Array 1 467935-464118 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMW01000004.1 Nocardia camponoti strain CGMCC 4.7278 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 467934 36 100.0 34 .................................... GGCGTGACGGTGCACTTCCGACCGATCCCCGGCG 467864 36 100.0 34 .................................... TTCGCCGCGATGGCCGAAAGCTACGCCTACGAAA 467794 36 100.0 40 .................................... CCATGGCCGGACAAACGCCCAATTACCAACTCATCTACGC 467718 36 100.0 34 .................................... CGCCGGGCTCGCCACCACGAGGCGCCGGCCACCG 467648 36 100.0 36 .................................... ATGTCGAGCCCCTTGAGCAGGGCGTACGCGGCCGAG 467576 36 100.0 39 .................................... ACTCACTGTCGTGCATGAGTTGCCCGCCGCCCTGCTGAC 467501 36 100.0 40 .................................... GTGCGTGACCGGGCGGTGATTCGGTGAGCCTGACGATTCC 467425 36 100.0 33 .................................... TGCAGTCGAGTCGACGGCACCCGCTGCAGTACC 467356 36 100.0 38 .................................... CGAGGCCACGACCCCGGCACCTGATAGTTCGCGATGTC 467282 36 100.0 37 .................................... TGAGGTGAACACGTGTTTCACATGCAACACGATCTAA 467209 36 100.0 36 .................................... TTAATTCCCGAAAATGGGGAATTAATTACGCCTTTT 467137 36 100.0 36 .................................... CGGTATGCAAACCTTTCGCGCACAAATCATCCCCCT 467065 36 100.0 38 .................................... CCACCTTGCGCGCACTCGCGCACGTCGGCCAGCTCGCG 466991 36 100.0 35 .................................... CTCGATCGTCACCCTGGCGGCGGAGTGACTTTGGC 466920 36 100.0 36 .................................... TTCGCGCGGACAGGCGGCGGGACTGCGATAACGGTG 466848 36 100.0 36 .................................... GCCAATCTCGATGCTGCCGACGTGCTGGTGCTCGCC 466776 36 100.0 37 .................................... CTCCTACGGGTGTAGCTGACGCTACCTGAGCTGCGGG 466703 36 100.0 41 .................................... AGGACCGGTGAGTCGGGGTTGTGTTGGAGCGCGCGGATCGC 466626 36 100.0 37 .................................... AGCAGCCGCACCCACGGGTCCGGGGGCAGGTTCGGCG 466553 36 100.0 37 .................................... CCATTTCACCCGGTTGCAGCCAGCCGCCCGAGTCGCC 466480 36 100.0 34 .................................... GAGCGCCATCTCGCCGCGCGCGAGGGCCGTCTCG 466410 36 100.0 37 .................................... CCGTCCTCAGGGCCTGCGACCACCCGAGAGGAATCCG 466337 36 100.0 35 .................................... ACTCACATGCTTCAACAGGGTGAGGTCACGGGTCG 466266 36 100.0 40 .................................... GCCCCGCAAACCCGCCGCGTCGGGGCAATGCAGACAACCT 466190 36 100.0 37 .................................... CAGCTACACCACCAACAAGGGCGTGACCATCGAAGTC 466117 36 100.0 36 .................................... CGACAAGCTCGCCGCCGTGCTGGCCGAGGCGCTCAG 466045 36 100.0 38 .................................... TTCCGGCGGGCGGCACGCAACGCGACTCGGCTGCTGCG 465971 36 100.0 37 .................................... GGCCCGTACGCGGTGACCCACCACGACGGGGACCTGC 465898 36 100.0 34 .................................... CCAGCGGCCGCCGCCGCAGCGACCACCGCGTCGG 465828 36 100.0 37 .................................... AGGCGATGCCGGTCGGCGTCGATGATGCGTGATTCGC 465755 36 100.0 34 .................................... AAGCTCGGCCCCGGTTCGCTGGTCCTCGGCCCCG 465685 36 100.0 36 .................................... GGTTTTCTGCGGTCGGTGCTGCTGCTGGTCACCGTG 465613 36 100.0 36 .................................... ACGACCCCGCCGGAGTAGTCGGGCGACGTCGAACCT 465541 36 100.0 36 .................................... TCATCGGTGGCCTCCTTGCCGGTCCGGGACGGTCCG 465469 36 100.0 41 .................................... CTAGCCAGCGCGGGCCGCCGTCGGCGAGCCAGTCGGCAACC 465392 36 100.0 37 .................................... CACTCGTCATTGCCAGCCTCCTCGGGGGGGACGTGCA 465319 36 97.2 34 ......C............................. GCCAACATCACGCTGCCATCCTGGCTCGACGCCG 465249 36 100.0 34 .................................... GGGCATGTTGTTCCGGAGGTCGGGTTGCATCAGC 465179 36 100.0 39 .................................... ACCCCAACCCCACCACCTTTGCGCCTGACCAGGGGCAAC 465104 36 97.2 37 ..............G..................... GCTCGACGACCACGGGCACGGTGACGCGGCGGGTACG 465031 36 97.2 37 ..............G..................... GACGGCGAGTTCCATCCGCAGGGGTGGCTCGACCCGG 464958 36 97.2 36 ..............G..................... CAGGGCGGCGTGCCCGTCGGCGTTGGTGATGATGGC 464886 36 97.2 37 ..............G..................... GACGACGACACCCACGTCGCACGCAAGGCGACGATCT 464813 36 100.0 38 .................................... GCCAGCGACGCCGACACGTCGACGACCTGCACCTCGAG 464739 36 97.2 38 ..............G..................... TGTCGGTGAAGGGGCCGGGCTTGTGTTTTCGCTGTGCT 464665 36 97.2 36 ..............G..................... TCGGATGTGCACGGCGTTGCCTGCCCACCATCCCGA 464593 36 94.4 34 ..............G.............G....... CCGAGCTCGGCCAAGCTGGCGGCCGTGACCGGCG 464523 36 97.2 35 ..............G..................... ACCAAAACAACGTTGGCTGTGTGGTCGCCCGCGTC 464452 36 97.2 37 ..............G..................... AGGATGTCGCCACCAGCGGTGGCGAGGTTGCCGCTCG 464379 36 94.4 37 ..............G.......T............. TGACAATGGTCAGAGGGCGGGAATGGACCGGTTTCGA 464306 36 94.4 41 ..............G....................T ACCCGGCAGTACACCCCGATCCATGAGGCGCAGCTCGTCAC 464229 36 97.2 40 ..............G..................... AACTGACCGGACCGTTCGAACACCGCGCGGTTGAGCGCTT 464153 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 53 36 99.2 37 GCCGCAGCTCGTTCACGAGCTGCACTTCATTGAGGC # Left flank : GTGAGTAGAGACGACGCGCATAGGTTTCTCATCGCTTACGACGTTGCGGACGATCGCCGACGGGATCGGCTAGCGAAATGTCTTCTGCGACACGGAGATAGGGTGCAGTACAGCGTTTTCGTCGTCGACGTGAGCGCGGCACGAATGCTTCGATTGCAGCATGAGATAGCGGGTCTGATTGTGGCAGTGGAAGATTCGGTGATTTACTGCGACCTTGGCGTCGCGCGCTCGGTCGATGTAGCGCGCTACCGCGTTGTAGGGCGTTCGCGTCATGTGACGGGTTCTGGCCCGATCATTATTTGAGTAGTCGGGGTAATTGGCGGCGCGAGGGCTCAATCAACACGGATTCTCCGGCGAGCCTTCGCGTCCTGTTTGCGCAGGTTAAGCAGCATGCTTAGCCGTCAAGCCCGCTAGAAACTGGGGTTTCGTCGCGCGTGTCTGTCGGACCTCTCGCGAGGGCTCGCACTGACGCTGGTCAGCGGGTGCATATGATCGACCCT # Right flank : GGGGCAGGGCCTGGCGTGGCCCGCTCTACCCAAGCGAATCCGCTCAGATTCCTTGGTTTGTGGACCGCAATGTGGACGCAAGTAGGGCGCAATCGAATGATTACGCCCTAAGCTGCTGGTTTCCGTGTCACGAGGGGTACTTGAACCGCCTCGTGCACCCTGTTCACGACCCGCGAACTTGGGAATCCTTGGGGTAGTTCGGGATTGGCTGGGGTGATATGGGCCGCGATTAGCCGCGTTTGTGGACGGCGTCCACAAGGCGATCCGGGCTAGGCAGTGACGCCGAGCTGCGTGGCGAGCGCCCGCGAGTCCCTTGAGATGATCTTGCCGCCGCGCGTTACGAGCTCGCCCGCGAGCGATCGCGCCAGCGGGTGGCACCGCATGGACTCCTCGGACACGGACGCGCCCGTGCGCAGCGCGCCGAGCGTGCCGAACCAGTCGCGCTGCTGTGAGTACGCCCGCGCCAGTTCGAGCCACAGCCGCGCGCGCCGGTCGACGCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAGCTCGTTCACGAGCTGCACTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.00,-8.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 460561-455824 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMMW01000002.1 Nocardia camponoti strain CGMCC 4.7278 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 460560 37 100.0 37 ..................................... CCATGTGCGGCCAGTTGCCACTGCAGAGCCGCCGCCA 460486 37 100.0 35 ..................................... CCGGATGTGGGCCCCTGGCGGGGTCACACCGACGG 460414 37 100.0 36 ..................................... ATCCGGTAAGCGCCTCGACCGCACCGGGTTCCCGCG 460341 37 100.0 35 ..................................... AACCCGCTACCGCTGCGGACCGCATCGGGGGCGCG 460269 37 100.0 36 ..................................... ATCGAGACCTTGACCGGAGCGTCGTATAAGCCCTGG 460196 37 100.0 35 ..................................... CGAGGATAGGGAGTGGTCGCGTTGGGGCCGGATCG 460124 37 100.0 37 ..................................... GGATTTGTGCTCAGCGATAAACTCGCCGAGCGTTAGG 460050 37 100.0 34 ..................................... TGGAACGCCTCGATGGTTGCCGGACCGGTGAGCG 459979 37 100.0 34 ..................................... GGGCCCCGAAACGGGTGTTTTCCCAGGTCGCCCA 459908 37 100.0 38 ..................................... CGACATCCAGTCCAGGATGCGCGCGGCGGCCTCGGCGG 459833 37 100.0 36 ..................................... CACACCCCGACCGGCAAGCACCCGAGGTCAGGTGCG 459760 37 100.0 37 ..................................... GATTGTCTTGAACGTGGGATTATCAGCCGCGATCGAG 459686 37 100.0 35 ..................................... GGTGGGACTTACGCGGCGACGCGGGATGCGGTCGA 459614 37 100.0 36 ..................................... TGTGGCGTCCATAGCGGCTCCAGCGTCTCGACGGCC 459541 37 100.0 34 ..................................... GTCCTCGACGCAACCGACCGCGAACAGTTCGACC 459470 37 100.0 36 ..................................... GGTGTTGCCGCGCCAGTATTGTTCGACGTCGCCGAG 459397 37 100.0 36 ..................................... GGTTGCCGGAGAACGCAACCATCACATGACCATTGG 459324 37 100.0 34 ..................................... GGCCAATGGGTTGTTATACGTCTCGTGCGCGGTG 459253 37 100.0 36 ..................................... GGCACGGGCACGCGCGGCTTTCGCGCGGGCAGCGCG 459180 37 100.0 37 ..................................... CCTCAAATGCAGTCCGCTGGCGTAATGCTATGAAGGG 459106 37 100.0 36 ..................................... CGTGATGGCAAATGCGACGGCGGCACACCTGTTCGG 459033 37 100.0 33 ..................................... AGCGGACTCGACTTGCTTGGATGCGGCAGCGAT 458963 37 100.0 34 ..................................... TGCGCCGGGAATGCGTGCAACGCCATCGGGTAGC 458892 37 100.0 36 ..................................... GGGTGTGGTGGGGCCGACCACACCGTGTTGGTGCCA 458819 37 100.0 35 ..................................... GTGGAGGGCGTGCCCGACGCATGGGAACGCCGAAG 458747 37 100.0 36 ..................................... CCACCCGACCGCCTCAAGCGCTTCGGCCGCGTCCGC 458674 37 100.0 34 ..................................... AGGCGGGCGTCGGGATTGCCGCGGCGATGCCGGT 458603 37 100.0 34 ..................................... GGCGGCGTTGCTACCAGTCGCGAAAGTTCACGGT 458532 37 100.0 36 ..................................... AACTGGTCAAGGCGCATCGGCTGCACCACGCTGTCG 458459 37 100.0 35 ..................................... TTGTGCCCCACGCGCGCCATGACGAGGCGGGGGCT 458387 37 100.0 35 ..................................... CTTTGGGGAGGCGGTGGATGGCGACGACTTCGCCA 458315 37 100.0 33 ..................................... ACGTCCACGACCTGGATCAGGGCTTCGGGAACG 458245 37 100.0 37 ..................................... ATCGAACGTAACCCGGTACCGCACCGCCGGGGCGACG 458171 37 100.0 37 ..................................... ATCGAACGTAACCCGGTACCGCACCGCCGGGGCGACG 458097 37 100.0 37 ..................................... ACGGCCGAGGCCACGTTGTCGGTTGAACATGTCCCGG 458023 37 100.0 36 ..................................... CCATTCGAAGCCGTGCGCGCTAAACGCTGCACCGAG 457950 37 100.0 36 ..................................... AAGGGGCGCGGCCCGATCCAGATCACGGGACGCCAC 457877 37 100.0 35 ..................................... CGCGAGAAGTACGACGTGCTGCGGCTCAAGGCCAT 457805 37 100.0 34 ..................................... AACTGGTCGAGGCGCATCGGCTGCACCACGCTGT 457734 37 100.0 34 ..................................... ATGGGCGTGAACCGGCGCAGCGGACTAGCGACAA 457663 37 100.0 36 ..................................... GGGTTCGGCAGCTTCGACATTGACGTGCCCAACGCG 457590 37 100.0 35 ..................................... ACCGAAGCACTGTCACCCGTCGCGATCGAAAACCA 457518 37 100.0 35 ..................................... GCGTGCGTGCCTTGCGTGCGGTCACCTCGGACCAT 457446 37 100.0 36 ..................................... TACCGGGCCCGGTCTCGTGCTCGTGCTGTCGCCGAG 457373 37 100.0 36 ..................................... CGCCGTCGTCGGCAGCGGTGCGGCGACCGCGCGATA 457300 37 100.0 35 ..................................... ACGGTGGCGACCCAGTCTGATCCGGAGCTGGTTGA 457228 37 100.0 34 ..................................... TCAGGGCGAGGGCGAGATACTGGTGGGCGCCGCC 457157 37 89.2 34 ................................AAC.T GAATCCCGCTGCACCGCTTAACACCCGAGCCCAG 457086 37 100.0 37 ..................................... TCCGCCCGGGCATCGACCGACCTGAGCTCTCACCCGC 457012 37 100.0 35 ..................................... GCCTAGCGAGCACTCACAGACCCCGATAGCGCGGT 456940 37 100.0 34 ..................................... GTGTCCGAGTGGGGTGATGGGCGGATCACCACCG 456869 37 100.0 36 ..................................... CCATAAGCGGGTGGCGAACCATCGCGGGACCCCGCA 456796 37 100.0 36 ..................................... ACGCGCAACCTGTTCGGCCGCACTGACTGAGAGGTG 456723 37 97.3 35 .............C....................... CGGTGCTCCGTACAACGGCCGCGCTGGTCGTGACC 456651 37 100.0 35 ..................................... ACGGGCGCCGGCGCGAATGGGAAGTCGGTCTTCAT 456579 36 97.3 35 .........................-........... GTCGAGCAGGTCGAGGAAATGGACTGGTCGTGGGA 456508 37 97.3 35 ...................................G. TGAGAGGAGGTGGTGCCGAGTGAACCGCAAGCAGG 456436 37 94.6 36 .................A.T................. GGGACGGTCGACAACGACTACATCGCTGCGACGCCT 456363 37 97.3 34 ................A.................... CCCTGCTGTGCTACGAGTCCGACAATGCGGTCAG 456292 37 97.3 35 ..........G.......................... CCAGAGTTAGGTATCGAGCTTCCCGCCGAGCCCGT 456220 37 100.0 35 ..................................... GACCAGGACACCCACCAGTACAAGAACCAGGTCAC 456148 37 97.3 36 ...................G................. GACTACGTCGGCGCGGTCACCGATCCCGAAGACCCA 456075 37 100.0 34 ..................................... CGGATCGAGGTCGCGGCAGGCGCGCTGCTCTTCC 456004 37 100.0 34 ..................................... TGTGGTCGATCGTTGGCGCGCTGGCCCCGACATC 455933 37 97.3 36 ....................C................ GTCTACGTTTTCGGCGACGCCTTCAACGGCAGCGAG 455860 37 94.6 0 ......T...........A.................. | ========== ====== ====== ====== ===================================== ====================================== ================== 66 37 99.4 35 GCAGCGCCGGTCCGAAGGGATCGGCGAGGATCTCAAC # Left flank : AGTCCAGGCGCGCATTCTGGCTCGGCACCTGCGCGGGGACATGCCAAGCTACATCCCCTGGACGGTCACCTAATGGAACTGCTCGTTACCTACGACGTCGAAACGGTCACCCCTGAGGGCGCAGCCCGCTTACGGCGGGTGGCGAAGATCTGCGAGGGCTATGGCCACCGCGTCCAGAAGTCAGTCTTCGAGGTGACTTGCACGGCGATCACACGTCAGCAACTTGAAGCGGCCCTGGCTAGCACGATCAATGCGGCCAGCGATAGCATCCGGATCTATCGACTCGACGCAGGTACCTTCGCTGCGGCCCAACATCTCGGCGCCGCGCCCGCAGCACCGCATGGTGGCGCGCTGATCCTGTAGCCGACCAGGTTCGGAACCCCAAGTGCGATCGATTTCTCTGTTCGGTTCCCAACCTTTATCTTGGAGTAACAGTGCGGCATGTTGATAATCGGCGCTCAGATTGCCGACGTGATCAGCATGTATGCAGGTCAGGCAGG # Right flank : ACGAAGCGAGCGTGAGCGCGACCAGTTCGGGCACGTCGGCACCGCTGCCCATCACCATCGCCTCGGTGAACTTCGGTTCGCCGAGGCGGTCTTGTGCTTGCTGTTCGATGCGGAGGGCGTCCGGGTTGGCGCGGTCCGCTGACCCGCGCACCCGGTTCGCCGCGCCGAGTAGTTGGGTTGCCTGGGCGTCGTTGCCGGAGCACTGGGCGAAGTTTGCGATGCCGACGATGACCTGCGCGGTCAGTGCCGCGTAGTCGGCGGCGGTCGCCGCGTCGTAGGCCGCGCGAAGGTGCGTGCGGGCGTCCGTTGGCTGCTCGGCCAGGTAGCCGAGTTGGAGGTGAACTGTCGCGGTGACGTTGGGCAGTGCGGCGTCGTCGCCGAGCAGCGTCTCGGCGAGCTTGAGTTGCTCCCGTGCCACTGCTGAATCCCCTTGCCAGCGCGCCAGCTCCGCGCGAGTTAACGCGACCTCAGCGAGTGCGGTCGGCCAGCCCGTCACTTCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCGCCGGTCCGAAGGGATCGGCGAGGATCTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //