Array 1 9182-7297 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQBX01000020.1 Pediococcus stilesii strain DSM 18001 Scaffold20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 9181 36 100.0 30 .................................... GTAGTGTGCTGATGTATTGGCAGGCGCACC 9115 36 100.0 30 .................................... TGAAAGCTAAGTCGATTACAGCCGATAAGC 9049 36 100.0 30 .................................... GAAACATTGATAATATCGAGCATTTAACAG 8983 36 100.0 30 .................................... GTGCCAATCATCTGTTTAACTAGATAATCA 8917 36 100.0 30 .................................... CGACTGATAAGGTTGATTTAAGTAGTGGTA 8851 36 100.0 30 .................................... AAACAAATCTTATCCATGGAATCCGATCGT 8785 36 100.0 31 .................................... GTTAGCACAAGCCGGTTATATCGTTTTTAGA 8718 36 100.0 30 .................................... ATATAATCATGACAACTACAACCAACTATA 8652 36 100.0 30 .................................... GGACCGGCTAGTAATATGGGGTCTGCATTT 8586 36 100.0 30 .................................... CGCTTTGGAGTGAGGTTACCGATGAGGGCA 8520 36 100.0 30 .................................... ACTAGTCATGCCTAACATATCAATTGCCCA 8454 36 100.0 30 .................................... CAATCTTATCACGTTCAGCTTTTGGTGTTT 8388 36 100.0 30 .................................... TTTTGATGTTGTCAGGTATCCTACTATATC 8322 36 100.0 30 .................................... CGATTTAATGGGATATAAACCTGAAAATGG 8256 36 100.0 30 .................................... CAATTCCAATTGATTTACCAAGGTACAGCC 8190 36 100.0 30 .................................... GTGATGATGAGATTCAAGGATTGATGCGAA 8124 36 100.0 30 .................................... TGTCGTAACTAAAACTCATAACTCCTTTAT 8058 36 100.0 30 .................................... CGCAACTCGAAGACCCATTTTTTCACCCAG 7992 36 100.0 30 .................................... GGCATCACGTTACGTTAATTTGGAAACAGT 7926 36 100.0 30 .................................... CATTCAAACATAAAATCAATCACGATATCC 7860 36 100.0 30 .................................... ATATCCTTCCTCTTCATCGCCCTCGAAATC 7794 36 100.0 30 .................................... AAATAGCGGATGCATTGGATGTGAGCATGG 7728 36 100.0 30 .................................... TTCCAGTAGTAACCGCCAAAACAGCGTCAG 7662 36 100.0 30 .................................... CATTCCAATCGTGGCATTATCTCAATTGTT 7596 36 100.0 30 .................................... TCCACATACATCCTAGCTGTGTGCACACGA 7530 36 100.0 30 .................................... AGAAGTGTTTTCGAAGGAATTCCGATTAAA 7464 36 100.0 30 .................................... AACTATTACTCAATGCGATTGCTAATGGAT 7398 36 91.7 30 .......GA.......................C... GCATACTAAAATCAATATGTTACGTTATAC 7332 36 77.8 0 T.......A.A...........A..AA.......CT | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 98.9 30 GTTTCAGAGGGATGTTAAAGAAGTAGGTTCAATATC # Left flank : CGGAACTTTAGTTGCTCAAAAATACCTATCAAAGGTTGAAAAGTTATATAGTGATTCGTTAGTTGACGAAAATCGTAACAAAATTCATGATCAGATGAATGAACTTTTTAATACGGTTTCTGAACAATTATTTATGCTAGATCTACCTATCAGCATTGATTACGATTTTGAAATCAAACGGCTTTTAAAATTTTGTAATATTCGTTTTGATCCAGTATTGACAAATAATCCCTATGGTATAATTGAGTCGGTTCTAAAGATTCATGAAGAATGTGATATTAAATCTTGCGTGGTGTTAACGAATGTAGCTCATTATTTAACGCCATCGCAGTATTTAGATTTAATTGAACTAGTTAAACAAACTAATCAATCATTAGTTTTAATTGAATTCACAGAAATAGGATGTCAGGAGTTCTATAAAAATAGTGAATTTTACTATATTGACGCCGATTTCGTTGACTGGCATCTGTAACCGATTATATTTTCATTAGAAATAAACG # Right flank : AATGACGGAGTAGCTACCGTTTTGCTTTAAAATAATTAAAAGTAGGATTGTACCCTAAACAACGTTACCGAATAAGTATGAAAGTCAACGTCTTTTGGTATATAGTCCTGTAAATAAAAAGGCCCTCACCAAGGTCTATCTCAGAAGTTAATTTTTCACTTTAACTTTTGCGGTAGACCTCAGTGGGGGTCTTTATTTGATTAAATTTAATATCCAGTCAACCCTTGTGTTTGGGTTCCTTGTGTTGGGGTAGTTTGTTGTGGTGCCGTGTAACCACCGCCAGTACCGGTAGTGGTATTAGTACCAGCGGAAGATCCATACTGGTTAGCGGTGCCCGATGATGATTCTGAACCATTTGTGGTGGCATCATCGTCAACTTCACCTGTAACTAAACTACTTAAGCCGGTTGTTCCAGTGGTTTTTTTGCTGAGTTCCAAAGCGCTTCTGATAAAGTTCGTGACACGTTGACGCTCGGATTTAGGAACAACTTCGTAGGCACC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAGGGATGTTAAAGAAGTAGGTTCAATATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //