Array 1 62976-64506 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNLO01000043.1 Vibrio parahaemolyticus strain C3_5 C3_5_contig043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 62976 28 100.0 32 ............................ AGCACAATGAACTCGGCCAACATCAACATAAA 63036 28 100.0 32 ............................ TTGGGTTGCTAATGAGCGTGCTCGTGCTCGTT 63096 28 100.0 32 ............................ AAAAAGCGGGTCACGAGCATCAAACGGCAAGA 63156 28 100.0 32 ............................ AGAATTGGAAAAATTATGGACGTTTGGAAACT 63216 28 100.0 32 ............................ TTTTTAGGGGATAGATATGTGCGCAGACGTTT 63276 28 100.0 33 ............................ GCCACGTGATAGGGTTCGGGGCGCGTTCCCTTT 63337 28 100.0 32 ............................ ATTAACAGCCGTTGTCTCGAGCGCGATCTTTT 63397 28 100.0 32 ............................ AATTAAAGCAGCAACTTGAAAACAAAGAAGAC 63457 28 100.0 32 ............................ TAAAAATGAAGTTGTAACAGGGACGCCAACAA 63517 28 100.0 32 ............................ GTGAAAAGCCGCTTAAATCATTCCAAGGCAAA 63577 28 100.0 32 ............................ GCACGCAAAATATCTAACCTTTTTTGGGGATA 63637 28 100.0 32 ............................ ACCAGCATATTCGCTCAAATCTGGTATTTGCC 63697 28 100.0 32 ............................ ACTCGCCACCGAATACAAAAAAGCTTCAACAG 63757 28 100.0 32 ............................ ACTCAAGCAAATTGTTGTACATGTAAGCGCGC 63817 28 100.0 32 ............................ TTTTCGGAATCATCAATACCAAGTGTAGCTTT 63877 28 100.0 32 ............................ TCTTCTTCCTGGCCAAGTAAACGACACCGGCG 63937 28 100.0 32 ............................ GTATCGTTTACTTTGGGATAATTGGGAACGCT 63997 28 100.0 32 ............................ TATTTTAATCAACGGCTCCCCTATCGGAATAA 64057 28 100.0 32 ............................ ACTCTGGGCGTTTATGAATCATTGCCAAAACA 64117 28 100.0 32 ............................ TACCGGAGATGGACAAACTTTCCGACGCTTCC 64177 28 100.0 32 ............................ AGATAACGATAAAGCAGGCTGGGAAGTCGTTC 64237 28 100.0 34 ............................ ATCATCGATTAGCGTTGAGCGCTATGTTGATTCA 64299 28 100.0 32 ............................ TGTCACAGCCACGAGCGCGTCCCTGGTTAACT 64359 28 96.4 32 .............C.............. TTTAATCGCTGAATCGGCGGGGTTAGTAATCT 64419 28 89.3 32 ...A......A..C.............. GCCACGCGATACAGTGAGAACAACGGCCAATC 64479 28 85.7 0 ...A......A..C............G. | ========== ====== ====== ====== ============================ ================================== ================== 26 28 98.9 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTTCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : AGGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAATCCATAATTATTCATGTTTAATTTAATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATTGCTTGGAAATAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //