Array 1 169085-166297 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHDK010000004.1 Campylobacter sputorum strain YZU0716 NODE_4_length_177793_cov_124.296839, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 169084 30 100.0 36 .............................. TAAAATTATTTGATGTTCAGTTACCTAATGAGATTG 169018 30 100.0 37 .............................. AAAAATAAAGTAGAAAAGGTGATGGAACAAAGAAATC 168951 30 100.0 36 .............................. AAGATAGATGATAGTGTAGTCCTTGCTACAAGGCAG 168885 30 100.0 35 .............................. CAAAAAAACAACGCCTTTAATGATGATGAGCTTAC 168820 30 100.0 35 .............................. TAGCTACTTTGATAGAAAATGAAGTTTTGGATGGA 168755 30 100.0 38 .............................. CTGCTTGCATTGTTCTCTCCTGTGCAGATTTTTGCTAT 168687 30 100.0 35 .............................. TAACAAGCAAGAAGAAGCTTGGAAAAAAGTTCATC 168622 30 100.0 35 .............................. CAAATAAATTTCCGCCTGTAATGGCTTGTGCTGTG 168557 30 100.0 35 .............................. TAAGTTCATTTATACCGCCAAGTCCAAGTGAATTT 168492 30 100.0 36 .............................. ATAAAAAAGGATGACAATGCTTAAATTTGAAGTTGG 168426 30 100.0 35 .............................. ATTTCAGCTTTGATACAGCTTATCGTAATACTTTA 168361 30 100.0 36 .............................. TAAATTTAAGCCATATTGCAGTAGGTGATGGAGAGA 168295 30 100.0 36 .............................. AAGTAATAAAACAAATAAAAGATAATCCAACACATT 168229 30 100.0 34 .............................. TTAGTGTCAATGTCAAAGCCAATTTTATATAAAA 168165 30 100.0 36 .............................. CTGTAGCAACAATAGTAGAAACCATATCAATTCCAG 168099 30 100.0 37 .............................. TTAGAATGTGCTATCAAATGGGTGTAAATAGTGTTAA 168032 30 100.0 36 .............................. TTGGATATACATACGGAGGAAGTGGGGATAATTTCA 167966 30 100.0 35 .............................. CATTTAGCCCTCTGCGAATACAAAGAACACTCTCG 167901 30 96.7 35 ..................A........... TAGTCCTGTTTGTATCAACATTAGGGATTATTAGC 167836 30 100.0 35 .............................. TTACAGGTGAGTATATTCCATTTGACTATACAAAA 167771 30 100.0 36 .............................. CAAAAAAGCTAAAAAGCTAGAACAAAAGCTGTTTGA 167705 30 100.0 36 .............................. TTAGGTAAAAAAACTATCAAATCAGGGAAACCTGCA 167639 30 100.0 35 .............................. GTTTAAAAAGGATTATTTATGGATGAATTATCAAA 167574 30 100.0 35 .............................. ATGAGAGTAATATAAATCTCATAAGGCAAGAATAC 167509 30 100.0 35 .............................. ATGTTAAATCCAACTATACCCATTCAACAACACAA 167444 30 100.0 34 .............................. TCAGAGAATGGGATATGTATTATAATGAGAATAA 167380 30 100.0 36 .............................. CTTAATTGTTTTGCAAATTGTGTTAAATCGTCATCC 167314 30 100.0 35 .............................. GCTTATATGACATCTTCTGCTGAAGATACTGCAGA 167249 30 100.0 37 .............................. CAAATAATGACGAGGCTACGACTACCGATATAAGTGA 167182 30 100.0 34 .............................. CTTAATCAAATGGTTAGAAATTTACGAATTAAAA 167118 30 100.0 35 .............................. CCAGCACCTATGATATTTGCCAAAGCCATTGGAAA 167053 30 100.0 37 .............................. ATTCTAAACTAGATACAAAAGCAGATAGTGAAGTAAG 166986 30 100.0 35 .............................. CAACAACAAGCCAAAATAGGTATCATAAAAATACC 166921 30 100.0 35 .............................. AAACTTCCTTGGCTAAAAAACAAACCAAGGGCGGT 166856 30 100.0 36 .............................. CGTTATAGTTACGGCCGCCGTTTACTCGGGCTTCGA 166790 30 100.0 36 .............................. CAGGAAAAGAAGTATCAAAAAGCTATCTTAGCGAAA 166724 30 100.0 36 .............................. TAAAGATGATATAGATAATAAAAGCGATGAGATAAA 166658 30 100.0 36 .............................. ATCCTATGTATGAGTTTGATAAACGAGGATTAATTT 166592 30 100.0 37 .............................. TAACAACAACTTTTAATATAAATGACCCAAATGCAAA 166525 30 100.0 36 .............................. CAACTATTGAAAAGGGTCGGCGATTTGGTTTTACAA 166459 30 100.0 37 .............................. CTTGAAGAGTTGCAAAAAGCTGAAAATTTAGAAGAAC 166392 30 100.0 36 .............................. AAGCTTCATCACTTAAATAATCGTGAACTACAACGG 166326 29 86.7 0 ..........-.C............T...T | A [166308] ========== ====== ====== ====== ============================== ====================================== ================== 43 30 99.6 36 GTTAAAATTTGATCCTATGGATTTTGAAAC # Left flank : TTAGGGGATAATTTGATTTTTAATATGCTAAACAAGGATGAAATCACAGCAAAAGACTTTAAAACCGATGCTGGAAGGATAAGATTTACAAACGAAGCGGTGCAAAAAATAGAGTTAAATATGATAAAAGCCCTTACTTCACAGGTAAAATTTGAAAATCAGCTTCTAACTTACAGACAGATAATTAGGCGTGAGGCAAATCAGATAAAAAAGTGTATTTGTGAGAATTATCCCTATGAAGGGTATGTTGATTAGTTTTATTGTGCGTAAGGGAAATTTTGTATTTTTTGGGGATTAGTTTTTAAAGCTAAATTTGGAATTATAAATTTTGGTTGGTATTTTGGTAGCGTTCAAACTTTTTTTAAAGCTAAATTTAAGTTTATACGAATGCCTATATTTAGCGATTTTGTTTTATAGACATAGCTTTTATAAGCGGCTTTTAAGCTGGATATATCTATAATAATTCGCAATGGTTGCCGATATATGACGATTTTGTTGCT # Right flank : CCAGCAATCTTTGCGGTAATAGTATCAGACGACATTCAAAATGGGGATATATAATCAAAAATAGTAAAAATCCCATTTTAAATGCAAATTTAAAACATTTAAACACTTTTTAAGCCAATTAACATCTCTTATCAACCCTACAAATTTACCTATTATTTGACACTCACATTCATAATATCTAACAGGTGTATATAAAGGATTATAAGATACTAGCATAAGCTCATTTTCTTGTTTATAGCACTCTTTTATTACAAGTCCATCTGGTGTATTGATAGCATAAATGCTTCCATCTTTGTATATTATATCAATAGCTATAATGCATAAGTCGCTTTCCATGATATGAGGTTCCATACTATAACCCATACAAGAGATTATATCAACTTGATGTATAGTGCCACAATTACTAATTTTTTGAGTATTTTTTTATCTATTATTACTTCATCAAGCTCATTTTCATCATTATATTCTCCACTATCAAGACTAGCTTTTAAGCTAGACAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //