Array 1 146875-149473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054059.1 Candidatus Absconditicoccus praedator strain M39-6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 146875 36 100.0 28 .................................... GCATAGGTTTTCAGTGTATCCAAGCAAA 146939 36 100.0 26 .................................... TGCTCTTTCAATATTCCATATTCAAC 147001 36 100.0 33 .................................... TGTTTTTCTATCTTTAAAATCTTCTTGTAATAT 147070 36 100.0 28 .................................... GTTGTGATGGACTCTGACTCTAATTTTA 147134 36 100.0 31 .................................... GCTCAATAAGATTGCCATTCTTCTAGAGGTT 147201 36 100.0 28 .................................... TAAAGATATAAAAGCAATTTATCTATAA 147265 36 100.0 30 .................................... ACCTATCTCAGTTTTGGTTGTTTAGCCTAA 147331 36 100.0 31 .................................... TGTTGCCGTGATCCTAAATGTTAATGGCATC 147398 36 100.0 30 .................................... AACTCTTTTTTCATCAGCTCTAATATAAGA 147464 36 100.0 29 .................................... TTTTTCTAATTCTTCGTTTTTGTTTTCAT 147529 36 100.0 29 .................................... TTGTCAGTCAGGTGAATATCAAACTGAAT 147594 36 100.0 27 .................................... GGGCTAAGTAAGGAGCTTATACTTATT 147657 36 100.0 27 .................................... GGTGGTGGTGCACCTACGAGACAAGAA 147720 36 100.0 27 .................................... TGGGGTTCCGATTTTTTGTTGACTATT 147783 36 100.0 26 .................................... AACTTGATGTATCTATTCATGCATAA 147845 36 100.0 28 .................................... ATTTGCATACTTCCATTTAAATCATCAA 147909 36 100.0 26 .................................... TCTTTACAGTATTTAAGTAGTTCAGA 147971 36 100.0 26 .................................... ACTTCATTGACTTCATTGTCATAATA 148033 36 100.0 32 .................................... TTGCGGAACATTGATACTTCAAAGATAATAAA 148101 36 100.0 26 .................................... CAGTTTAATTTTGTATTTAATTGAAA 148163 36 100.0 29 .................................... ACTATCATACACCTCAAAACTTCATGTAT 148228 36 100.0 27 .................................... ATATAGTTTTTGATATCAAGAAATTCA 148291 36 100.0 27 .................................... TTTTTGTCTTGATATAGTTTTGCTATA 148354 36 100.0 27 .................................... AATTGTAGTCGTTCAGTCAACAAAAGA 148417 36 100.0 27 .................................... ATTTATTGAATTGCTTTGAATTGTAAC 148480 36 100.0 31 .................................... TGGCCGATATCTGATGACGCAAAAAAAACCA 148547 36 100.0 30 .................................... GAAGAAACACTAACAGAAGCTGGGGACCGT 148613 36 100.0 30 .................................... AGGTGCAAGAACCTGATTTATATTATTAAA 148679 36 100.0 27 .................................... ATCAGGACTGAATGTTACTGAATATAC 148742 36 100.0 26 .................................... TCCTTCTTGCTTTTTCTCTTTCGTTT 148804 36 100.0 29 .................................... ATTATTAGGAAGTTGAATATTATCAGCTG 148869 36 100.0 26 .................................... CAAAGGGGCTGAATGTTACTGAATTT 148931 36 100.0 26 .................................... GCTATATTATCGTTCTTTTTATATTC 148993 36 100.0 27 .................................... AATTGAGTGAGTTAGTGATTTGCATTT 149056 36 100.0 27 .................................... AATCTGATTTCTTTTCTGTCTTTAGAT 149119 36 100.0 28 .................................... ATTTTCATGAGAATTCTGATACTGGATT 149183 36 100.0 28 .................................... GTTTTGAATACCATTTTTATTTTATTAG 149247 36 100.0 29 .................................... TATTAGGATATAAACTAGATACATAATCT 149312 36 100.0 26 .................................... TCACACTGTCTTCTAAATCTTTACAA 149374 36 100.0 27 .................................... TTCAGCTTGCTTGTCCATATTTTCCAT 149437 36 80.6 0 .........................T..AAAC.A.A | A [149462] ========== ====== ====== ====== ==================================== ================================= ================== 41 36 99.5 28 ATTTATAACTCATATGATATTTCTACTATTGTAGAT # Left flank : TAATGATAAGGTTAGGACTAAGTTTTCAAAATTTTTGAAAAAATATGGTAGGAGATTGCAATATTCAGTTTTTGAAATCAAAAATAGTGAAAGGGTTTTGTGATTGATATTAGCTGAAGTTGATAAAATTTTTGCAAAATCATTTGAAAATACTGATAGTATTATTATATTTAGTATGTGTGAATGATGTGTCAAAAAAGTAGTCAGATATGGCTATGCAGTAAATGAAGAAAGTGATTTGCTGTTTATGTAAATTCATACATAGTTGATCTTTAACAGTTATTTTGATAAACTACATTATTAGAAAATCATACTCTATGGTGATAGAAATAACAATGTGGGTTGTAATAAATAAGAAATTATAGTTAAGACTTGGGTTTGCAAAGAAAAATTGCAAAGCTATAGTCTTTATAAAAATGGATTGGCGGTCCAACTGGGTTTTGGAAGCTCGGACATAGATCTGTATGCTTCCAAACTCCAGTAAATAAGCCAAAAGTGCT # Right flank : AAAAAGGAAGCCATAGTAGGCTCCCTTTTTTTGTAATTGTAAACTCAAATTATTGTTCACAAGCTTCTCACCAATTTGGTTGTTTGTCATCATTTCATTGGAATCCAGCTCATCTATCAAAGTGAACTACTTGATTTCTTCAATTTATATTTTCAACACACCAACTACTAATATCTTGCTCAAATTTTTCAGCACTTCTAAACATAAATTTCATATCTTCTACAGAATCAACATTCCATTCACTTATATCTTGATTAAAAGAACTTGCATTCCAAAACATTTTACTCATGTCTGTAACATTGCTTACATCCCAGTGAGTAATGTTATTTGTATCCCAGAAATCAACCTCATTTTCATCAGAAGAATTGTTTCCTGGTGCGTTTCATCTTCAGTTTCATCTTCAGTTTCATCTTCAGTTTCATCTTCCATTTGAGTTTCTATTATTTGAGTTATTAAAGTTTTTGATGTCTTGAAATAAACCGCTTAAATCTTCTATGTTG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATAACTCATATGATATTTCTACTATTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 189688-191178 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054059.1 Candidatus Absconditicoccus praedator strain M39-6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 189688 30 100.0 36 .............................. ATGATACAAACCGAGAACCAAAAAAATGTCATATTG 189754 30 100.0 37 .............................. GTTATTAAACTTATATTTACATTATATCAACTAGCAC 189821 30 100.0 36 .............................. GACCTGTTCCTTCTATTATATCGTCAAGCCTTCTAG 189887 30 100.0 36 .............................. AGAAAATGAACACAAGATAGAAGTACAAGTTTAAAT 189953 30 100.0 36 .............................. ATCAAAGATACATATAAATGAAAAGCTAGAGAGCAT 190019 30 100.0 36 .............................. CTTCTGCTCAATCTTCTATTCCATCTAATTTAGTTT 190085 30 100.0 36 .............................. GATTATGAAATAGTAGTAGAATTAGGGGAACATCTA 190151 30 100.0 37 .............................. TGAGAATATATATGCTGATTACTCATAGGCTTTCATT 190218 30 100.0 36 .............................. TATGAATTTTAGGTATGACAATAGGACCAATAATAA 190284 30 100.0 37 .............................. CATCTTTGAAATAATTGACAAGCAAGCACGGAATGGG 190351 30 100.0 37 .............................. CATCTTGGCTCTCATCTTCAACAATAAATTCCTCTCA 190418 30 100.0 36 .............................. AACAATGAAGGAAGTCAGAGCAGGAAAGAGAAATGG 190484 30 100.0 35 .............................. AAAGCTTCATCACAAAGAAAAAACGATAATGCTGA 190549 30 100.0 37 .............................. TGCATAAATGTATCTCTATACTCTATCGTTACTTCTA 190616 30 100.0 37 .............................. AGTGATTGATATACACCAGTTAATAAGTTTTTAGCAA 190683 30 100.0 37 .............................. AAACAACAATAATAATATTTTTTTCATTTTTTTATGT 190750 30 100.0 36 .............................. AAAACTATAAAAACAATAATATCTTTTTTGTTTTTG 190816 30 100.0 38 .............................. ACCCATCATAATAGTATACAAAATCTTGTTAATATTTG 190884 30 100.0 37 .............................. ATTCCACCAGCTCATCAATATTTACTTGTTTTGCTTT 190951 30 100.0 36 .............................. CAGCTATTGAGCAGTACAATATAAAATACCAAGAGA 191017 30 100.0 36 .............................. TTTATGTTTGTGACTCACATTTTGGATAAAAGAAAA 191083 30 100.0 36 .............................. GATACTTTTTCTGGTATCCAACAAGTTGTTATCATT 191149 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 100.0 36 CTCTTAGCTGAACTAATGTAGTATTGAAAT # Left flank : GCTAATAAAACATATCATGTGAGAAGAGCAGTTTGTTCCTTTTAGTATGGAAAAAAATTATTAATGTATGTAATTGTAATTTATGATATAACAGAAAAAAAAGTAACCAAAGTTCATAAATATTTGAAGAAAAAACTTAATTGGATACAAAATAGTGTTTTTGAAGGTGAACTTCCGGAGTCTGATTTTGTTCGTATGAAAGAAGATCTCAAAAAAATGGTAAAAAAATTTCAGAAGGAAATACCAGAGTGAGAAAATAGTATAATTATTTTTCATATGCCATATAAATGAGCTATGGAAAGACAGGTAATATGAGAAGAAAAAAGTCCAATTGATAATATGATATAATAGATTTTTTTGGGATGTGAAACAGATTTTTTGTAAAAAACTTTTATTTGTTTTTCAGTTGGAAAAAACTTATTAATTATATTTGAAAAAATCTTGCATTAGAGCTTTATATAAATATTATTTAATTAAGGGTTTTGGCAGGTGTCCAAAGC # Right flank : TAAATGATAGCTTTTTTTACTTTTTAATAATTTTCTCTTGAAATCCAAAAAATCATATTTTGATTATTTACTCTTATAGGGGATGTCATTTTTGTTTGATTCTATTTAAGTATTTGGACTTGGGAATATGAAAATGTGGATAGCTAGATCATAGCTTCCATATTTTTTTTATAGAACAAAATTTAGTAAACTATTACTATAAAAGTATGGCTTCTACAAGCTGGAATTAAGTTTTTTTATTGAAAAAGCCAGATAATTACTTATATTTATTATAATTTTAACCATTAAAACAAAATAAGTATGTACGAAGAGTTGGTAAAAAAACTAAGAGAAATTAGAAATTTAGATAATATGCAAGCTTTGGCCACTTGGGATAAAGAAACTTATATGCCTAGTTGAGCCAGTGATGATAGGTGAGAAATGCTTGCTACATTGACAAAAATAAAATTTGAAAAGTTTACTGAAAAAAATCTTTATGATTTGGTAAATAAACTTTTGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTAGCTGAACTAATGTAGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 3 808342-809766 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054059.1 Candidatus Absconditicoccus praedator strain M39-6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 808342 35 100.0 34 ................................... CACCCGCTTAATTTCTTATCTGTACCCACCTAAG 808411 35 100.0 36 ................................... TTTATTTTATTCCAATCATTTTTTTCAAATACTCAA 808482 35 100.0 42 ................................... TCACTAGCTTCAATTCATCCAATAGCCTCTATTGAGTCGTTG 808559 35 100.0 40 ................................... TTCACAAGAGATTTGATTAAAAAAGAATTTTTTCATTTTA 808634 35 100.0 37 ................................... TCGTAGCCTGCCTTTTTTAGCAGGCCAAAGAAACTAC 808706 35 100.0 39 ................................... TCTAAAGGAGTTGCAACCCAGTTTTCTCAAACTTGATTA 808780 35 100.0 40 ................................... AAGAACTGGTCTATCTGCTTACTAATTTCTTTAATATCTC 808855 35 100.0 40 ................................... CTCATTTATACAAGTTATCATCACAACTTTCACTTATTAC 808930 35 100.0 34 ................................... TTTCTAATTTCTCAAACCTTTCTTTCTCTTCTTG 808999 35 100.0 37 ................................... TTGCTTCGCATATTGAGCAACAGGTAAAGATACAATA 809071 35 100.0 40 ................................... AAATCTGAAATCAATCTTTTCTTGTTTTATCCATTTCATC 809146 35 100.0 39 ................................... CACCATGTTAAAAGCAAAAATAAACCTTACCTAAAAAGG 809220 35 100.0 33 ................................... ATTTCATCTTCCTTGATTATATAATTATCGTTG 809288 35 100.0 39 ................................... TTTACTCTTATACATTTATTATTATAATTAAGAATTAAA 809362 35 100.0 41 ................................... ATAAACAACATCAGGCAAGTCTAATCACAACATATCTTTGA 809438 35 100.0 39 ................................... AATAAAAATAATATTTTTTGAATGTGTCTTTCGTTATTT 809512 35 100.0 40 ................................... TCAAAAAGAGTAGAGTATTCCTTTACCACTTTAGTAAACA 809587 35 100.0 38 ................................... TTTAGTAAAGAAAGATTCTATTTCAGGACAATAGAAAA 809660 35 100.0 37 ................................... TATATATATTTTTTTTCTGTTTTTTGATCAAAAATTA 809732 35 97.1 0 A.................................. | ========== ====== ====== ====== =================================== ========================================== ================== 20 35 99.9 38 TAAAAAGAAAAGCTCTTAAACAAGAGCATCGAAAC # Left flank : CAAATACCAAAGCAAGAAATAGGGTGGTGAAACTTTTGGAAAGCTATGGTTTTAGAGTCCAAAAGTCAGTTTTTGAAGTACAGTTGAATGATAGACAATTCAAAATATTGAAAAAACAACTCAAAAAGATTTTGGATTGGGCAAAAAAACAATATCCAGATGAGCATGAAAATATTGATTCTGTGAAATTCTATATTTTATCAAAAGTAGGTGAGTGAAATTTGGATGGTAGAGTAGATGGTATATGAGATGGTTATGAAAAAATATACTTTGAGGAATTTATGATAATATAATGATATTGAAAAAATTTAATAAAAATATATAAACTTGCTAATTGATTTTGATAATTTATAAAAAAGTATGCAAATTTTTCTCGGAAGAGGTCTTGATTGTGTTTTGTGCTATTTTATTTGTTTAAATTGTTTAATTTTGGAAAAAATAAAAATTTTCTCGGAAACTGTGCTTGAAAATAAGTTTGCAATTGTTATCATATACTTGCC # Right flank : CCGTGTGTGTCTTTTATTTTCATCTTTATTTTTTTGGGTCTTGGGTACTTTAGCCTAAAGAAGAAGTAAAATTTTTACATAATTTCATTAGTTGTTTATATTTATTTTGTTTCAATAATCAACAATTAAATCTCCATTCACATTCTTTTAGGTATATATCATAATATTCCTTTTTGATTCAGTTAAATTTAGCCAATCTTCTTTTACAATAGCTTCGAAAACTTTCTATTCAATTTATATGTTGTTTTCATCTAGCAAACTCATTATTACTATGTATAACTCTATAGTGTTTCTTGTATCATAAGTCTACTAATCAATCATAACTTTTCCAGTAGTCTGTGTTTATCTTGCTGTTCTCTAAACTTACTTTATCTCTTATAATTGGTATTAAAGTTTCTGCTGAACAATCAGGAACTATACGCACATAAACTTCTCACTCTCTCTTCAATAGTCATAAAACTTTAATTTTTCAACTAGCTCAACGTCATCTTTTTCACCTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAAAAAGAAAAGCTCTTAAACAAGAGCATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //