Array 1 1843906-1844412 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020038.1 Agarilytica rhodophyticola strain 017 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1843906 28 100.0 32 ............................ TATTGCAAGTGTAAGCTTGACAGGTACGCCGC 1843966 28 100.0 32 ............................ ATTAGTGGTCGTTGTAGTAGAAGAAACAGGTT 1844026 28 96.4 32 ........T................... ATCAACAAAAAGTGTTGAGGAAAACATTTTAA 1844086 28 92.9 32 A.......T................... TAATTAAAGGCTTTAAAATCAACAATTTGACA 1844146 28 89.3 32 A.......T.................G. GCTGTGAGTTTTCTCGGTTATTCACATGTAAT 1844206 28 96.4 32 A........................... ATTCACAAAAACACGAATAAGATCACCAAATG 1844266 28 92.9 32 ...........AA............... AGTGAAAAGAGTTAAAACAGTAACAACCTGCA 1844326 28 92.9 32 ......C.....A............... ATAATTAAAACTCCTACATGTTTTAATTTTTT 1844386 27 85.7 0 ...........AA...........-..G | ========== ====== ====== ====== ============================ ================================ ================== 9 28 94.1 32 GTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : GTTGGACTGTGAAGTTGATCAAGTTTTTATGTAAGTCACAATAGATTGAAAATGCTTCAACTAAATTGAATTGATATAGAGAGTGAGTCTTATACCAAACCAGCAAATTGCTATCGCCTTTATCATAGATATTTGAGTATGCGTCAATCATATGACATGTTTTGTGAAAAACTTAATTTATTGTTATCCCGCATTCATATTGGTTCTTGAGTGAAACTAGAAGATACTTTTTTAAAAAGCCTTTGGTGTCAATGAAGATTTGTTGTGCCTAAAATGAAAACATAAGTGCCAAGCTGGTAGTGCAAATATTGTCACCCTAGTCTTCGTGAGATGAGCACATGTTCATTTACACTATTATTATTCGGTTTTACCCTTTTTTTTCGAGTATCACTACAGCCCGCATTTTACGTGGGTTTGATATAAGAAAATAAAAAAGCGTATTTATGCTAAAAAGCATAAAAGTTCTTTAATAATCAGATGTTTATTATAGTTTTTGTATT # Right flank : GTAGCAGGTTAGTTGAGTGGCATTCGTATCGCTGCTTGCTAACTGGTGTCTACTGCTAATATTTCCCCTATCGCTTTTTTAATCACAAACTCATGCAATATTTAGTTTTTAAACGCAAAATAAAGCTGATAAATATTCCTAGTATATTGATTTTATTGTATATATTTTTTCAGTTATGTGAATTTCGAGTTAGTGTGATTAGTATTCTATTTGTATTTTAATTAATCCCAAAAAGCCCTAATTTTCTCCGTTCTGAGTAAGGTTTGCGTATTTCTTTCTGGGTAGCCATTGCCCTCAAAAAACCATTATAAAAGTCCGTCGCTAAGTTACTGATTTATAAGGAAATAATTTTTCGACATCGACGGACTTCGAAAGTGGTGCCTAGTAGAGTGAGAGAGAATATAGGGGAGAAGAGAGAATTTGATGCTATGAAGTCCGGGATCAAAAAATAGCCGAAGTCCGCTAAGCCACGCCATTACTAGGCTGTAGCGCGGTGGTCG # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : TTCACTGTCGTGTAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1994032-1994898 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020038.1 Agarilytica rhodophyticola strain 017 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1994032 28 100.0 32 ............................ AAATAATAAAGGTACATCAGTACCAGGACGAT 1994092 28 100.0 32 ............................ ACCTTGATCGAAAAAATTATCGACAAGGAAAC 1994152 28 100.0 32 ............................ TGTGGCGGAGAACGTGTGTCAACTGGTTAGCA 1994212 28 100.0 32 ............................ ACGAACAAAACCAGAAACAACAACATCAACAT 1994272 28 100.0 32 ............................ ATGAAATTAACTACCCATTCTTCGGTCTTAAA 1994332 28 100.0 32 ............................ TTTTGCCGGGTAATAATCTAAAACATCAGCTA 1994392 28 100.0 32 ............................ TTATATACCCCTCTAAAAAGTTGTCGTTATCC 1994452 28 100.0 32 ............................ ATGCTGGGACGAGCACCTACAACAAAAAAATC 1994512 28 100.0 32 ............................ AATGCAGCAGGCTCCAGCACAGCAGCAAGGGA 1994572 28 100.0 32 ............................ TTTACTTGCGGCAAACCTTGCTAGCTGTGGCC 1994632 28 100.0 32 ............................ CTTGAAAGGTGGCAGGAGCCTATAAGAACAAC 1994692 28 100.0 32 ............................ AGGAACATTAGGCATCTGTGAAACTGGAACAG 1994752 28 100.0 32 ............................ AATATAGGGGCGCGCCGGGATAATTACTTTTT 1994812 28 100.0 32 ............................ ATCCCAATCATCGCAGGTTTGTTTTCCCCTTT 1994872 27 92.9 0 A.......................-... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.5 32 GTTCACTGCCGTGTAGGCAGCTTAGAAA # Left flank : AATAGCAGTAATTGAGATTTTGGCTTTCTAGTCGTTTTATTAAAATCCTACAAAATTTTAGCTACTTTAACCTCTAAAATAGTTTTAATTTATAGTATTGCTAAGAAATCTGCATGGTAGGTTGTTGTTTTTAATGGACAATGCCTTTTATAAAACTTAAGCAACGGCCTCACTTATACTCTGGCAGGTAAAGTATCATGCAAATATTGAGGGACTACAGCGTCGTGATGGTTGCTTTCTCGCCTAATTTACTGATTGACCGACCATTAGGTACATGAGTCAATATATACCGTAGAATACATTTGTCAATATTGTCACCCTAGTCTTCGTGAGATGAGCACATGTTCATTTACACTATTATTCGGTTTTACCCTTTTTTTTCGAGTATCACTACAGCCCTCATTTTACGTGGGTTCGATGGAAGAAAATAAAAAAGGGTATTTATGCTAAAAAGCATAAAAGTTCTTTAATAATCAGGTGTTTATTATAGTTTTTGTATT # Right flank : ATGATAGGGTTGCTGAATGATGGCCACATAGTTGTCCACTGAGCAATTGCTATGGTTAATATTTAGTCTTTTCTCTCGAGCTGGAGTGCACTTAATATAAGTTTGTTGCCACTTCCATGCCTAGCAATGACTTAATCACAAACCTATGTGTGATATTGCTTTTATAATGCGAAATAAGGCTGATAAATACTTCTAGTGTATTGATTTTATTATATATATTTTTAAGTTATATGTGCTTTTAGGTAGTGTGATTAGTATTCTATTTGTATTTTAATTAATCCCCAAAAAACCTAATTTTCTCCATTCTGAGTAAGGTTTGCGTATTTCTTTTTGGGCAGCCATTGTCCTCAAAAAACCATTATAAAAGTCCGTCGCTAAGTTATTGATTTATAAGGAAATATTTTTTCGTCATCGACGGACTTCGAAAGTGGTGCGTGGCATAGTGAGAGAGAATATAGGGGAGAAGAGAGAATTTGATGCTTTGAAGTCCGGGATCAAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2626438-2627846 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020038.1 Agarilytica rhodophyticola strain 017 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2626438 28 100.0 32 ............................ TTTGACATATCTCAATGCAGCCAAAAGATCTT 2626498 28 100.0 32 ............................ ACTCTAATGATATCATACCAGAACGTAACAAA 2626558 28 100.0 32 ............................ CGAAAGATAGTATTTCTTTACTTGGACATAAA 2626618 28 100.0 32 ............................ AAACGCATCTATCTCTCCCTGGGGGGCTTCTA 2626678 28 100.0 32 ............................ TACACTATCACTATAATTTCTAAAATCATTTA 2626738 28 100.0 32 ............................ TCGTTGAGTATGAGTAAGTCTTCTCCGTCAGC 2626798 28 100.0 32 ............................ AAGTTAGATAACAACCCTTACTTTCATCGTAA 2626858 28 100.0 32 ............................ ACTAGGAGGCATTGCGTTTAACCAGGGATATC 2626918 28 100.0 32 ............................ CGAGCTAGGAGGTTGATAACACGTAGCGCCTG 2626978 28 100.0 32 ............................ ACCGCGAGTTCCATTACGCGCCGTAAACTCTG 2627038 28 100.0 32 ............................ TATTCGTATGGGCAAAGTGCATTTAGCTCGTG 2627098 28 100.0 33 ............................ CCAAGTGCAAAAGAAATGAACATTACAGACCAA 2627159 28 100.0 32 ............................ CTATAAGAGTAAAGCTTCTATCAGGTTTAGAT 2627219 28 100.0 32 ............................ TATTCTTACTCCTTCTTCTTCAGGTAATTCAA 2627279 28 100.0 32 ............................ TTTACGTTGTGTAGATCATTCAGATGATCGTG 2627339 28 100.0 32 ............................ TTTCTAAAGCGTTCCAATTTTCATGATTTACC 2627399 28 100.0 32 ............................ TTTCGCTGGCAACACCATCCAGCACTCACCAT 2627459 28 100.0 32 ............................ TGACAAAGATGCGTCCTTCAAATCAGAATTTC 2627519 28 100.0 32 ............................ TGACAAAGATGCGTCCTTCAAATCAGAATTTC 2627579 28 100.0 32 ............................ TGACAAAGATGCGTCCTTCAAATCAGAATTTC 2627639 28 100.0 32 ............................ CAGCCAACAGAAAGTCGCATTATCAACGGTTT 2627699 28 100.0 32 ............................ AAGTACGAGAGCCGTTATAAGTAGACTTAGCA 2627759 28 100.0 32 ............................ AGTTGAAATTGACGACGCAATGCTATACGCAT 2627819 28 89.3 0 .....................GA..C.. | ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.6 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : CGTTTGACAAGACTTACTTAGGTAAATATTACGTAATAGAATGTAAATGGGATATATAGAATAGTAGTAACTACGCGGGAATAGCTCAGTTGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCATTTTTCATCACGTCATAGTGTCTTTTTATTCCTTCCTATCCTCTAGAATTATCGACATTTATCTGTTTTTACTCCCTTCATCAGCATTGGCAAAAGTTGGCTCACCATAATTACCATACATTGATCCGCTCCATCAGTATTAAACGCCAAGGTATTCTTTTTGACACCAAAATCAATAGGATAGTCTTTAAAAGATGTCTACTATTGCAGATAGCTTTTGACCCTTTTTTTAGAGCATCGCTACAGGCCGCATTTTACGTGGGGCTAAAATAAGGAAATAAAAAAAGGTGTTTTGGTCGAAAAGCGCAAAAGTTCTTTAATAATCAGATGCTTATAGCTATTTTTATATT # Right flank : ATTATGAGCTTTTACTTAGTTGTACTCAATTGCATACAATTTACACCAGTCGTTGCTGCTGCCTGTCCAGATTTGACTATCGTGCCCGGAAACTTTGACTCGGGCTTTGGCATGATAAGCGGCGAGTATTGCACTAAGATTGGCTTCAAAGCCTGGGTCTGATTTTGCTATCCAATATCCGTAACATTTCTGAGCCGGGTCTTGAACGCTAAATACGACATCTCCACCCCCATGACTATTAAAAGAAATAAATCGGTTAATCGTTGTATTACTACTTTATTCAAGCTCAGCTTGCGCTGCCGCTGATAGCATAAGTAATGTCAAGATAAATAGTTTTCTCATGTTCTTCTTTAGATAGATAACTTTTAAAGATTAAATTCTACAATGCTTTGAGTTTTTAATACCTTCTGAAAAGTAATTGAAGGTTTAGCGGCGTGTATTTTACTTTATGTTGCTTTTCGTGTCAGTTATCTTAGTTGTATGATTTTTAAAATTTAAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 3199316-3202285 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020038.1 Agarilytica rhodophyticola strain 017 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3199316 28 100.0 32 ............................ ATTCGCGTTTGTGGCCTCTGCTATCGTAATTA 3199376 28 100.0 33 ............................ CGGTAATGAATACCGGTAAATTTGCCACAGTCG 3199437 28 100.0 32 ............................ ACAGGGTTTAGCTCACAGACCTTATTAATTAT 3199497 28 100.0 32 ............................ ATTAGTGGTCGTTGTAGTAGAAGAAACAGGTT 3199557 28 100.0 32 ............................ CGTGCAGGATGGAACGGCAAAGACATGTTCTT 3199617 28 100.0 32 ............................ AGATATAAACACAGTTAATAAAACAAATAATA 3199677 28 100.0 32 ............................ AGAGCTTCACGTGGTGGCGACGTACTGCAATC 3199737 28 100.0 32 ............................ ATTCGTTATTTTCACACCGCCAGTTAAGGTCA 3199797 28 100.0 32 ............................ TAATGGCCCTCCCGCGCCACCTATTTGTCAAA 3199857 28 100.0 32 ............................ ATGTGTAAAGAGCTTCTGTAGCCCCAACCACA 3199917 28 100.0 32 ............................ TTAAAAATAAAAGCTACGAACTTGTGTACAGC 3199977 28 100.0 32 ............................ ATTGAAAAAGTCCTGTAACTCTGTTTCATTAT 3200037 28 100.0 32 ............................ ATTCAGAAACCGCAACAGAAAGTTAAGAAAAA 3200097 28 100.0 32 ............................ GCCTCCATACCCGACAGCGTTTTTTTGTTACG 3200157 28 100.0 32 ............................ AACAATGGAGCGTGAAACTTCAGGCGAAAAAA 3200217 28 100.0 32 ............................ TGGCGGTGATTTTAATAGAAGTACCCAAGATA 3200277 28 100.0 32 ............................ AACATCATTTAGTTTCCGCGCAAGGCTTGAGA 3200337 28 100.0 32 ............................ TGCTGATCACTAACCCCATGCAGACGCTCACT 3200397 28 96.4 32 .A.......................... TTTATCATTAACAGCTTCTAGTGATTCCAACA 3200457 28 100.0 32 ............................ GCGCTGACTTGTGGCCTCGCCGCGAATATCCA 3200517 28 100.0 32 ............................ TGGAAACCTTTTACATCTTGATGTGCGTGTTG 3200577 28 100.0 32 ............................ ATGACGAAAATTGCTCCCAGCGTTGACTTACA 3200637 28 100.0 33 ............................ CGTATTCAAAGCAGATGTTTTTAATAGAACTTC 3200698 28 100.0 32 ............................ AGTGGTAGGTGTTCAACGTACGGAAGATAAAG 3200758 28 100.0 32 ............................ ATTGACATAACCGTTAGGCACTCCGCGTGTTG 3200818 28 100.0 32 ............................ ATTAGAGCCTCTCAGCCTTGCTGTTGAGAAAG 3200878 28 100.0 32 ............................ TCTGAAGACTCTGGAGACAACTTTAATGTTTC 3200938 28 100.0 32 ............................ TTGATTGAATGCAATGCCTCCCATAGGCTTCC 3200998 28 100.0 32 ............................ GCTCGAAGAGGAAGTTAGAGCGGGGCTTTTTG 3201058 28 100.0 32 ............................ TTTAGTTGTAATGTCAATTGCTTCATTCACCA 3201118 28 100.0 32 ............................ TTCGCTTCCGCATAGTCTTTTATCCGCGTATC 3201178 28 100.0 32 ............................ GGCGTCTCTCTGAGAGCATTACGCGGCTGGGA 3201238 28 100.0 32 ............................ AGCGGTAAATATTGTTGATGGTAACAGTTATC 3201298 28 100.0 32 ............................ TAATATAAGTATCAATATTTTTGCCGAGATAG 3201358 28 100.0 32 ............................ ATAAGAATGACTCGGCGTAAACGTTGCTTTTT 3201418 28 100.0 32 ............................ ATATCCAAATGTGCGCGATTCTTTTTGGTATG 3201478 28 100.0 32 ............................ TTCATATCAGGTAAGTAGGCACCGATTCCTGC 3201538 28 100.0 32 ............................ TTAACTGAACTCATTCTGAACATGGCGTTTAA 3201598 28 100.0 32 ............................ ACTGGGGCGATTAATGAGCGGTTCAATGAGTC 3201658 28 100.0 32 ............................ TCCACTATATTTCGATATGGATAAGGAGATGG 3201718 28 96.4 32 ................A........... TTAAACGTGGCGTTTGAAGTCCATAGATTTAT 3201778 28 100.0 32 ............................ TAACTTTCCAGTGACAAATACAAAATCCATAT 3201838 28 100.0 32 ............................ CTGCGTAAAACATTAGCATTAAATTGCGTCCC 3201898 28 100.0 32 ............................ CTTGAACACCACCTGGTGTCTTTTTGAAGTAG 3201958 28 100.0 32 ............................ TGGGACGGTTTTTGAGGGTAATCACGCAATTA 3202018 28 100.0 32 ............................ ATCCTTGTAGTTTCCTTATTCTTGCCATGCGT 3202078 28 100.0 32 ............................ CAACTCAGCATTTGATTTTTGAATTAGAGCTA 3202138 28 100.0 32 ............................ TGTACTTCAACACGCGCATCATTTCGTGCGAA 3202198 28 100.0 32 ............................ CGATTGTGCAGTTCGAACACCGGCATTTTGGA 3202258 28 89.3 0 ....................CA..A... | ========== ====== ====== ====== ============================ ================================= ================== 50 28 99.6 32 GTTCACTGCCGCACAGGCAGTTTAGAAA # Left flank : TTCGATTAAGGCTGTGCCAGACAAGGTGGATAAGTTCGTATGTTTTTCACGCAAACAGGTAAAAGGGAAAGCCCGCATTGAAAAAGACATTACACGATCAGCTCAACACCAATCGACAAAGTTTAACCTTCCTTATGAAGAATGTGTGAATACATTGCGAAAAAGGCCAAAAGCCAGCTTTCAAGAAGAGAAACTCCCGTTTATTACTGTTACGAGCTTATCATCAGGTGAGGGTGATAATGGCGCCAAAAACAAGTTTAGACTTTTTATTGTGATGAAAAAGGCGACAAAGGAAAGCACAGGCACCTTTAATTGCTATGGGCTAAGTTCTCAATCAGTGGAAGAAAACGCCAGCGTCCCTTGGTTTTAACCCTTTTTTTTCAAGCATCGCTGCAGCCCGCATTATACGCGGGCTTAAGATTGCAAAATAAAAAAGGGTATTTGGGCTAAAAAGCCCAAAAGTTCTTTAACAATCAGGCACTTAATGTTATTTTTGTATT # Right flank : AAGATGCAGTCTTTATCTACTCGCTATTCCACTAGCATTGGCTGTGTATCGGTAAATAATATATTTTTTACGTGCCTAGGTTTTTAATGGGCAGAAGATAGGAGTATCACTTCCGTGTGATACAACGAGTATGTGTTTGTAAAAGAGCCTTTTAAAAAGGCTCTTTGTAAGAATATACCCGTTAAATAAAAAATGCGTCCTTGCAAGTGTACTAAGAGAATGTAAAAACGTTCTTAATTACGAGGGGATTGTGGTCTATTTGAATTGGTCGCAAATGCTTGGCTAACATTGTTGCTAGCGTTGCCTTCACGGAACATGACAAAACGATCGATACCGTGATCTTTTGAGCGACCAGAGATTTGCACATCGTAAACACCTGCACGATTAAATTGTGCAAAAATGCTGTGGGCGTCGTTATCACTGGTTGATGTGACCCAATTCCAATCCAGTGGCGAACCACCTGAACGGTATACTTTAAACCAGCCATTTGCGCTGGAGCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //