Array 1 1370182-1373799 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBWE01000001.1 Desulfofundulus salinum strain 435 Scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1370182 30 100.0 36 .............................. ATGCGCTCGATGAGCTTCTGCCAGCCCTCTTTGTTT 1370248 30 100.0 36 .............................. AAGAAGGCTACGACCTGATTTATCGGCCTCCCCGTG 1370314 30 100.0 37 .............................. TCAACTTGCGGCACTCCAGTCCCTCTTCCTCGGTTAT 1370381 30 100.0 37 .............................. ACCCCTACTCTGCAGCGCACTTCCAGGGGGTATCTCC 1370448 30 100.0 36 .............................. TCAAGTTCGATTCACCCGTACTGTGCTCCCCCGAAG 1370514 30 100.0 36 .............................. TCAGGTACTTCGTCAGGAAACTGGAATTCGACCCGA 1370580 30 100.0 37 .............................. AAGCCGCCCGGCAGGCGGCAAAGCGAAGGCCCCTTGC 1370647 30 100.0 36 .............................. CCTTGCTACTCACTATCGCAGCGGCTGGGCTTTGTA 1370713 30 100.0 36 .............................. TGTGTGTCCACACGCGCATACTGCGCGGCAAGTTTC 1370779 30 100.0 38 .............................. CCAACACCAGTTTAGCACGTGGTGATTGAGTATGCAAG 1370847 30 100.0 35 .............................. CGGGTAGAAATTGAGGAAGATACTTTGCTAAAGGA 1370912 30 100.0 35 .............................. ACTTCCAGCACTACCGTTGTTCTAGCCATCAACGA 1370977 30 100.0 36 .............................. GTCTCAGTGTAAAAAGCCTGGCGTGCTTCCTTATAG 1371043 30 100.0 36 .............................. CCGATCCAGTAGCTTTTTGCAGTTAGTCCGTTGCCG 1371109 30 100.0 35 .............................. AGAGTTTAGCCGACATGAATGCGGTGGCTGCTTCG 1371174 30 100.0 37 .............................. TAAGGATTAGAGAGTATAGACCGGGTTCGTTAATCAA 1371241 30 100.0 38 .............................. CGGCCTACCTGCATTTTGTCGAATGTTACCACGTTTGC 1371309 30 100.0 36 .............................. TCAAACTTGTTTAGAAACTCATTCTTGCCGCTATAA 1371375 30 100.0 35 .............................. GTATTTTATCGCCTCCCGCTCGGCGTTCCAGGTGC 1371440 30 100.0 37 .............................. ACCCTCACCTGATACTCCCACCAGACTGCCTCCTTCC 1371507 30 100.0 36 .............................. GTTGTATCAATCCATTCAACAAAACTGCTTTCAGTC 1371573 30 100.0 36 .............................. TCGCCTCCCGCTCCAACAACCACAGCAAGGCTTTAC 1371639 30 100.0 39 .............................. ATAGGTAAAAATCACAATCTGTACGCCTACTGCCGGGAG 1371708 30 100.0 36 .............................. CTACAACGGCTGGGGCTTCGTGTTCGACATGGACTA 1371774 30 100.0 36 .............................. ATAACTGCCCGGGATTTAGCTGCCCCCGTCGTATCA 1371840 30 100.0 36 .............................. TGCGGCATTACCTGACGGGTGACGTGGCCGCGCTGA 1371906 30 100.0 36 .............................. AGCGCCCCCGCCTCCTGGCTGCGGGCCGGGGCGACC 1371972 30 100.0 37 .............................. GCCGGTGACTCCCTTGATGATGCCGTGCGCCTTCTCA 1372039 30 100.0 37 .............................. CTCCACCGGTAACGGGTTTTTTACAGAGGGCGATCCA 1372106 30 100.0 39 .............................. CCGCTGCATCGGCAGGGAACACGGGTTCAACTGCAGGAA 1372175 30 100.0 36 .............................. TTACGTAGGGATTGTCTTTGCTCTTCTGTATGCGGA 1372241 30 100.0 37 .............................. TGATGCAAGGGATAGCAGGCATTGCGATGCTAGGTGC 1372308 30 100.0 36 .............................. AAATTAACATGGCTAAGTTCGTGGTCAATTTGACCA 1372374 30 100.0 37 .............................. GACAAATACCGCAAGACCCGGAAAATTCAGGCTTCGA 1372441 30 100.0 36 .............................. TAGCTTTCTTTTCTTCCCTCTCCGCCCGCCGGATGA 1372507 30 100.0 39 .............................. TGATTCCTGCCGATAAGACATTTGCAAACCGCATTCTTC 1372576 30 100.0 36 .............................. CCTGAAGACGCAGGTAAACAAACTCCTGGTGCAGAC 1372642 30 100.0 35 .............................. TCGAATCAACTGTCCTGGAGTCATTTCCATCGCCT 1372707 30 100.0 35 .............................. CAAGTTTTTGCGCCGCATTGAGTACCGCCGCGTAC 1372772 30 100.0 37 .............................. ATCTGATACAGGCAGGCAGTGTGCGATTTGCCTTTTC 1372839 30 100.0 37 .............................. CTGGAGGACAAGATTAACTCCCGCTTCAAACTAGCAC 1372906 30 100.0 36 .............................. TTGTTTGGCGGTAGGAGCTTTTCTTATCAGATATTC 1372972 30 100.0 36 .............................. AACATACCAGCAATCACCTCTCTTGCGACATCTGCC 1373038 30 100.0 37 .............................. TTGGAGGGGACAAACGGCACCTGTGGGAAGTCAAGAA 1373105 30 100.0 35 .............................. CTGGGCTACGTCGCGGCTGAGGCCGCCGTTGACGC 1373170 30 100.0 36 .............................. TCGGCGATTTCTCCGGCCTGTCTCAACTGTTCTTCT 1373236 30 100.0 36 .............................. CTTTGAGAAAGAATATATGTTTCCCGAGCAGTGGAA 1373302 30 100.0 37 .............................. TCAGATAACAGTACCGGCGGGCGACCAGGGCACAGAC 1373369 30 96.7 36 ........A..................... CCTCAAGGACCTGGCCGGCCGGGAGGACTACAAGCC 1373435 30 96.7 37 ...T.......................... CTGATGACCTCGTCGTAGGCCTCGCCGTTCCGGTACC 1373502 30 100.0 36 .............................. TCCTCACGCCCCTAATATCAACACTACCATCATTCC 1373568 30 100.0 37 .............................. TCCGCTACTTCGTGGGCGTGGATTATGGTACCAATAA 1373635 30 100.0 38 .............................. ACGGCATTCTTGCCGCCGAGTGGATGCGGCGGCATTAC 1373703 30 96.7 37 .............................C AACCATGCGGAATATGCTTCAGCCTGAAGGGAGGTCA 1373770 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ======================================= ================== 55 30 99.8 36 GTTCGGAGCCTACCTATGAGGGATTGAAAT # Left flank : TTCGCCCCGAAATGTTTTGGGGCTGAATGGTGCATGGTGTTAGAATGGTGGTGTGCAACATTGTTCATCATTCTAGTCTATGATGTTAACGTGAAGAGAGTAAGCAAAGTCCTTAAAACATGCCGCAAATACTTGCATTGGGTGCAAAACTCTGTCCTGGAAGGAGAAATTTCCGAGGCAAACCTGAAAAAGCTGAGAATGGAATTAAACCGTCTTATCGACAAAGAGGAAGATTCGGTAATCATTTATAACCTGAGAACCACAAGATACTCTACCAGGGAAATTTTGGGACTAAAAAAGGGAGGGGAAGAACAAATAATTTAGGCATAGACGGCTCTTTTTTTTGTCGTCGACCTTCGATAGAGTAAAAAACCTGGGAGGTCGACGACAAATTTTTTCACGGAACGCCCGGAATACCCTTGATCTGGAGCATGAAAGTAGTAAAATAATAGCTAGCGAAGGGCAAATAAAAATTGCCCAACTTTTGCGGCATCCAAGTG # Right flank : CATGTTAACTTTGGAGTAAATGTAAGCGTAAAATAAACCCCACCTTGCAATCAGGTGGGGACATAATCTGGCTTATTTATTAACCCTGCACACAGGGGGCAGCGAATCGGACCAGGGGAGTAACTGATCCAGGGCGTTACTGTCTTTAGGGTCCAGGTTGGGAAGTTTTTCAAAACCACGTCAAAAAGCAAAAAGAACTCGACGATAACTCGCCCACCAAAAACGACCGGAAAGACGCCCTGATCATCGCCACTTTAACCTGGGAAGGACGCTTTTTCCACTGCTATCTACCCAAAGGGATCTGGGCGGAACTCCGGGGGTACACCCAAAACCGCCACCAGCAAAAGGCCAAACTAAACGCCGCCCAGAACAACCTGGTGGCGATCCTGGACGAGCGCTTTCCCGAATATCCGCAGGTTTTTAAGAACCTTCTAGGGAAAGCCTCCCTGTACATCCTGACCCACCGGCCCTTCCCGGCCGACCTAAAACAGCTCACGACA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGGAGCCTACCTATGAGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 1375450-1375941 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBWE01000001.1 Desulfofundulus salinum strain 435 Scaffold_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1375450 30 100.0 37 .............................. AACCATGCGGAATATGCTTCAGCCTGAAGGGAGGTCA 1375517 30 100.0 35 .............................. CCGTTAACCAGGTAAATCTTCCCGCTGCCGTCCTC 1375582 30 100.0 35 .............................. TCGTTTTACACCGCCGGTGTCCTCCCAGTAGACTG 1375647 30 100.0 38 .............................. GGATATTCCTTCCAATCCTTTACCGCCTGTAAAATAAT 1375715 30 100.0 35 .............................. GCTTCACCTACTTGGAATACAGAACCAGCCATTTA 1375780 30 96.7 36 .............T................ GTACTCCAGTCAACTGCTGTATCCTCTCCCAAGACC 1375846 30 100.0 36 .............................. CAGCACCACCTAACAGTAAGTTATGCTACTACCGCA 1375912 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 99.6 36 GTTCGGAGCCTACCTATGAGGGATTGAAAC # Left flank : GCTTGTGGATATGCCGCTCGTGTGGACTTGCGGGAGGCCTCCTGCCACTTAAGAGGAGCCTGGAGGTTTAGGCATGGTTTATCTTCCGCCTGTCCACAGGGTCCACACTCGCTTGGACAAAGCTAAAGCGTTGCCCACATATCCACAAGCCCGACGGCGTAAAGGAATCATCATGAGGCAAAAATCTTGGGTGGGGGAAACCGAAAAAACTTCCATTAGGGCATGACCCTGCTTCTGAGTAACGGTGCCCCACCCGCCCCCATTATGCTGAACGAAGGAATGTAAGGGCTTTTGACCCCGGGAGACATGATAGGGTAAGCAGGGGGCGAGCAGGTGGGTTAGACCACCCAAGATAAATTTTTTAAAAATGGCAGATAGAGTGAGCTTTTTAGAGCATCAATGAAAAATATTGAGATAGGAAGATTATCCCTTAAACTTGGGTATTATGCCAAGGTGGGTTGTGTTTGACGCTTACGAGTAAATCCTAAAGCGGAGATGGA # Right flank : CTGCGTACTATTTAGCCCCCTAATCCGGTTGGAGAATCTGTGTTAAGGTTGTACAATCAGGTTAGGGGGGTTGAACACCCATGAAACGTTACAGCGACGAATTCAAAGAGCAAATCCTTGAGGAGTGCAGCCAAGTAGGGAATATCGCTCTGGTTGCTAGACGCCACAACATTTCTAAAAGCACCATCCACAGCTGGATAAAGGCGCATCGGAAGAACGGTTCCGTTAAGCCCCTCCCCAAGGTCCTGGACAAGCGGATCAACGAACTTGAGAAGAGGCTTGAAGAAGTCAGCACCGAGAACGAGCGACTCAAACGGCTGGTGGCAGAGAAAGAACTTGAGTTGGCCATTCTTAGGGACCTCAGGAACAGGGTAAACCCTCGGTAGCCGACAAAGTCGTCATAGCAAATAAGTGGATTAACAAGGGTTACAGCACAAGCCGGGTCCTCGGCTTTGTCGGCTTGGCTCCATCCACCTACTACGAGTTCATGTCCAGACAGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGGAGCCTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA //