Array 1 1058775-1060207 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056515.1 Citrobacter freundii strain RHBSTW-00444 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1058775 29 100.0 32 ............................. CTCATCAGAAATTTACCTTTTCTCTTATCATC 1058836 29 100.0 32 ............................. CAAACCGGGCGTTATTGACGCTGAATCACATC 1058897 29 100.0 32 ............................. ACAATACGCTTTTTACCATCTGGCGTTAGTAG 1058958 29 100.0 32 ............................. GGAAAATGATTAGCCGTATCTGCCATCAGTTT 1059019 29 100.0 32 ............................. GGCGCGAATGTGCACCCTGAACTGTTCGAGAT 1059080 29 100.0 32 ............................. ATTATGCGGAGGGGCGTACCGGCCGCCGTTTG 1059141 29 100.0 32 ............................. GGATATGACAGCGAGTGTCAATTACCGCTAAG 1059202 29 100.0 32 ............................. ATTCTGTTTTTCACACCCGCCGCCAGCGTTTG 1059263 29 100.0 32 ............................. CACCATAATTTAGGCGTCACCAAACTGGAGGT 1059324 29 100.0 32 ............................. CAGGCGAGGCGGTAATTGCGGTCTTTCATGTT 1059385 29 100.0 32 ............................. AATTTCCCCGGTCTGGTCATCCCTGCACTGAA 1059446 29 100.0 32 ............................. GGTATGTTTCTGGGCAAAGTGTTTCTGGTAAA 1059507 29 100.0 32 ............................. CCGTTACCAAGGGCAAAGAATTTCAGTGGCAG 1059568 29 100.0 32 ............................. GCCGATACATCACTACAAGAGCAGCGCACCAA 1059629 29 100.0 32 ............................. GATTCATCAACGTTTGACCAAGCGCTTGAGCG 1059690 29 100.0 32 ............................. ACCAGTGGTTACGCGTAGCACTGGAAGAAATC 1059751 29 100.0 32 ............................. TTGGCGGTATATATCCAACGTATGACGATAAA 1059812 29 100.0 32 ............................. TAACGTCCCTCGGCTCCCGAGCTATGGGTGGG 1059873 29 100.0 32 ............................. GTTTCGCAGGGTACTCTTATCGTGTCATGTTG 1059934 29 100.0 32 ............................. GGAACGGGTAAAGACTTCCGCACCGCCGACTA 1059995 29 100.0 32 ............................. CCAGGGTGGGAAATGACTTTTATACCTACTGG 1060056 29 100.0 32 ............................. ATTTGAAAAAAGCAGCCGCCGATCGCAACGGG 1060117 29 100.0 32 ............................. CCGTGGGTAGTTAACTGGGAGCAGGAAATAAA 1060178 29 96.6 0 ...........................A. | A [1060198] ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTGCTGGCAGCCGGTGAGATCGAACCGCCACAGCCCGCGCCAGATATGCTACCACCCGCTATACCCGAGCCGCAGTTGCTGGGTGATGGCGGACATCGGGGGCATGGCTGATGAGTATGGTGGTGGTGGTGACGGAAAATGTACCGCCGCGTCTGCGAGGGCGTCTTGCGATTTGGTTACTGGAAATTCGAGCCGGTGTGTACGTCGGCGATATTTCAAAACGTGTGCGAGAAATGGTCTGGCAGCAGATTACACAATTGGGTGGTGCTGGAAACGTTGTGATGGCCTGGGCTACGAATACGGAGTCCGGTTTTGAGTTTCAAACCTGGGGTGAGAATCGACGTATTCCGGTGGATTTGGATGGGCTCAGATTGGTTTCCTTTCTTCCTGTTGAAAATCAGTAGGTTGTCTGTTCTTTAATAAAATGGATTTGTTAATTATAAGTTGGTAGGTTGTTGCTTGCTAAAAAATATATTAGAAAACAGTTATATATATTTAGT # Right flank : GCGCAACATTCAATAATTTGATTTCATAAAAATTATGAGTTTTTTTCAGCCTTTGCCAGCTCTTTGACCAGTGGCAGCATAATGCGTACCACGTCGCGACTGCGGTGCTCAATACGGCCGGGTAACGCTTTATCAATATGCTGCTGGTTATCCAGTCGAACGTCGTGCCAGCTGTTGCCTGCAGGGAATGAGGCGGTTTTGGCTCGCTGCTGATAGCCGTCTTTGTTACCCAGATTCCAGTTGGTGGCTTCGACGGAGAGCACGGCAATCCCCGCTTTGTCGAACACCTCCGCATCGTTACAACATCCAGTGCCTTTCGGGTAGTTCTTGTTCAGACCGGGATTAGTGCTGGCGGAGATACCGCGACTGCGTGCAATAGCCAGCGCCCGGTCGCGCGTGAGCTTACGAACCGCTTCAGGTGTTTTTTGCCCGCTGTTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //