Array 1 58724-57475 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHVGH010000019.1 Escherichia coli strain P31-11 NODE_19_length_95017_cov_57.153012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 58723 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 58662 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 58601 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 58540 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 58479 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 58418 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 58357 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 58296 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 58235 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 58174 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 58113 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 58052 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 57991 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 57930 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 57869 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 57808 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 57747 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 57686 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 57625 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 57564 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 57503 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //