Array 1 152-544 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFQL01000099.1 Micrococcus luteus strain M36 NODE_101_length_672_cov_389.842202, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 152 36 97.2 35 ..........T......................... GGCCTGACCGTGGACCAGCTCGTGGCCCTCAACGG 223 36 100.0 34 .................................... GTGAACCTCCGGCCGGCCCAGTCCGAGATGCCGA 293 36 97.2 36 .....................A.............. CCGCCCGACACGTTCGGCCCCGAGGACCACGTCCAG 365 36 100.0 36 .................................... GTCGCGAGCCTCTTCATCGTCTACGGCCTCGAGGGT 437 36 97.2 36 ..........T......................... CTCAGCGAGACGTTTTGGGACAGGAGGATGGGCTCG 509 36 91.7 0 ...............................AGC.. | ========== ====== ====== ====== ==================================== ==================================== ================== 6 36 97.2 36 GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Left flank : CGAGCAACGCGGGCAAACCAGATGGCCAGCACCGGGCAGTTCCCGTGGCCATCACTGGGCAGTCCTCATGGCCGTCAGCGGGTCATTCCCTGGCCACCTATGGGCAGCTTTTCATGGCCGCTTACACGGGGTCTGAATGTGGGTGTCCGTGG # Right flank : TCTAGGTGTTGTGGGTCATGAGGTTCTTGACATGGGTACCGGGCTGAGATGAGACGAGTGGGCCTCTCCCGCAGGATGGAAGTTCCTACACCACCCACCTGCCCGAAAAGACCCACTCATGACTCACG # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : GTCTCCGCTCTTTTGGGGAGCGGACTTCGTTGAGGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 53783-54176 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFQL01000008.1 Micrococcus luteus strain M36 NODE_8_length_67706_cov_351.428240, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 53783 28 100.0 33 ............................ TGACTGACCACCCCCTGACCGAAACCGCCGTTG 53844 28 100.0 33 ............................ CGGAGAGACCGATGACTGATCTCACCCCCAACC 53905 28 100.0 33 ............................ CGAAGCGTTCGGCCTGAAGCTGGCTCCCTCCGC 53966 28 96.4 33 ...G........................ CTGCTCCGCCGTGCCGACGGCGGCCTCGTCCGG 54027 28 96.4 32 ........A................... CACGAACGTGTTGCGCTCGCCCTCGTGGACCT 54087 28 85.7 33 ..GC......T.............C... CCAGATGGCGGCCTTGAATCGGATCGAATACCG A [54092] 54149 28 89.3 0 ......T....C.G.............. | ========== ====== ====== ====== ============================ ================================= ================== 7 28 95.4 33 GGAAGCCCCGCGCACGCAGGGATGAGCC # Left flank : GGCCGCCAAGTCCGGGTTGAACCGGGCGATCCTGGATGCCGGGCTGGGGATGCTGCGCCGGCAGCTGGACTACAAGACCTCCTGGGCAGGGTCCCAGGTGAAGATGATCGACCGATTCGCGCCCTCCTCGAAGGCGTGCTCGCGCTGCGGGACAGTCAAATCCACGCTGTCCCTGGCCGAGCGGACCTTCGAGTGCGAGGCCTGCCACCTGGTGATCGACCGCGACGTGAACGCCGCGATCAACATCCGGGCGTGGGCTGTGCAGGAGGAGCGTAGAGCAGGGGTCGAGCTCGCCCGAGGCCGTCGGGAGAGTCGAAACGGACGTGGAGCTGCTGTCTCGGGCCCGCCATCTGGCGGGGCCGCGGGGCAGGGGCGTGGAAGCGTCAAGCCCGCACCCCAGGGTGTGGGCATGTCCAGCCGGGCAACTGGCTGGTCATCCCAACCCCCCTCAACCGAAGGGGAAAGCGCAGAGCGCGGAGCATCCGCCCTGGCCAGGTAGT # Right flank : CAGACTCCCAGGGGCATTCACGGCTCCTGGGTTGAGCTGTCGTAGGGATCTGGGCTGGTCCCCGGTCCTTCCTAGACGCCAGCCAGTGCTCGTGACAGCTGCGGGTGTCGTGGAGGTGCTGCGGGGACGTGTCGCGGTGTCCGCGGGATGCTCAGCTGGTGGGCTCGGGGACGGTGGCCTCGCACTGGACCATGGGCATGCCCTTGGGGTCGCCGGTCTGGGCGTCCAGGGGGGCGGTGGTGCCGTCGGCGATGATCTCGCAGTGCAGGTCGCCGGCGGCGGGCAGCTGCGGGACGTTGGCGATCACCTGGATCTTTTCACCGGGCTTGGCCTGGGTGCGCAGGGTCAGGGGGGTGGTGCCGGCGGGCTCGGCGGGGATGGTCTCGTTGGTGTGGGTGTCCGCGCCGGTGCCGCCCACGAAGAGGTTCACGCCGCCGCGGGCTGCCGTGGTGGTGGTGCCGTCGCGGGGGATCCACTGGATGCGGATCTGCACGTCCATG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAGCCCCGCGCACGCAGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 12119-13440 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFQL01000058.1 Micrococcus luteus strain M36 NODE_58_length_13587_cov_422.176226, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 12119 36 100.0 38 .................................... TCCGGCGAGTCGGAGGGGATGCCGGAGGTTGCACCCTT 12193 36 100.0 35 .................................... GAGAGCGTGGCCCCGCCGCCCGCCGGGTTCACCGC 12264 36 94.4 36 ..T...........................C..... AGCACGGCGAGGGCCCGACCAAACCGAGACTTCCCC 12336 36 100.0 35 .................................... TTCGTCGAGACGACGGCGGAGGACGCCGAGGGTGT 12407 36 100.0 37 .................................... GCGAGGCCGGTGGGGGTGACGCTCAGATGAGGGCGAA 12480 36 100.0 35 .................................... TCACTGGCAGGGCCGGCCGATGCTTGAGACCTCGA 12551 36 100.0 33 .................................... TTCGCGGGCGTAGCGGAGGGTGTTTGTGTGTCG 12620 36 97.2 36 ............................A....... CCGGTCGAGGTCCGGTACACGCCCCCGGAGGGTGTG 12692 36 97.2 37 .............A...................... CCCGTCACCGAGGCCCAGCTCCGTGCCCTGATCCGTC 12765 36 100.0 35 .................................... GACCCCGTCGCGAAGCCTGCCCGGGTGGACGGTGT 12836 36 97.2 35 .....T.............................. GCGTCCAGGTGGTCGCTCAGCTCCGAGCGGGCCAT 12907 36 97.2 34 ..............C..................... ACCACCCCGAACTGTGGCCAGTGCGCCATGACCA 12977 36 97.2 34 ..............C..................... AACAGGTCATCCAGCTCCACGACGCTGACCAGGT 13047 36 97.2 35 ..............T..................... CGGGTTGGGGGAGAAAGTTCCTTCCACAGCCTGCG 13118 36 100.0 37 .................................... ATCTCACGCGCGGGGATAGTGGCGTGGAATCGGGGCA 13191 36 100.0 36 .................................... CCGGTCGAGGTCCGGTACACGCCCCCGGAGGGTGTG 13263 36 100.0 34 .................................... GCTGAACCCGCGCGGTCGCAGGCCCATCCCCCCT 13333 36 97.2 36 .....T.............................. CCGGTCGAGGTCCGGTACACGCCCCCGGAGGGTGTG 13405 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 98.7 36 GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Left flank : GTTGAGTGCCCGGGATCGTCTCAGGAGGCGGCTCATCGCCTATGACATTCCTGACGACCGCCGCAGATCACGGGCGGCCCGCGTCCTCGAAGGTTACGGAGATAGAGTCCAATATTCAGTCTTCGTGGTGGATGCCTTGCCCGCCCAGTTCGTCTCCCTCCAGGCAGCCCTCGAGGCGGTGCTGGATCCGGGCGAGGACAGCGTGCTGGTCTGCGACCTCGGCCTGACGGCCACGCTTGGCGCAGAGCAGTTCAGCTTTCTGGGTCGATCACGCGAGATCACTGTGGATGGGCCCATCATCATCTGAAGCAAGCCAGGGACCTTCGCGAGGGCTCCGTCGATGTCCGGAATTCGGCGAGCCGTCGTATCAGAAAAGGGCTTGTCAGCCCACGGTTTATGGGCCGAGGCCGATAAGCAGGGCGCTCCACGGACGCCTCTTGAGCCCAGGGCTCGCCGAAGGCCGCGTCTGCCCATGTCAAAGGGCTGTAATCTGAGGTGCG # Right flank : ATTCCGTGGCCGGACGGGGTTGTCAAGGGCCATTGAGTTCTGCCCATAGGCGGCCAGTGTTTCTTCCCGCTGGTGGCCATCAGAACTGCCCACTGGTGGCCAGCTGGTTTGCCCGTTTGGGTGGTGGTGCTGGCCACCGTGATGGGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTTTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //