Array 1 87001-84348 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPO010000008.1 Arcanobacterium phocae strain 13808 NODE_8_length_102264_cov_101.428244, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 87000 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 86939 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 86878 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 86817 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 86756 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 86695 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 86634 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 86573 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 86512 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 86452 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 86391 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 86330 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 86269 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 86208 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 86147 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 86086 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 86025 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 85964 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 85903 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 85842 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 85781 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 85720 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 85659 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 85598 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 85537 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 85476 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 85415 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 85354 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85293 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85232 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85171 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85110 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85049 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 84988 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 84925 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84864 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84803 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84742 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84681 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84620 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84559 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84498 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 84437 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84376 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 44 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //