGCGGGGATGAACCG # Left flank : CTGTTGGAGCGGCTGATTCCCCTGATCGAAACCGTGCTGACCGCCGGTGAGATTGCCCCGCCCACCCCGCCCGAAGCGGCACAGCCTGCCGCCTTCGACGATCCGCCGGCGTCGGGCGATCTTGGGCATCGGGGTTAGCGCGATGGTGGTGATCATCGTCGAAAACGCGCCGCCCCGTCTCCGCGGTCGCTTGGCGGTTTGGTTGCTGGAAGTGCGGGCAGGCGTCTATATCGGTAGCTACTCCGCTCGCACCCGCGAACGCCTTTGGGCCGACGTGACCAGTATGATCGGCGACGGCAATGCCGTCATCGCCTGGGACGCCCCCACGGATGCCGGCTTCGCCTTCGATACTTGCGGGTCGAACCGACGAATTCCTGTCGATTTCGATGGCTTTACGCTTGTATCTTTTCTAGCCGAAGCGTCGCCCTCGGACGGGCGTTAACCTCGGTAAATTCTTTGACAATGTAAAACATAAGCAATTACAATTGCTTCTACGAAGA # Right flank : AGACCTCGATGAGGGTCGCCCCGACATCTACCGCGCGCCCACCGCGCGGGCAGGTGGGTTTGTCGTTGCCAGCCGTTCTGCAATCCCGAAAGATAGCGCCCGAAAGGGATGCAGAATGACCGAGACTTCTCGCCCGGCCAGCCCATCGGCGGGGCTGCGGGTTGTTGGCGATCTTATCCGCGATGTTTTGGTGGTCAGCGGCCCGCGTTTTTGGGGGATTGCCGTGCTGGCCAGCCTGCTTGCGCTAGTGCAGGGCGGTAGCCTGCTGCTGCTGCACCCGATCTTAACGCTGCTCGGCCTTACCGGCGCGCCGCCCAAACTCCCTTTCCTGGCAGCGGCGGGGCAGGCGCTTGGCCTATCGGGGGCGCTGGCGATCTATCTTGCCGTAGCCCTCGTCCTAGCAGGCTTGGTCTATGCCCATAGCCTCGCGGTGTTGCGCCTCGTGATCGACTATGGCGACTCGTTGCGGCGCCGCCTCTATGACGCTGTGATGGCGATGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 87040-86278 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJZ01000010.1 Elstera cyanobacteriorum strain CGMCC 1.15802 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 87039 29 96.6 32 A............................ AAGTTGTCCTCATGGTAGACCCGGATGAGGAC 86978 29 100.0 32 ............................. CTGCATTGGCGTCTGAGATCGCGCCGCAAGGA 86917 29 100.0 32 ............................. GAGCAGGTGGCGGCGCAACTGCTGGTCTACGG 86856 29 100.0 33 ............................. GCCAAAGCCTAACCACCTGCACCCCCGGCTTGC 86794 29 100.0 32 ............................. GCACGACGATGAGCGCGTTGATTATCGAGGCA 86733 29 100.0 32 ............................. CGCCTTTAGCCAAGCCTTCCAGGCCAGCCCCT 86672 29 100.0 32 ............................. CGCAGGGTGGTTTGCGCTGAGGCGGGCGGCAG 86611 29 100.0 32 ............................. AAGCAACAGGTCGATCCCGCCACCGGCGAAAC 86550 29 100.0 32 ............................. CAGAACCGTCCATTCGACATTGCTGCCCTCAA 86489 29 100.0 32 ............................. CTGAAATCCGCCACCGGCGAGACCATCCGCAA 86428 29 100.0 32 ............................. CTGCCCGTCGCCAATCTGCCCGCCGTGGCCCT 86367 29 100.0 32 ............................. ATTATGCCGGTCATTGGGCGGGAGCCGACCGA 86306 29 72.4 0 ...CC.......CCT.........TT..C | ========== ====== ====== ====== ============================= ================================= ================== 13 29 97.6 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : AACGGCTCGGCGGTATCAGCAAACAGGGGGACGGATATCTCCGCAAGCTGTTGGTCGTCGGTGCTACCGCAGTGATCCGCATGGCACGCAGGGATGCAACGCGCCAGCCTTGGGTCGCACAACTCCTTGAGCGCAAGCCAGTGAAAATCGCGACCGTCGGACTCGCTAATAAGACCGCGCGCATTGCCTGGGCGGTAATGACGCGCAACGAAGTCTACGCGGCAGCCGCCGCGTGACCGATGTCCTTGCCGTTTACTGAAGCGGCGGCAGGACGGTGTAAGGGCAGCTGAGTAGTGATGACAAACCGGTCAGACCGGGGATCGGACAAGCCCAGGGGAGCACGGCGCTTCGAGCGCGATGACGTGATTAGGGATCCGATCCGCGGACTTCATCAGGGCCAGCAGCCATGCGGTGCTGCGCGAACAGGCCGAACACATGGATGCACCCGACCGGTGCCTATCGCTCCACAAAAGCTCTTGCATCGCAGGGGCCGTCCACAC # Right flank : CTTGACGCTCGCTTCTACCCCTGCTTCCATTACTGGAATGCAGGGGTGGCGAGCGCCCGCCGAGTCCCCGAACAGGCAGTCGTGCAGGGTGCCTCTGCATGACTTCCCTATGATCCCCCCAAAACAAATTTCGCCTCCTTACGGGCTTGGGAGGCCGGGGGGAGCTGCTAACCTTTTGGGGTGATCCATCGCTGTGCCCGCGTCGGCCTCCAAGGACGGTGGCGCAGAGAGGGCGGGCGCGCGCCCTTATCATCGGGTATCGAGACAGATCTAAGGGGCGTTGACCGCACCTGCCTCCCGTTTTACGATAAAATCAAAATTAACCTCTTGCTTAGCGAGTTTTGCCTCGCTACGCTTTCTCTTATGGTTGCTCAACCCCATAATTTCTCCCTTATTTCAGAGGCTTGGCTGCCCTATCGCCGCCTGTCGGGGGAAAGGGGGTGGGCGCGGCCCGCGGAGGTTTTGGCGGCGTCGGAGGATCCGGTGGTTGCCGTGGCCTG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 88706-88433 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMJZ01000010.1 Elstera cyanobacteriorum strain CGMCC 1.15802 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 88705 29 100.0 32 ............................. CCTAAACCGCCCCCGATAAGCGCCGCGATTAG 88644 29 100.0 32 ............................. CTCAGATGCGCCCGGAGCGATTCCACGTCATG 88583 29 100.0 32 ............................. GCGAACGGCTTTGCGATATGGCGGCGGAAGAA 88522 29 100.0 32 ............................. GATCGGTTATCCTCGCGTACCGGCACGCGCAC 88461 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGTTCCCCGCAGACGCGGGGATGAACCG # Left flank : CAACGGCAATCTGCTCGATCCGCTGGCGGGCTATAGTCTCGGCAATAAGCCCTGGTCGAAGGAAGCGGATATCTCCACCCGCTTAACCCAGGAAACCAGCCGCGTCCGCCTTATGCGCTGGCAGGCGGGGGCCTTGCAGCCCTGGGCTGCGGCGGCAGACCCCGCCCACGCCTGGGCGCTGTCGGAACTGCGCGTTTCCCGCACCCGCCTCGCCGCCGCCCCGCCGCCGCCGGAGGTGCCCGCGGCGGCCCTGGCCGACCTGCGCGCCCGCTGGGGCCGCTATGATGCCGACTGCCTGCCGCTCCTCCTCTCCCCCAGCCCCGAAGCAGGCTTGTTCACCGCTACCGTCGCCGACGCACGCGGCCGCCTCGGCACCGCCTCCTACACCCCCACCCTCGGGTTGATCCTCCCCCGCGCTTGACTCGCGCAGAAAGGGTGTTAACCTCGGTAAATTCTTTGACATCGTAAAACCAAAGGAATTACAGAGAGTTCTAGGAAGA # Right flank : CGACGGAGCGAGGTCGACATCCAGCTCGAGACGTGATGTCGTGGACGACCCCTGCAGCAGCGTAGCTATGCAATGATGTGGTCGTTGAGCCACGTCTAGGAGTCGATCCATGCAGCAGGATATCGTGACCGTCGGTGTCGATCTGGCGAAGACTGTGTTTCAGATCCATGCGATCAGCGCTGAAGGGAAGGTTTTGGTCCGTCGGCAACTGCGGCGGGCCGAGGTTCTGAAGTTTTTCGCCGCTTTGCCTCCTTGCTTAGTCGGGATGGAAGCCTGTGCATCGGCCCATCATTGGGGCCGGGAAATACGCGCCCTCGGCCACGAAGTGCGGTTGATGCCGCCCGCTTATGTGAAACCATATGTGAAGCGTGGAAAGACAGATGCCGCTGACGCGGAGGCGATTTGCGAAGCGGTAACTCGGCCCACGATGCGCTTTGTGGCAATAAAGAGTGTTGAGCAACAGGCGGTGCTGATGCTGCACAAAACGCGCGATCTGCTCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //