Array 1 62239-66830 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESHG010000002.1 Acinetobacter baumannii strain M15 NODE_2_length_79062_cov_14.618142, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 62239 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 62299 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 62359 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 62419 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 62479 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 62539 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 62599 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 62659 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 62719 30 93.3 30 ............................GA TTACATCCACGAAAAGAGCTTTAATCAGGA 62779 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 62839 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 62899 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 62959 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 63019 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 63079 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 63139 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 63199 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 63259 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 63319 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 63379 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 63439 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 63499 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 63559 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 63619 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 63679 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 63739 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 63799 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 63859 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 63919 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 63979 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 64039 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 64099 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 64159 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 64219 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 64279 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 64339 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 64399 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 64459 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 64519 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 64579 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 64639 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 64699 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 64759 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 64819 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 64879 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 64939 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 64999 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 65059 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 65119 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 65179 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 65239 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 65299 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 65359 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 65419 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 65479 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 65539 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 65599 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 65659 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 65719 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 65780 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 65840 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 65900 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 65960 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 66020 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 66080 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 66140 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 66200 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 66260 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 66321 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 66381 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 66441 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 66501 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 66561 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 66621 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 66681 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 66741 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 66801 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 77 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAAAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //