Array 1 55252-54751 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDNE01000086.1 Enterococcus faecium strain KACC15960 Contig00086, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 55251 36 100.0 30 .................................... TTTTTCATGCCATCAGTATGTCGTTGATGC 55185 36 100.0 30 .................................... CGTCATGTTCTACTACTACAGCACGTCCTT 55119 36 100.0 30 .................................... ACATGGTTAAGTTGTATAGCGGAGTAACTG 55053 36 100.0 30 .................................... ATGGAAGCATTAGTGTTGATCGATTTCGCC 54987 36 100.0 30 .................................... AAAAAATCGCTGGTAAGCTAGAAACTAGAG 54921 36 100.0 30 .................................... TGCTTTTATGTCTTTGCCTTCTTTAAACTG 54855 36 97.2 30 ..................................G. ATCTTTTTCCTACGATTTCTTTACCTGAAG 54789 36 91.7 0 .........................A....T....A | G,CA [54754,54759] ========== ====== ====== ====== ==================================== ============================== ================== 8 36 98.6 30 GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC # Left flank : GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATTGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATAAGCGAAGTGCAAGATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTATGAAACATTGACGGAAAAATTTTTTCTGCGAG # Right flank : ACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGGTGTTTTTCATATGAGTGGACGGAATTATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //