Array 1 10278-9230 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQK01000082.1 Pseudomonas aeruginosa MW3a Contig84, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10277 28 100.0 32 ............................ AACGGACCGATGCCATCGTCGGCACGCTCGTA 10217 28 100.0 32 ............................ TTAAGCCACGCGTCCAGATGGCGCAGGCAAGG 10157 28 100.0 32 ............................ TTTGCCCAGGCGTGCGCGGGATGAACTGGAAC 10097 28 100.0 32 ............................ TGGGGCGGTTTGGTGTTCTTGCGACTCTCTTC 10037 28 100.0 32 ............................ TTCGAACTGCCAGATTTGCTCGCGTGCGTTCT 9977 28 100.0 32 ............................ TTGACCACGGGCGAGACTTACGCCGAAATCAG 9917 28 100.0 32 ............................ TCATGGGCTGGGCGGCGAACGTCCTCGCGCAT 9857 28 100.0 32 ............................ TCTACGTCCGCCAATTCTCTTGGCCCGTTCGC 9797 28 100.0 32 ............................ TGGGTGGCCGACATCGTTGCGTCGAACTCGTA 9737 28 100.0 32 ............................ GCATGCTGTCCGGCCTGTTGATCGGCCCGCTG 9677 28 100.0 32 ............................ GCAACGCCGGCCGAAGACCAGACCATCACCGA 9617 28 100.0 32 ............................ TTCACCGTCACCCAGTCCTGGGTGGCGTAGAC 9557 28 100.0 32 ............................ TTGGCAGCTGTAGCCAGAGCCGGATGCGAAGC 9497 28 100.0 32 ............................ AGAGCGCTCTGGTGGACGGCTGGGTACGACGA 9437 28 100.0 32 ............................ CGTATCAGCGGGCCGCCAATGAAACCGTCGAG 9377 28 100.0 32 ............................ AAGAAGATGAACCGCGACGACCACCGATAGGA 9317 28 100.0 32 ............................ AACGCCCAGCGCCAGCGGGAGAAACGCCAGCG 9257 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCTTCTAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCAGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //